ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10407083 | Esophageal squamous carcinoma cell line
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◣ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
SINHCAF
NDUFB5
MRPL47
MTF2
FUZ
FAM227A
CBY1
PTMA
PLPP2
CLCF1
HMGB1
TGIF1
FBXL19
NOTCH1
ZSCAN2
WDR74
NDST1
DST
PTPRH
IQCH
AAGAB
VAMP5
PUS10
GLI2
KMT2B
ERGIC2
LYPD1
CEP63
ANAPC13
DNM1L
MYL12A
F11R
VOPP1
CPNE2
SRI
DDX17
GPR39
WDFY2
H4C14
HGS
ARL16
CHD6
SYBU
KRT6A
DPP3
GRK6
ITPRIP
NEBL
ISL2
CNP
CFL1
OGA
SPRY4
MCM7
AP4M1
FGF19
FAM220A
SLC33A1
ST8SIA1
PHF5A
ACO2
ANKRD65
IFRD1
ARIH1
HIPK1
RHOBTB2
MCCC1
HSD17B3
GFM2
KRT15
ZFC3H1
THAP2
NDUFS5
PIF1
H4C15
PSME3IP1
RSPRY1
TNFRSF21
AMN1
DCLRE1B
AP4B1
ITGB1
SPHK1
NDE1
MEF2C
CCDC88A
DAPP1
ZNF428
ALDH7A1
OGT
H3-3B
ACP3
TINAGL1
SLC12A7
DNAH5
DCTN1
NTMT1
G3BP1
TPRKB
TMCC1
MRPL21
IGHMBP2
RTBDN
SLC25A11
RNF167
ZNF37A
VASH2
CCL26
SPINT1
TNFAIP8
TLX3
PTCHD4
CDK12
IPO4
MYL12B
EGFR
RBM39
HDAC9
WBP11
C12orf60
NPIPB12
CUEDC1
CAPRIN1
TJP2
COPS7A
SIX2
MAP3K9
TSNAXIP1
RANBP10
NCBP2AS2
NCBP2
FZD1
ACTR1A
OARD1
NFYA
GET3
SVIL
NR1D1
MUS81
RASA3
ESRP1
KDM2A
SMC4
IFT80
GDF5
CEP250
RAB5C
KDM3A
PIK3C2G
TTF2
HNRNPC
SLC25A45
SLC16A13
OAZ2
TOMM40L
OLFML3
SLC39A12
TIA1
NUP160
JUP
CNIH4
RAPGEFL1
SPATA12
SLC22A23
TMUB2
KNTC1
TBC1D17
AKT1S1
NDUFS2
HNRNPDL
ENOPH1
RPS6KB2
EMC9
RBBP8NL
SHF
AADAC
KPNA4
TMEM41B
ZSCAN9
PDIA4
KLHL24
CD2BP2
SH3GL3
VGF
EIF1AD
BANF1
SPRED2
ZNF195
POLG
POLDIP3
G3BP2
C2CD5
EXPH5
ETV1
CFAP20
KRTAP3-1
ZNF775
SOX6
PLEKHG1
C11orf58
CYTH2
MTRNR2L8
BORCS6
BCAS2
ING4
ZNF785
SPAG4
LGALS8
H4C12
LDHB
NCOA4
PGBD2
CTXN3
PIN4
ZBTB6
SUN1
CCDC30
CSDE1
NEK10
FAM83B
DHX8
PSMD3
YLPM1
WDR36
CEP170
SDCCAG8
SFPQ
MTRNR2L2
ZNF106
RNF43
SIRT4
KLK6
UBR2
KSR1
MSANTD4
INTS9
HMBOX1
ZCCHC14
LNX1
YARS2
NDUFS8
TBC1D31
EIF3E
IL31RA
TUBB8
LRRC23
GBA
H4C9
FGF1
ATG2A
TOMM40
PCCA
NCEH1
WBP1L
RPL27
HSPA13
WDR33
ZNF268
CWC22
AHNAK2
SART1
CDK5RAP2
PGM2L1
MIA3
DIABLO
NPIPB6
UFD1
CDC45
NFE2L2
ANKRD36
NUDT19
HSPH1
UQCRQ
GDF9
CCDC146
PHB2
COMMD2
ADGRF4
SRP54
VWA5B2
ZCCHC8
TRIP4
NPDC1
TUT1
KBTBD6
CCT2
PIK3R3
KIAA0895L
ATAD2
NDUFS7
PRORP
PPP2R3C
MAP3K7
SLC25A32
DCAF13
DDX5
PARP2
EGR3
HEXIM2
CLCN3
YWHAG
PRMT5
GSN
H2BC8
H2AC8
DAD1
MRPS23
EMP1
GOLGB1
TRDMT1
COX7B
