ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930121 | Acute myeloid leukemia
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◣ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX20532176: hESC H1

◢ SRX20532177: hESC H1

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

HEXA
WASHC2C
WASHC2A
AP5Z1
LAMP1
COMMD9
GET4
FIGNL2
RAD9A
KAT5
UBE2Q1
ATP6V0D1
CYB561
RNF149
MTHFR
CLCN6
SPNS1
MCOLN1
HELZ2
BPI
GPR132
BAX
CLCN7
LUZP1
AOAH
NFX1
CCL4L2
LST1
RPS6KA1
MTRNR2L2
MTRNR2L8
MRPL11
GRB7
ALDH18A1
HNRNPA2B1
CBX3
SLC39A10
WDTC1
SLC45A4
EPC2
DDX17
EIF4G2
STRBP
NUDT3
TMEM199
POLDIP2
SLC25A25
NAIF1
GABARAP
SEPTIN7
WASF2
MRPL45
ERAL1
NEURL2
CTSA
SFSWAP
GPR137
CDK4
BAD
POLR2J3
HAGH
FAHD1
GSK3B
NAGPA
RSF1
AAMDC
SPATC1L
MSMO1
CRBN
RBBP8NL
UBE3B
KCTD10
RGPD2
RGPD1
RPGRIP1L
FTO
TRMO
RBM48
PEX1
MTRNR2L9
GRHL2
PSMD3
DAGLA
MTBP
MRPL13
MDM2
FAM72D
FAM72C
SUMF1
SKIL
RAE1
SLC35B1
CUTA
STARD3
RPUSD4
FAM118B
C8orf33
TOMM22
SMARCD2
USP49
C1orf174
SUPT7L
SLC4A1AP
DDX42
CCDC47
SRSF1
TBL1X
ISY1-RAB43
ISY1
ILF3
TRIB1
POLR3F
DZANK1
SOCS2
RBBP5
HES1
SERPINI1
PDCD10
STX16
GBA
ZZZ3
STAT6
TSR3
GNPTG
LZTR1
ATP6V1G1
VPS50
HEPACAM2
MAN1B1
THAP7
UNC13D
BHLHE40
VPS33A
PGAP3
ERBB2
MIEN1
YJU2
ZNF335
POLR2J
SLC35A5
ATG3
OSGEP
APEX1
TRMT2A
RANBP1
METTL25
CCDC59
PDE4DIP
IDH3B
PSMB7
UVRAG
SUPT6H
SDF2
FANCA
CLPTM1
AURKAIP1
SUPV3L1
GOLM2
TFPT
PRPF31
SNRPE
SMN2
SMN1
BLOC1S1
DMAC2
VIRMA
TET3
RPS26
C5orf51
SALL4
WASHC5
NSMCE2
TBRG4
ATF3
ZNF408
ARHGAP1
MOCS3
DPM1
XPO7
WDR74
SLC25A53
MRTO4
EMC1
NUP214
PDAP1
BUD31
SRI
NME1
YAP1
POLR2J2
CLN3
TSFM
GET3
HPS5
GTF2H1
TOP3A
SMCR8
PAXBP1
PFKM
SLC25A45
CDKAL1
INO80C
FAM72A
CASC3
ATP5MF-PTCD1
ATP5MF
AMDHD2
SAP30BP
RECQL5
CEP162
TRMT1
SLIRP
ALKBH1
MFSD1
FLOT2
PPP6R1
DOK7
ZSCAN22
U2SURP
ZNF165
DVL2
ZNF383
SENP1
AXL
CDK12
ZSCAN25
TAS1R1
NOL9
SLC4A2
C16orf91
FLOT1
ZDHHC6
VTI1A
GATB
ZBTB45
WWOX
DDX41
ATAD2
NDUFA2
IK
EIF2D
SMG7
GFM1
PMS1
ORMDL1
KRR1
CCDC200
RTF2
NDUFA4
VAC14
SLC25A11
RNF167
PCIF1
MRPS15
KCNMA1
PLAGL1
UBE2B
CDKL3
KAT8
TBC1D30
PIP4P1
FAM83A
PHAX
DNAJC11
RAD51AP1
ECH1
C12orf4
INTS10
GP1BB
E2F6
ZNF576
IRGQ
ZNF668
WBP2
SSBP1
ARHGAP32
MEMO1
UBE3C
NUP107
CCDC97
MOB1B
SUPT4H1
MEF2C
UBE2I
HUS1
RRP15
NGDN
CCNT1
SUSD4
KANSL3
PTBP1
PSME3
TRIP4
TNC
HNRNPH2
GLA
ITGB3BP
EFCAB7
