ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976674 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◣ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L2
MTRNR2L8
TMEM199
POLDIP2
MRPL11
GRB7
SLC45A4
ERAL1
RBBP8NL
SFSWAP
C8orf33
MTRNR2L9
UBE3B
KCTD10
RGPD2
RGPD1
POLR3F
DZANK1
MRPL45
PSMD3
POLR2J3
BHLHE40
PGAP3
ERBB2
VIRMA
CRBN
SLC35B1
MIEN1
GRHL2
STARD3
POLR2J
CLPTM1
C1orf174
RBM48
PEX1
POLR2J2
TSR3
GNPTG
TFPT
PRPF31
ATF3
LAMP1
TRMT1
HAGH
FAHD1
STAT6
RAD51AP1
C12orf4
PSMB7
ISY1-RAB43
ISY1
SUPT4H1
LZTR1
IDH3B
VAC14
UNC13D
GATB
TSFM
U2SURP
FLOT2
RBBP5
C16orf91
UBQLN1
LPCAT3
HES1
RRP15
TOMM22
SNRPE
TET3
VPS50
HEPACAM2
STX16
SALL4
PHAX
NAGPA
MTBP
MRPL13
THAP7
SMN2
SMN1
MRPS11
MRPL46
ZNF576
IRGQ
DMAC2
SLIRP
ALKBH1
TBRG4
KRT80
PFKM
SENP1
NDUFB3
FAM126B
SKIL
SOCS2
ELP3
SLC25A53
NDUFA2
IK
SUPT6H
SDF2
NDUFAB1
MRTO4
EMC1
ZNF383
SERP1
EIF2A
SLC25A45
TIMM22
HEXA
YAP1
DNAJC11
TRIB1
ZBTB45
TJP2
TTC31
CCDC142
DDX41
DDX46
TRMO
DDX23
ZNF17
CDKAL1
TFAP2C
SUMF1
SAP30BP
RECQL5
BRIX1
ZNF3
TRAF4
GET3
PCNP
MFSD3
SUPV3L1
UBE2I
GOLM2
LSG1
SUPT7L
SLC4A1AP
LMAN2
ATG14
REEP4
CASC3
STYXL1
MDH2
SRI
ZSCAN25
CHMP7
ATP5MF-PTCD1
ATP5MF
DENR
MED20
BYSL
FAIM
HUS1
GABRR1
ZZZ3
CHRM3
C19orf48
POLR1H
RPS26
SPHK2
RPL18
METTL2A
EIF3H
ATAD2
GTPBP4
TTI1
RPRD1B
WASHC5
NSMCE2
MIEF1
USP30
PSMD1
POMZP3
RPL26L1
NEURL2
CTSA
KRR1
METTL2B
ZC3HC1
TBL1X
MOCS3
DPM1
RAE1
CCDC97
ZNF524
FIZ1
EIF3F
TOP3A
SMCR8
AXL
DIABLO
ZNF579
METTL25
CCDC59
ZGPAT
ARFRP1
ZSCAN22
NFKBIA
SH2B1
MAIP1
MTO1
TUFM
ZNF830
CCT6B
PHF3
VPS33A
ZNF2
DPP3
UPK3BL1
BIRC3
FSCN1
KAT5
DOK7
ECH1
DNAJC30
BUD23
RTEL1
TIMM50
HEMK1
PPWD1
CENPK
SCARB1
MUL1
RPS12
ATP6V0D1
NGDN
PDCD6IP
MAPKAPK5
QRICH1
RAB3IP
FAM133B
SEC13
PRR3
GNL1
RPL23A
GCN1
RCE1
ZNF335
PAXBP1
TRIP4
NVL
ERGIC2
DLC1
GFM1
TXN2
MTX1
GTF2H3
EIF2B1
TIPARP
WDR18
BNIP1
PHB2
PNO1
MBD6
NUP214
LRRC29
BMS1
RWDD1
COQ8B
ZFP64
PGGT1B
TAS1R1
NOL9
SMG7
SETD3
CCNK
SPNS1
ZNF408
ARHGAP1
LANCL2
GTF3C5
COLEC11
BRF2
SYT12
FOCAD
RXRA
URM1
SKIDA1
ASB6
YJU2
CDK12
HSPBP1
FCF1
AREL1
PBX2
USP39
TRMT2A
RANBP1
EIF1AD
BANF1
SYT1
GLCCI1
RBM42
PSME3
TSN
LMNA
TMEM101
PRKG2
KAT8
SEMA3B
EIF3E
MIDEAS
HCAR2
TJAP1
MRPL1
COASY
TBL1XR1
DGAT2
SF3B3
COG4
RRNAD1
ISG20L2
UPK3BL2
SEMA4B
MRPS34
EME2
PDAP1
