ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1047413 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◣ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SACS
PIPOX
HMGB1
DNMBP
HDAC9
OBI1
OTX2
DNMT3B
METTL11B
ADAM28
REST
MTF2
FAM227A
CBY1
FBXO40
SLC7A5
PLPP2
GIMAP5
SFRP2
PHF5A
ACO2
SOX6
DAGLB
SRRM4
TNC
IFRD1
DHX32
FBP1
NANOG
LIN28B
PPP1R16B
LRRTM3
TUBB
PSMD9
HPD
ACVR1
FUZ
WDR74
CER1
GRK6
DDX17
PTMA
HESX1
TOMM40
FGFR2
ERBB2
PXMP4
RFX4
SNRPN
NADK
SLC2A14
C20orf96
SGMS2
ZNF304
NDUFB5
MRPL47
LRRTM4
ZNF608
TDGF1
CARHSP1
USP44
ADA2
HGS
ARL16
ALDH7A1
CD2BP2
IZUMO1
CDC14B
FAT1
ZNF428
NRARP
ZFC3H1
THAP2
RTBDN
PRICKLE1
NDUFS5
CELF3
UFD1
CDC45
TESK2
WFDC8
CCT2
CD200
TLX3
IER5L
KIFBP
WDR49
PDPN
FGD4
GET3
GPSM3
PYDC5
IFI16
GADD45G
GDF3
DST
NRG1
HOXB1
PIF1
FBXL19
BBS7
ANK2
CTNND2
MOBP
RAB30
HIP1R
FAM153B
TRIM22
YLPM1
BRINP2
ETV1
LLGL1
MMP10
SYAP1
ZNF195
CPVL
TMEM41B
RAD54B
FSBP
CEP170
SDCCAG8
ERMN
H3-3B
ETV4
RNF213
ETFB
QPRT
ZNF763
PES1
TCN2
KCNN2
AKIRIN1
ACCS
KMT2B
CELSR3
NFE2
CYTH2
ARHGAP42
MAP3K12
TBC1D16
BCL9
WDR33
IL23A
PMEPA1
SASH1
CCDC124
SLC16A13
SLC33A1
SMIM14
ESRP1
ESRRA
KCNIP4
KNTC1
GSN
ZSCAN2
RASAL2
TJP2
BORCS6
C1orf167
ARF4
PDCL
MOSPD3
RBM39
ZNF506
ARHGEF19
PLA2G3
ZNF474
PLCH1
EGR3
WDR36
ARMC3
AASDH
DPPA4
PAIP2
SMAD3
CCDC92
KDM2A
CNKSR3
ACTR1A
SUFU
SRSF7
TMCC1
ZNF101
ACSL1
ITPRIP
CDH10
RIF1
FZD2
CHD9
DGLUCY
YPEL3
BFSP1
NOTCH1
GOLGB1
RPL27
ST6GAL1
NDST1
RNF19A
SLC25A11
RNF167
GCNT2
ZNF202
PTGS1
GABARAP
PSME3IP1
RSPRY1
SPRY4
ARID2
CDON
TSGA10IP
ADAR
ARIH1
ZNF532
ETV6
COX8A
TRDMT1
AUH
PCDHB8
ZBTB45
UQCRQ
GDF9
LOC107986453
MCM10
PBXIP1
KDM3A
WASF1
CDC40
CAPRIN1
SCOC
SYT12
INTS9
HMBOX1
ST18
PDIA4
GSPT2
TTF2
SAXO1
RRAGA
ZNF35
RGS3
IFTAP
ZNF3
TES
RCAN3
MSANTD4
ESR1
ILF2
TIA1
ALPL
N4BP2L2
SALL4
DUSP12
TIAL1
MAP3K9
TRPM3
TTC39B
EIF4E3
SLC25A36
PWWP2A
MARCKS
CCDC167
SPHK2
ZNF180
PIN4
SH3GL3
MMACHC
SNX16
DHX8
TRIM38
OR51H1
RTKN
RSPH14
WBP1L
FOXP1
SYNPO2
AMOTL2
SFPQ
ATAT1
SHF
EMC9
ANAPC15
ZSCAN10
PCYT1B
TIMP4
VOPP1
FOXO6
CCN2
PKNOX2
ETFDH
C4orf46
VMP1
PTRH2
PTX3
BAZ2A
ZNF682
MYMX
SMARCAD1
GADD45A
DHRS3
WBP11