PUS7L
IRAK4
RFFL
COX8A
FOXA1
SMPD3
PLK3
BAZ1B
MTA3
KCNG3
C11orf65
GCDH
H4C3
CREBL2
ETV4
C12orf57
NKIRAS1
REST
SACS
OTX2
PIPOX
METTL11B
DNMBP
NRG1
OBI1
PRICKLE1
SRRM4
SNRPN
FLAD1
MED12
HESX1
MOBP
VENTX
TDGF1
NADK
PMEPA1
WFDC8
PSMD9
HPD
ZNF343
SNX16
FGD4
CER1
IER5L
CELF3
DNMT3B
GADD45G
DAGLB
ADAM28
ARID2
NANOG
FBP1
LIN28B
PPP1R16B
RIF1
GIMAP5
KIFBP
FBXO40
FZD2
CCDC169-SOHLH2
CCDC169
LRRTM3
SPIC
JPT1
PDPN
USP44
ZNF532
PDCL
CDC14B
SLC2A14
FGFR2
CEP41
GPSM3
TUBB
DHX32
DGLUCY
GDF3
LRRTM4
BFSP1
TIMP4
SFRP2
RFX4
EEF1A1
TES
ADA2
TNRC18
FOXP1
CARHSP1
ZNF304
SASH1
DUSP12
AK4
WDR49
DDX3X
AHCYL2
TBC1D16
UGT1A6
TNC
FAM120B
SNAPC3
WNT5B
ACVR1
ANK2
MACROH2A1
VANGL2
CAMTA1
C20orf96
ST18
SLC7A5
AASDH
SGMS2
PITPNM2
AUH
KCNN2
SRSF7
PXMP4
KLF7
SLFN12
DPPA4
CCDC92
PRRC2B
SLC25A36
CCN2
FOXO6
GCNT2
NRCAM
STMN1
CFLAR
MARCKS
CDH10
PGK1
DISP3
TESK2
BRINP2
DACT3
KLF5
OSBPL1A
EPB41L1
CNGA1
ETV6
DICER1
CELSR3
KCNIP4
F11
TRMT2A
RANBP1
SYNCRIP
PALM2AKAP2
RGS3
TACC2
SLCO5A1
ACSL1
LINGO1
ZBTB45
POLB
RASAL2
MBOAT2
UBQLN4
CD200
ZNF202
HMGN1
CTNND2
ANAPC15
HOXB1
ERMN
C22orf39
LAMTOR2
HES5
CSRNP2
LIN28A
PPP1R18
SMAD3
ARHGAP42
ESRRA
TIAL1
GEMIN7
LLGL1
DCLK1
SMARCAD1
GADD45A
WASF1
CDC40
VEZT
FGD6
PLCH1
CCL2
FAM153B
CAAP1
DET1
CNR2
TCHP
ARID5A
SLC10A2
RNF213
CTTNBP2NL
RAB30
PPME1
C2CD3
PLAGL1
SP5
ZFYVE1
SET
C1R
CHN2
EMSY
ZFAND3
RAD54B
IFIT3
THEM4
DHRS3
CCDC167
YEATS2
IL17RD
PWWP2A
PES1
ST6GAL1
ETFB
STK32C
LRRC27
KRT8
PCYT1B
NEDD9
ZNF627
AKIRIN1
LIMCH1
ZBTB40
E2F7
ZDHHC5
SAXO1
RRAGA
ZSWIM4
RNF19A
TRPM3
PCDHB8
MDK
AFF1
ZNF318
TMEFF1
ZBTB8OS
RBBP4
FAT1
ADRM1
ACCS
RGPD2
RGPD1
MANSC1
FAM181A
TRIM22
JAG1
SMIM14
MOSPD3
ARF4
TCN2
ABCB8
EP300
FSBP
ATAT1
IPO11
HLTF
CNN3
GSPT2
PDE4D
SYAP1
TMEM114
IL23A
CNKSR3
SYNPO2
ZNF358
YWHAQ
CCDC200
RBBP6
HBP1
LPCAT4
PSMB7
ZNF469
ADAR
ZCCHC12
SPAG9
PCDHB5
STOX2
SENP8
MYO9A
DTNA
ADNP
ESR1
C1orf127
NFE2
DERA
BBS7
TSGA10IP
CLEC9A
EXOC5
AP5M1
CPVL
AKAP9
IP6K2
FILIP1L
SPHK2
TRAK2
STRADB
LPP
SYTL2
ZNF763
AMOTL2
SLC2A11
RRBP1
PELI1
INKA2
HIP1R
MMACHC
SLCO4C1
HACL1
BTD
DLG2
TCF4
MMP10
H2AZ2
PDP1
TMPRSS7
DLX5
KLHL4
RSF1
AAMDC
RSPH14
RASSF8
ZNF254
TFDP2
CDK5R1
CCDC130
SCOC
CALD1
HEBP2
METTL7A
PIMREG
ZNF649
GALNT8
RIMBP2
POLR3E
ABAT
MAP2K5
SMARCB1
BLOC1S4
PAIP2
GFRA1
PCDHB13
PER2