SEMA3B
UBAP2L
C1orf43
PASD1
USP30
PPWD1
CENPK
WDR62
THAP8
MRPS7
GGA3
TRAF4
UBQLN1
TPP1
TJP2
LIMA1
BIRC3
SUMO3
SH3GL1
SLC33A1
THRAP3
GPATCH3
LANCL2
SEPTIN9
CLSTN1
ATG14
EIF5A2
ST7
RPTOR
DHX35
ANKS6
ELP3
EPS8
HM13
ZNF2
DAZAP1
RFX1
NDUFS7
MIER1
TXN2
XRCC5
GNS
PSMD1
SLK
LRRC29
CACTIN
ADGRB3
DENR
LPCAT3
DHRS13
VWA7
FGGY
RTEL1
MRPS11
MRPL46
MAP3K7
TMEM116
ERP29
ADGRL1
ALG6
SHLD2
GLUD1
VPS11
SUMO2
NUDCD3
ABCB8
NOP16
HIGD2A
AAAS
SCAMP5
LSG1
OAZ3
TIMM23
TSN
DICER1
ZNF497
ADAM23
DUSP6
DDX23
OTUD7A
FAIM
TNPO3
ZNF524
KDM3A
FIZ1
NCBP2AS2
NCBP2
LMAN2
RXRA
SH2B1
NOTCH2NLC
NOL8
CENPP
TRUB2
GPRC5A
COQ4
ARID5B
RMND1
ARMT1
FSCN1
ZCCHC4
EIF3F
BMS1
PSMD5
DGAT2
REEP4
FAM72B
TMEM40
SMARCA4
METTL1
EEF1AKMT3
EIF1AD
DPP3
BANF1
SF3A3
SPHK2
RPL18
DDX46
STX6
ZNF507
NDUFAB1
KRT80
DNAJC30
BUD23
PRMT3
RABGAP1L
QRICH1
DHRS3
SERP1
KDM1A
EIF2A
SYNCRIP
BLOC1S4
TCERG1
LTO1
RALGDS
NPEPPS
ATP6V1C1
STAU2
TIMM22
STRA6
UBE2L3
HDAC6
MYCL
PUS10
PEX13
BAG6
APOM
ACVR1B
NEXN
METTL2A
PDCD6IP
SART3
RRAGC
ISCU
TMEM18
SBK1
UPK3B
TMEM203
NDOR1
EIF2S1
ATP6V1D
LARP1
COPS7B
SMG8
NFKBIA
SCYL3
PRAME
AP2A2
ZGPAT
PPP5D1
NSD1
CALM3
ARFRP1
KMT5B
KDM4C
TTC32
RBM39
TMEM59
TCEANC2
TFAP2C
MAIP1
MAN2C1
CHRM3
MYL12A
TFDP1
HOOK2
ZNF830
CCT6B
CHMP7
STYXL1
MDH2
COX16
FEM1A
GRHL1
ZNF33B
NDUFB5
MRPL47
HOXC13
PRKCA
COLEC12
LUC7L2
GTF2H4
FOS
CAPRIN2
SFXN1
KLHL12
EIF3H
LRFN4
BRPF1
PSMG2
CEP76
MAN2A2
KDSR
PEAK1
HMG20A
NFU1
KDM7A
NUF2
CENPBD1
NAPA
METTL2B
NSF
BNIP1
RNASEK
LRRC23
SAP30
NVL
BACH2
FLYWCH1
DNAH5
TM2D2
ADAM9
MAF1
HSPA9
CBX7
ATP6V1H
RPS11
FBXL3
DIP2A
AFF4
INTS1
SP2
MINDY2
DNAJB12
RPS14
KMT5C
JMJD1C
CHD7
CSTF1
AURKA
WWP1
LRRC46
NOTCH2NLB
NOTCH2NLA
USP28
FASN
UBE2E2
SF3B3
COG4
AIFM1
SLC24A1
CACNA2D2
SPTAN1
HSPBP1
RAB3IP
S100A2
FAM133B
HERC5
VPS52
RPS18
ETV4
SEC13
PLEKHF2
C3orf70
FMC1-LUC7L2
FMC1
RCHY1
GABRR1
GTF2H3
EIF2B1
FRMPD1
ABT1
CCDC174
WBP1L
GTF3C5
PRPF6
SYT7
SUGCT
MPLKIP
ACTN4
WDR53
TSC1
GFI1B
FBXO45
TTC31
CCDC142
BRIX1
RBPJ
DTNB
XAB2
PHB2
PHF21A
GFM2
FAM222B
CFAP206
KMT2D
SSNA1
ANAPC2
URM1
CUTC
COX15
SNX16
PRR3
GNL1
C17orf58
MB
UTP3
RPL5
PRKCE
ZNF609
MSS51
MRPL1
COASY
ZNF17
ZNF3
DNPEP
RWDD1
FAM162A
COMMD2
CCDC58
ATG101
FCHSD2
PTK2
BIRC2
PATZ1
C1QTNF1
RPL23A
MAP3K1
MARCHF2
CCAR2
IKZF2
PHIP
FAM98B
COMMD4
TBL3
GCN1
ZC3HC1
TIMM50
MINK1
IFT140