BUD31
EIF5A2
PLAGL1
PUS10
PEX13
S100A2
KCTD11
CDK5RAP2
AURKAIP1
ATP6V1C1
PSMG2
CEP76
PDE12
MED6
WDR72
MRPS7
GGA3
MAP3K7
VPS11
POLR3B
UTP20
MACROD1
EXOSC5
BCKDHA
CLPB
PMPCA
ENTR1
C5orf51
GPATCH3
ADGRL1
NUDCD3
NDUFB5
MRPL47
DNAH5
WDR53
FBXO45
PRSS22
GRK7
UBXN1
BLOC1S1
TTC32
FAM162A
CCDC58
MRPL21
IGHMBP2
FIS1
ANXA3
MYL12B
FOXA2
FLOT1
LIMA1
DHRS13
BIRC2
ZNF165
STX6
TNFRSF12A
MRPS22
DHX35
MED4
OAZ3
TBL3
TARS2
TCERG1
NME1
ABCB8
CDC23
RINT1
PES1
PPP1R37
KLK6
CDK5RAP1
TMEM123
MRPS26
CNPY2
GRWD1
RPL30
SSNA1
ANAPC2
SLX4IP
PWP1
ZCCHC4
KMT2D
TAGLN2
ZRANB2
YIPF3
POLR1C
TMCO1
SNRPB
MAD2L1BP
GTPBP2
EVPLL
HR
PHF5A
ACO2
KMT2A
SETD1A
VWA7
LRFN4
TSC1
GFI1B
CDK11B
CDK11A
RTF2
FEM1A
SNRPB2
CD63
MRPS15
SEPTIN9
AAAS
DHRS3
RPL7L1
TBC1D17
AKT1S1
NDUFA10
WASHC1
EIF2S1
ATP6V1D
INTS1
COPS7B
ANAPC5
RASEF
ADPRS
MCC
MDGA1
GTF3C3
PIK3C2B
IPO11
SLC25A11
RNF167
TXNL4B
DHX38
PEPD
BCL3
RARS1
FAM83A
TIMM23
PNKD
TMEM203
NDOR1
KMT5C
PPIL3
NIF3L1
COG2
CCNT1
NCBP2AS2
NCBP2
LTO1
RPS14
DUS2
DDX28
UQCRQ
GDF9
DDX49
COPE
CTTN
TRIM4
DYNC2I2
SBNO1
MED1
GSN
DNTTIP2
RBX1
NPAS1
HTRA2
ISG20
SLC7A6OS
PRMT7
MINK1
COX16
ASH2L
NOP53
MTHFR
CLCN6
SART3
ISCU
CSTF1
AURKA
TMEM41A
PFDN1
PNMT
SEMA6A
LRRC23
PCID2
CUL4A
TAF6
CNPY4
WDR46
PFDN6
AP5Z1
METTL1
EEF1AKMT3
LRRC46
MED23
MAF1
COPS8
RPS21
PSMD5
HSPA9
PTPN12
MRPL40
HIRA
ACP3
PTP4A1
TPRKB
MAN2C1
TPD52L2
CWC25
PSMC3
MAGOH
ADPGK
ZMAT2
MRPL48
STK36
RNF25
LIF
NUDT5
CDC123
KRT17
FADD
SRP68
TGIF1
KPTN
ZNF16
SRD5A1
NSUN2
LONRF3
SSBP1
MCM7
AP4M1
GUCA2A
JADE2
TRMT112
PRDX5
CWF19L1
C6orf226
MB
NR1H2
METTL7A
SNX16
TMPRSS4
LGALS8
ERCC5
UTP3
CCAR2
RAB5IF
C15orf62
GTF2H2
XPC
LSM3
FOS
WDR24
SMG5
TTC6
SKIV2L
NELFE
FOXA1
PARP4
EPS8
SREK1IP1
CWC27
PRR12
NDUFA4
ZNF292
MRPS35
SPRYD4
RBM39
TINAGL1
SNRPD2
QPCTL
PFDN4
TGFB1
PPIH
UNC50
COA5
TAF2
ARL8B
XAB2
TBCB
POLR2I
ZNF302
ZC3H3
SRSF11
LRRC40
TIPIN
GPRC5A
UPK3B
ELAPOR2
EIF3D
PMEPA1
SNRNP70
WBP4
ELF1
TBC1D23
SH2D4A
TOMM6
MED30
SSH3
UBE2L3
SEC61B
RNF39
AAR2
ZNF384
TRIM31
ZNF561
EIF3K
UBE2M
COMMD5
TRIAP1
PRKAR1A
RBM22
NDUFB7
SPDYE14
SPDYE10P
CASTOR2
SLC24A1
RNF40
CCDC189
S100A6
RNF19A
HSPB1
ARFGEF2
ZG16B
SMIM10L1
PRH1-TAS2R14
PRH1
CCDC169-SOHLH2
CCDC169
ZNF749
GFM2
GALK2
COPS2
MRPL30
MITD1
MRPL12
MEGF8
HMGA1
TOR1A
TMEM40
ATAD5