PBLD
HNRNPH3
SUCLA2
RBMX
PCDHGC4
GRHL2
DPPA2
PYDC5
MTRNR2L9
IFI16
PTGS1
ELOVL5
ZNF506
STAG3
GPC2
PKNOX2
SOX5
PTCD2
MRPS27
KLHL5
PRR5L
KLF17
PROM1
NASP
RCOR1
RIMKLB
CCNG2
BCL9
TLE3
LCOR
ZNF608
AFAP1
INSM1
PAG1
SNX27
KIF21A
ARHGEF37
CHD8
DNM2
PDE4B
HNRNPUL1
LOC389199
MRGPRX3
SDHD
ID1
HEXIM1
ZBTB18
ERBB2
GXYLT2
TSPAN19
LRRIQ1
BTBD3
CHMP7
IREB2
USP53
PACRGL
LTBP1
ZNF180
PRM3
CDH6
SHROOM3
RAB4B
PNRC1
TUT7
BCAT1
CYP4F11
PAXBP1
CTH
RAB34
TAX1BP3
EMC6
RAP1A
ADGRA1
SMARCA2
PHLDB2
RABGAP1L
IFTAP
C6orf132
C2CD4D
RPL15
ARHGAP24
HOXA9
KMT5C
RGS12
ZSCAN31
NUFIP2
ZBTB26
MAP1B
SERPINB6
HES6
MS4A12
PTX3
OLIG3
RTRAF
RAB25
PEX11G
ZNF474
KIAA1522
NARF
MAST4
TRIB1
NUP214
EIF1AX
SPRING1
RNFT2
CALR3
C19orf44
TBC1D10B
RBBP9
MYLPF
SLC2A4
MIDN
ETFDH
C4orf46
ACSBG2
TMEM132A
LDB1
XAB2
TSTD2
NCBP1
BAZ2A
YIPF3
POLR1C
ZSCAN10
MAD2L1BP
GTPBP2
MRPS30
FAM76B
CEP57
KCNMB2
UBTD2
IGF1
TPCN1
IQCD
RFX1
CCPG1
C15orf65
ARHGEF19
GAS2L3
ZNF250
PBX1
GID4
ATPAF2
PLEKHA5
CITED2
TMX2
MED19
POU2F1
NEMF
CRISPLD1
PQBP1
TIMM17B
MEIG1
RAPGEF5
MTUS1
ZNF101
DPP4
NELFCD
GTF2H4
TCF20
KANSL1L
ZNF292
TAL1
KCTD6
ZNF3
SLAIN1
RPUSD4
FAM118B
GOLPH3L
SEC22B
ITGB8
MAP2
CPSF4L
CLIP1
EXOSC2
IGSF9
LIFR
GRIN3A
ILF2
RBP1
KXD1
MMRN1
APH1A
ZBED5
PRKRIP1
CD300LB
PPP1R15A
MEGF9
ERV3-1-ZNF117
ERV3-1
TSPAN13
GPBP1
BTG1
RNF44
RND1
QPRT
FOXN3
CHMP4B
CPA5
ZNF593
C1orf232
PRTFDC1
LYSMD3
GGH
RBPJ
NR2F1
NEK2
CCDC172
BPNT2
NLGN1
SAPCD2
SLC4A2
CDK5
XPC
LSM3
ENOX2
RGSL1
ANKRD6
PLEKHG2
ZBTB20
ST7
SLC3A2
ZSCAN12
OR13C2
FEM1A
LDAH
CLPB
ZNF85
HNRNPL
STAU2
HIP1
GRAMD2B
ADD2
LMAN2L
ZHX3
VCPKMT
PTPRZ1
SPTBN1
ZNF576
TTC39B
IRGQ
FNBP1L
UBE2T
APPL2
ZNF8
BSDC1
CCDC171
SUFU
MCTS1
SEPTIN9
ZIK1
CDK16
FAM102A
DDX20
DCLRE1C
PTPRD
ZNF273
FMNL3
ZMAT2
CHD9
MTDH
WTAP
SOD2
ZNF277
DOCK4
BMPR2
RIPOR3
CABYR
NODAL
OXNAD1
DSE
DPH3
ABLIM1
METTL9
ZSCAN18
SMC3
EIF3F
CIAO2A
ZNF548
TBC1D9
TSPYL4
KMT5A
EID3
NCLN
PTPN12
INSYN2B
ZBTB38
DYRK1B
SCNN1A
MMP11
CA8
SLC35G4
MAPK14
GNA12
ICE1
DOCK9
LGR6
DYNLL1
RAI14
DACH2
KBTBD2
AP3M2
EVI5L
IGDCC3
ZNF140
REEP6
PCSK4
TMEM220
CENPA
PRDM14
HLCS
RIOX1
SRPRA
C16orf78
GBF1
ACTR2
VMP1
PTRH2
CLIC1
MYO1B
LMO4
ANK3
NUBP1
FEZ2
DDA1
ZNF335
UFSP2
EFCAB8
MTHFD1
MEA1
CX3CL1
ZNF737
INTS12
GSTCD
ERICH6B
ZNF668
WLS
CHD7
SLC7A11
DAOA
ZNF286A
NSMCE4A