ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11919277 | hESC derived neuromesodermal cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◣ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

CER1
METTL11B
VENTX
MTF2
REST
VOPP1
SP5
GIMAP5
LIN28B
OTX2
WBP1L
SACS
PSMD9
HPD
DAOA
MACROH2A1
SLC7A5
WNT5B
KCNIP4
PRICKLE1
CCDC169-SOHLH2
CCDC169
CCDC92
PRSS56
NRG1
LINGO1
ALDH3A2
AK4
MDK
ZNF649
GSN
PMEPA1
PLPP2
IL17RD
SNX16
HESX1
ZNF343
PIPOX
DCLK1
FAM120B
FBP1
SRRM4
F11
FBXO40
IER5L
NFE2
LOC107986453
TACC2
GDF3
ANK2
DHX32
CDX1
DKK4
DNMBP
SNRPN
TDGF1
DDX3X
NRARP
TBC1D16
TLE3
FAM153B
DACH2
SOX6
CCN2
CARHSP1
NADK
HAS3
ST18
PPP1R16B
VANGL2
OBI1
C16orf78
ODF2
KIFC3
STRA6
FAM227A
CBY1
GEMIN7
INSM1
MPZL2
SUCLA2
RIF1
ZNF202
MRPS15
SLC2A14
DAGLB
DDX59
IFRD1
TIMP4
TCHP
LRRTM3
CAPRIN1
GADD45G
NANOG
OCLN
HLCS
AHCYL2
HOXB1
FSTL5
YWHAQ
RIMKLB
PPP1R18
ADA2
RNF43
AUH
PCDHB8
KIFBP
HIP1
CPVL
PKDCC
C22orf39
DKK1
STMN1
CFLAR
MED12
HDAC9
PES1
TCN2
FZD2
SET
SNAPC3
ST6GAL1
ABCB8
PCDHGC4
TMCC1
COMMD7
WDFY2
SAMD3
ACVR1
ZBTB45
TNFRSF19
PLAGL1
IGDCC3
GPSM3
DST
DISP3
ZCCHC14
ILDR1
RFFL
KDM3A
OCIAD2
SMAD3
KMT2B
PITPNM2
PHLDB2
VASP
SASH1
RBP1
DPPA4
KIAA1522
ALPL
WFDC8
BRINP2
WDR74
ZFAND3
NDUFS5
TJP2
GREB1
AKIRIN1
NOD1
ZSCAN10
SUPT4H1
GPC6
MEIG1
FOXP1
ETV4
CELF3
TRPM3
LIN28A
LGR6
GRK7
ETV1
SPAG9
WDR36
C6orf132
DUSP12
CDH6
NODAL
SPIC
ITGB1
VRTN
ADAM28
RTBDN
KLF7
PDCL
SPATA12
FGFR2
CFAP20
KMT2A
ZSWIM4
RCOR1
ZNF335
PDE4D
CHN2
LY6G6D
AASDH
ZNF101
BMPR2
GSTO1
SELENOP
TRIP10
NEBL
GSC
NSMCE4A
ACSL1
TRIM38
CLDN6
EVX1
RABGAP1L
HK2
ZNF524
FIZ1
GCNT2
EFNA4
CDH10
HMGN1
NCS1
TMEM200B
ARID5A
PCDHB5
ZNF141
CAMTA1
ZNF627
ZBTB8OS
RBBP4
E2F7
PTPDC1
ESRP1
FILIP1L
USP53
TEAD3
LZTFL1
DET1
IL23A
ALDH7A1
FBLIM1
KCNN2
PCDHB13
SLC16A1
LRRTM4
CCNG2
MMP11
PPM1H
SYNCRIP
TMEFF1
INKA2
LAMB1
C20orf96
KRTAP3-1
GAS2L1
ICAM3
MEF2C
CYTH2
RAB34
MGRN1
MORN3
ARSI
MAP3K12
NAP1L4
CEP41
DLG2
EID3
RAB5A
EFHB
PARP8
MAP2K5
PDPN
ZNF426
USP44
ZNF48
UGT1A4
AKR1D1
PCBP4
NOTCH1
SOX5
C1R
CAMKV
SGMS2
CD200
POC1A
GRB7
BRWD1
PBLD
HNRNPH3
TMEM123
SLFN12
ISOC2
TTI2
FNDC11
EPB41L3
TBX22
CELSR1
RBBP6
STOX2
CDK5R1
KLF17
GLI2
TLL2
ZNF668
GALNT8
QPRT
RBM4B
PSMA1
ARID2
HSPH1
ID1
VCPKMT
FGFRL1
CMSS1
MTA3
FBN3
ARHGEF37
PRIM1
PTMA
UFD1
CDC45