TMEM245
GTF2H4
SYNCRIP
LIN52
ALDH6A1
ALDH18A1
HNRNPA2B1
CBX3
SLC39A10
GET4
WDTC1
EPC2
DDX17
EIF4G2
STRBP
NUDT3
WASHC2A
SLC25A25
NAIF1
GABARAP
SEPTIN7
WASF2
WASHC2C
UBE2Q1
GPR137
CDK4
BAD
GSK3B
RSF1
AAMDC
MSMO1
RPGRIP1L
FTO
DAGLA
MDM2
FAM72D
FAM72C
CUTA
RPUSD4
FAM118B
CLCN7
SMARCD2
USP49
DDX42
CCDC47
SRSF1
ILF3
SERPINI1
PDCD10
COMMD9
GBA
ATP6V1G1
MAN1B1
SLC35A5
ATG3
OSGEP
APEX1
UVRAG
FANCA
MCOLN1
RAD9A
XPO7
WDR74
CLN3
HPS5
GTF2H1
INO80C
FAM72A
AMDHD2
CEP162
MFSD1
PPP6R1
DVL2
SLC4A2
ZDHHC6
VTI1A
WWOX
EIF2D
PMS1
ORMDL1
CCDC200
PCIF1
UBE2B
CDKL3
PIP4P1
INTS10
GP1BB
E2F6
ZNF668
WBP2
ARHGAP32
MEMO1
UBE3C
NUP107
MOB1B
MEF2C
KANSL3
PTBP1
TNC
HNRNPH2
GLA
ITGB3BP
EFCAB7
KCNMA1
UBAP2L
C1orf43
PASD1
WDR62
THAP8
TPP1
SUMO3
SH3GL1
SLC33A1
THRAP3
CLSTN1
ST7
RPTOR
ANKS6
HM13
SPATC1L
DAZAP1
NDUFS7
MIER1
SUSD4
XRCC5
TBC1D30
GNS
SLK
CACTIN
ADGRB3
FGGY
TMEM116
ERP29
ALG6
SHLD2
GLUD1
SUMO2
NOP16
HIGD2A
SCAMP5
DICER1
ZNF497
ADAM23
DUSP6
BAX
OTUD7A
TNPO3
KDM3A
PDE4DIP
NOL8
CENPP
TRUB2
COQ4
ARID5B
RMND1
ARMT1
FAM72B
SMARCA4
SF3A3
ZNF507
PRMT3
RABGAP1L
KDM1A
BLOC1S4
RALGDS
NPEPPS
STAU2
STRA6
HDAC6
MYCL
BAG6
APOM
ACVR1B
NEXN
RRAGC
TMEM18
SBK1
LARP1
SMG8
SCYL3
PRAME
AP2A2
PPP5D1
NSD1
CALM3
KMT5B
KDM4C
TMEM59
TCEANC2
MYL12A
TFDP1
HOOK2
GRHL1
ZNF33B
HOXC13
PRKCA
LUC7L2
CAPRIN2
SFXN1
KLHL12
BRPF1
MAN2A2
KDSR
PEAK1
HMG20A
NFU1
KDM7A
NUF2
CENPBD1
NAPA
NSF
RNASEK
SAP30
BACH2
FLYWCH1
TM2D2
ADAM9
CBX7
ATP6V1H
RPS11
FBXL3
DIP2A
AFF4
NOTCH2NLC
MINDY2
DNAJB12
JMJD1C
CHD7
WWP1
USP28
FASN
UBE2E2
AIFM1
CACNA2D2
SPTAN1
RFX1
VPS52
RPS18
ETV4
PLEKHF2
FMC1-LUC7L2
FMC1
RCHY1
ABT1
CCDC174
WBP1L
PRPF6
SYT7
SUGCT
MPLKIP
ACTN4
RBPJ
DTNB
PHF21A
FAM222B
CFAP206
CUTC
COX15
C17orf58
RPL5
PRKCE
ZNF609
MSS51
DNPEP
COMMD2
ATG101
FCHSD2
PTK2
PATZ1
C1QTNF1
MAP3K1
MARCHF2
IKZF2
PHIP
FAM98B
COMMD4
IFT140
CRAMP1
TMEM242
NDUFA9
AKAP3
IGF1R
REXO4
OXNAD1
DPH3
KAT6A
LRRC47
ATXN7L2
GOLGA3
RBKS
BABAM2
TRIQK
EIF4A2
ZMPSTE24
LASP1
LAMTOR1
UBXN2A
FRMPD1
PXT1
KCTD20
GOSR2
TAOK1
NFASC
KLHL32
CHD1
CD55
CCNI
BSG
PSMA1
FZR1
USF2
CSTF2
TMEM167B
GTF2IRD2
UPF1
CRKL
ATXN7L3
ZBTB18
CHIC2
RPS9
SCAF11
EIF4H
OPA1
PMPCB
OAZ1
ADCY9
PKP2
PTPRG
LYPLAL1
CMIP
TEFM
OBSL1
IRF2BP2
INHA
SPRTN
EXOC8
REXO1
VGLL4
PPP2R5A
LCOR
EFNA3
ALKBH3