CRAMP1
TMEM242
NDUFA9
AKAP3
IGF1R
REXO4
OXNAD1
DPH3
KAT6A
PTPN12
LRRC47
ATXN7L2
GOLGA3
PES1
RBKS
BABAM2
MED23
TRIQK
RCE1
MRPL21
IGHMBP2
EIF4A2
ZMPSTE24
LAMA3
EXOSC5
BCKDHA
LASP1
LAMTOR1
CNPY2
UBXN2A
PXT1
KCTD20
GOSR2
TAOK1
NFASC
KLHL32
CHD1
NDUFB3
FAM126B
CD55
CCNI
BSG
PSMA1
FZR1
MAPKAPK5
PNO1
USF2
CSTF2
TARS2
TMEM167B
PRSS22
GTF2IRD2
UPF1
CRKL
ATXN7L3
DIABLO
ZBTB18
ERGIC2
CHIC2
TAGLN2
HR
RPS9
ANKZF1
SCAF11
MED1
EIF4H
COLEC11
OPA1
TMEM41A
PMPCB
OAZ1
ADCY9
ZNF292
TIPARP
PKP2
PTPRG
LYPLAL1
CMIP
TEFM
OBSL1
IRF2BP2
INHA
SPRTN
EXOC8
REXO1
ELAPOR2
VGLL4
PPP2R5A
LCOR
EFNA3
ALKBH3
BHLHB9
SLX4IP
MTIF2
SGO1
PPP1R37
KLHL22
MAGOH
LYPLA1
CFAP36
CABIN1
SEMA5B
ERCC6L2
MELK
EVPLL
ZBTB14
TM9SF4
ARMC8
ZNF217
CCDC88A
VILL
SRSF11
TXNL4B
DHX38
AUTS2
RBM14-RBM4
RBM14
PVALEF
AATK
ALG14
C12orf66
SYT12
MED20
BYSL
TIMM23B
PARG
ORAI3
MAZ
RAB5B
HEMK1
GTF2A1
GFER
NCAPH2
LMF2
AMOTL1
GAB2
GSDMD
RPL7L1
RPS12
IQCG
CHEK1
COMMD8
NFE2
MCM7
MAST2
AP4M1
MRFAP1
DOHH
FZD1
GNB1
SRSF6
SGTA
PKNOX1
PEPD
SREK1IP1
RYK
CWC27
ELP5
CTDNEP1
TENT2
SEC61B
PDE12
CTBP1
YTHDF2
STAT5B
LIFR
PTBP3
MRPL27
EME1
MRPS33
MLLT10
SPPL3
CIC
MAPT
C19orf48
THAP1
NDUFS3
KBTBD4
DUS2
DDX28
RBM19
BRWD1
SLPI
GTPBP4
MAPKAPK3
COPS4
TPD52L2
EFTUD2
CCDC103
BRF2
CACYBP
TJP3
CBWD5
SLC30A4
RBM28
PIK3C2B
MRPL48
SSBP2
UBXN4
PHF3
ZRANB2
GRWD1
PRKG2
ZFYVE26
SLC35A4
APBB3
SYT1
PARD6B
TRAPPC2L
GALNS
TOR1AIP1
MRPL53
ZNF451
NXT2
GLCCI1
MTF2
PNKD
MED6
PLSCR1
CBWD3
SMURF1
MRPL40
HIRA
CBX6
BBS1
PALB2
NUDT5
DCTN5
CDC123
FEZ1
CAPS2
BMI1
KIAA1586
NEK6
POMZP3
PIK3R3
ATOH7
ARPC2
IPO11
FUT10
NR4A1
SETD3
CCNK
C20orf141
ADARB1
PWP2
LRRC40
LOC102724159
KLK6
RUVBL1
DUS3L
EMC4
WDR89
TRIM37
NF2
PTP4A3
PHF12
CWC25
WDR24
PROSER1
NHLRC3
RNFT1
RABEP1
PAFAH2
SNRPC
SNX19
SLC6A6
INKA2
DDX20
APBB1
AMMECR1
RNF39
AVEN
TMEM266
KLF16
BTBD3
CBLL1
EXOC6
ATP6V0B
ZCWPW1
MEPCE
HHAT
ATF6
CALM2
DPP9
PHF5A
ACO2
MRGBP
LFNG
GSN
CEP43
CCDC124
GNB2
FBXL5
ASCC1
ANAPC16
ACACA
RUFY1
PIH1D2
OPRD1
NKAPD1
SKIDA1
NCAPD2
MRPL51
TCTA
RHOA
FAM174C
RNF187
GYPB
TMEM248
RALGPS2
P4HB
SNX12
MYOG
CASS4
PSMC3
FHL2
TCP11L2
PFDN4
PPIH
H4C4
STAM2
C2CD5
GPSM1
YEATS2
SRCAP
PCID2
LOC730183
EML2
CUL4A
PXN
H4C14
THOC1
NR1H2
HNRNPU
ZAR1L
BRCA2
ST8SIA1
SGPL1
DNAJB2
ZC3H7A
SULF1
ACP3
MRPL54
CCNG2
ULBP1
RASEF
ZNF561
TMCC1
EIF3K
CDC23