LYVE1
TMEM132A
ADARB1
IP6K2
ZSCAN2
TNRC18
LPIN1
ZNF304
WDTC1
TBC1D9
HES2
HNRNPH1
PYDC5
IFI16
OLFM2
SLC29A3
KCNJ15
TGIF1
ST3GAL4
SMAD2
IFIT3
ZNF630
BFSP1
SPRED3
KIF3C
LRP6
FLAD1
HELLS
DLX5
ZSCAN9
WFDC2
HEXIM1
WTAP
SOD2
NUP160
TP53INP2
PCDHA10
RBL1
MAPKAPK3
CISH
KRTAP13-3
LYPD1
ATF4
CXADR
MYO15B
THEM4
SEC22C
SS18L2
AJUBA
RAD54B
FSBP
FRAT1
HBP1
MAD2L2
DRAXIN
PIN4
DPP3
MYO1B
SHF
CBX2
EVI5
NOTCH3
MSANTD4
NDUFB5
MRPL47
HMGB1
FUZ
GRK6
DDX17
MOBP
FGD4
DNMT3B
PHF5A
ACO2
MTRNR2L2
FBXL19
HGS
ARL16
IQCH
AAGAB
ZFC3H1
JPT1
THAP2
CCT2
ITPRIP
ZNF532
CDC14B
MTRNR2L8
TUBB
DGLUCY
ZNF775
MCCC1
SFRP2
RFX4
EEF1A1
TES
ARIH1
KDM2A
GET3
WDR49
UGT1A6
SPRY4
TNC
SINHCAF
NDST1
PLEKHG1
H3-3B
TOMM40
CHD6
SIX2
SLC33A1
PDIA4
SRSF7
PXMP4
ZNF195
PRRC2B
SLC25A36
TMUB2
TMEM41B
FOXO6
NRCAM
MARCKS
SLC16A13
CFL1
PGK1
TESK2
ZNF428
DACT3
KLF5
VASH2
OSBPL1A
EPB41L1
CNGA1
PIK3R3
ETV6
DICER1
CELSR3
TRMT2A
RANBP1
PALM2AKAP2
RGS3
SLCO5A1
OGA
POLB
RASAL2
MBOAT2
UBQLN4
CTNND2
ANAPC15
CD2BP2
KNTC1
ERMN
LAMTOR2
DHX8
HES5
CSRNP2
ARHGAP42
ESRRA
EMC9
TIAL1
SH3GL3
LLGL1
SMARCAD1
GADD45A
SLC25A11
RNF167
WASF1
CDC40
VEZT
FGD6
PLCH1
YLPM1
CCL2
PIF1
CAAP1
TUT1
CNR2
CEP170
ISL2
SLC10A2
SDCCAG8
OAZ2
RNF213
CTTNBP2NL
RAB30
G3BP1
KLHL24
JUP
PPME1
C2CD3
ZFYVE1
EMSY
F11R
SFPQ
EGR3
ERGIC2
DHRS3
CLCF1
H4C14
CCDC167
YEATS2
TLX3
PWWP2A
TRDMT1
ETFB
STK32C
LRRC27
KRT8
PCYT1B
NEDD9
GOLGB1
LIMCH1
CEP63
ANAPC13
ZBTB40
ZDHHC5
SAXO1
RRAGA
RBM39
RNF19A
AFF1
ZNF318
FAT1
ADRM1
ACCS
RGPD2
RGPD1
MANSC1
HEXIM2
FAM181A
CNP
TRIM22
TIA1
JAG1
BORCS6
SMIM14
MOSPD3
ARF4
KIAA0895L
HNRNPDL
EP300
TSNAXIP1
RANBP10
RPL27
ATAT1
IPO11
ENOPH1
HLTF
CNN3
GSPT2
SYAP1
CCDC88A
TMEM114
CNKSR3
ZBTB6
SYNPO2
ZNF37A
ZNF358
CCDC200
LPCAT4
PSMB7
ZNF469
ADAR
ZCCHC12
NKIRAS1
SENP8
MYO9A
H4C15
HSPA13
DTNA
ADNP
ACTR1A
GFM2
POLDIP3
ESR1
C1orf127
DERA
BBS7
TSGA10IP
CLEC9A
EXOC5
AP5M1
UQCRQ
GDF9
AKAP9
GDF5
CEP250
OARD1
NFYA
SPHK2
SPAG4
TRAK2
STRADB
LPP
SYTL2
ZNF106
ZNF763
AMOTL2
SLC2A11
WBP11
RRBP1
PELI1
C12orf60
HIP1R
CDK12
MMACHC
SLCO4C1
TNFRSF21
HACL1
BTD
TCF4
MMP10
H2AZ2
PSME3IP1
PDP1
SPHK1
TMPRSS7
KLHL4
RSF1
AAMDC
RSPH14
RASSF8
ZNF254
TFDP2
CCDC130
SCOC
VGF
CALD1
HEBP2
RSPRY1
METTL7A
SYBU
PIMREG
ZCCHC8
RIMBP2
POLR3E
ABAT
SMARCB1
BLOC1S4
PAIP2
GFRA1
PER2
RBMX
GRHL2
DPPA2
MTRNR2L9
PTGS1
ELOVL5
EGFR
ZNF506
STAG3
GPC2
PKNOX2
PTCD2
MRPS27
KLHL5
PRR5L
DNM1L
TTF2
SIRT4
PROM1
NASP
ATAD2
BCL9
LCOR
ZNF608
AFAP1
INTS9
HMBOX1
C11orf58
MAP3K9
PAG1
SNX27
KIF21A
CHD8
TINAGL1
DNM2
PDE4B
HNRNPUL1
CCDC146
G3BP2
LOC389199
MRGPRX3
SDHD
ZBTB18
TBC1D17
DDX5
AKT1S1
COPS7A
ERBB2
TBC1D31
GXYLT2
TSPAN19
LRRIQ1
BTBD3
CHMP7
IREB2
PACRGL
LTBP1
ZNF180
PRM3
SHROOM3
RAB4B
PNRC1
TUT7
BCAT1
CYP4F11
PAXBP1
CTH
FAM220A
TAX1BP3
EMC6
RAP1A
OGT
ADGRA1
SMARCA2
IFTAP
C2CD4D
RPL15
ARHGAP24
HOXA9
MCM7
KMT5C
AP4M1
RGS12
ZSCAN31
NUFIP2
ZBTB26
PGM2L1
MAP1B
SERPINB6
HES6
MS4A12
LNX1
PTX3
OLIG3
RTRAF
HNRNPC
RAB25
PEX11G
ZNF474
IPO4
NARF
MAST4
UBR2
TRIB1
NUP214
EIF1AX
SPRING1
RNFT2
CALR3
C19orf44
TBC1D10B
RBBP9
MYLPF
SLC2A4
MIDN
ETFDH
C4orf46
ACSBG2
LDB1
XAB2
TSTD2
NCBP1
COX8A
BAZ2A
YIPF3
POLR1C
GBA
MAD2L1BP
GTPBP2
MRPS30
FAM76B
CEP57
KCNMB2
UBTD2
IGF1
TPCN1
IQCD
RFX1
CCPG1
C15orf65
ARHGEF19
GAS2L3
ZNF250
PBX1
GID4
ATPAF2
PLEKHA5
FZD1
CITED2
TMX2
MED19
POU2F1
NEMF
SMC4
IFT80
CRISPLD1
PQBP1
TIMM17B
RAPGEF5
MTUS1
DPP4
NELFCD
GTF2H4
TCF20
KANSL1L
ZNF292
TAL1
KCTD6
ZNF3
SLAIN1
RPUSD4
FAM118B
GOLPH3L
CCL26
SEC22B
ITGB8
MAP2
CPSF4L
CLIP1
EXOSC2
IGSF9
LIFR
GRIN3A
H4C9
ILF2
KXD1
FGF19
MMRN1
YWHAG
APH1A
ZBED5
PRKRIP1
CD300LB
PPP1R15A
MEGF9
ERV3-1-ZNF117
ERV3-1
TSPAN13
GPBP1
BTG1
RNF44
RND1
FOXN3
CHMP4B
CPA5
ZNF593
C1orf232
PRTFDC1
LYSMD3
GGH
RBPJ
NR2F1
NEK2
CCDC172
BPNT2
NLGN1
SAPCD2
ZNF268
SLC4A2
CDK5
XPC
LSM3
ENOX2
RGSL1
ANKRD6
PLEKHG2
ZBTB20
ST7
SLC3A2
ZSCAN12
OR13C2
FEM1A
LDAH
CLPB
RAB5C
ZNF85
CDK5RAP2
HNRNPL
STAU2
GRAMD2B
ADD2
LMAN2L
ZHX3
PTPRZ1
SPTBN1
ZNF576
TTC39B
IRGQ
FNBP1L
UBE2T
APPL2
ZNF8
BSDC1
CCDC171
SUFU
MCTS1
SEPTIN9
ZIK1
CDK16
FAM102A
DDX20
DCLRE1C
PTPRD
NTMT1
ZNF273
FMNL3
ZMAT2
CHD9
MTDH
WDR33
ZNF277
DOCK4
RIPOR3
CABYR
ANKRD65
OXNAD1
DSE
DPH3
ABLIM1
METTL9
ZSCAN18
SMC3
EIF3F
CIAO2A
ZNF548
TSPYL4
KMT5A
NCLN
PTPN12
INSYN2B
ZBTB38
NDUFS7
LRRC23
ING4
DYRK1B
SCNN1A
CA8
SLC35G4
MAPK14
GNA12
ICE1
DOCK9
DYNLL1
RAI14
KBTBD2
AP3M2
EVI5L
ZNF140
REEP6
PCSK4
TMEM220
CENPA
PRDM14
RIOX1
SRPRA
GBF1
ACTR2
VMP1
PTRH2
CLIC1
NDE1
LMO4
ANK3
NUBP1
FEZ2
CPNE2
DDA1
UFSP2
EFCAB8
MTHFD1
MEA1
CX3CL1
ZNF737
TOMM40L
INTS12
GSTCD
ERICH6B
WLS
CHD7
SLC7A11
GCDH
ZNF286A