C12orf60
ZNF254
KDELR2
HELLS
NAT1
POLB
CCL2
IP6K2
CNN3
WNK3
MYO18A
TMEM33
PRKRIP1
SAPCD1
C1R
SLC25A18
DISP3
DDA1
PANK2
OGA
PTCD2
MRPS27
NEMF
ANP32B
VASH2
CALD1
RND1
USO1
ZNF737
WLS
ZCCHC14
PQBP1
TIMM17B
RERE
MCCC1
ZNF85
ZNF486
SELENOP
GGPS1
ARID4B
SNAPC3
TSNAXIP1
RANBP10
HNRNPUL1
HNRNPC
ERICH6B
PACSIN3
DGKB
HMGN1
EIF3F
CFAP20
LOC390877
GTF2F1
SHROOM3
CBR4
PUM1
FAM13A
RGSL1
CDK16
TMEM237
BTBD3
ZNF561
OSR2
PEX5L
CAMTA1
HSPA13
WTAP
SOD2
VCP
SLX4IP
DACT3
ERGIC2
POU2F1
SPEF1
KIAA0895L
PAG1
EFCAB8
RAB4B
FAM185A
AFF1
BAMBI
ZNF677
BLOC1S4
INSYN2B
CDHR3
TMUB2
ENOX2
CCNB1IP1
KATNAL2
ZNF627
CCDC200
ABLIM1
LCK
MACROH2A1
LIMCH1
PTPRZ1
PGAP2
TP53AIP1
ZNF43
DISP1
RGS12
FAM76B
CEP57
CCDC77
HNRNPDL
ENOPH1
LRRC23
REC8
OARD1
NFYA
OSGEP
APEX1
ACYP2
PRRC2A
PSME4
SIX2
ADNP
PER2
ZMAT2
PGAM1
PPME1
C2CD3
GTF2H4
ZBTB26
ZNF630
ZCCHC12
MRPS30
GRIN3A
KXD1
ZSCAN9
G3BP1
HEXIM2
GDF5
CEP250
TSPAN19
LRRIQ1
CEP164
CTTNBP2NL
SPAG9
CCDC130
SELENOF
HS2ST1
PELI1
KLHL4
ZNF589
FBXL8
VRTN
ISL2
ZBED5
ZNF268
XPC
LSM3
NONO
SPEG
PBLD
HNRNPH3
SUGP2
ARMC6
RNASE9
TFDP2
ATAD2
ZNF548
SHC1
CKS1B
ZNF775
SLCO5A1
H4C9
HIP1
PIAS2
UBA1
MED12
EMSY
SPAG4
DACH2
LMBRD1
MUSK
TCF20
ANKHD1-EIF4EBP3
ANKHD1
ITLN2
FLAD1
FRRS1L
PDE4B
PEX11G
GOLPH3L
EXOSC2
ZNF253
CDC7
ESYT1
DPP4
MS4A6E
INKA2
KLHL5
APH1A
CLCN5
ACSBG1
ARHGAP27
ZBTB40
BSDC1
SMARCA2
SYTL2
VPS37A
CNOT7
CHD6
HSPH1
ZSCAN31
CNP
ZCCHC8
MTUS1
LYRM7
TPGS1
INAVA
TCTEX1D4
BTBD19
NFIA
AHCYL2
RSF1
AAMDC
PACRGL
MIDN
ZBED3
IPO11
ZNF8
CEP41
FAM120B
ZNF469
PPP1R15A
DNAH2
SPART
ZBTB6
ZNF91
PPP1R12C
ELOVL5
SLC25A25
PSMB7
RBM22
MAP2K5
HNRNPL
MCTS1
ZIK1
BMPR2
THBS2
RABAC1
COX7B
NUP62
IL4I1
ATF5
GJC1
CDK5R1
PAXBP1
TSPAN14
ALPK3
PIK3R3
STRADA
GPR55
ZNF358
GALNT8
PCDHB13
CCDC146
EHD4
ZNF92
SORBS2
TPCN1
IQCD
CIAO2A
DNAJC12
GPC6
ORAI3
SLFN12
C11orf58
MAPK14
IGBP1
BCL11B
ZNF675
FTL
C1RL
VEZT
FGD6
JAG1
ZNF273
MAT2B
STK32C
LRRC27
USP53
SLC2A4
EPHA2
DUSP7
MRPL42
PCDHA11
ZNF611
OSBPL1A
DDX59
NAIF1
RPA2
ILF3
ZNF285
E2F7
NARF
CLIC1
ZNF668
ZNF720
TBC1D31
RAB25
FAM72D
FAM72C
TREX1
WDFY2
DPP3
CSRNP2
ZSWIM4
PIP4P1
MGST1
SPATA12
FKBP3
HES5
ZBTB8OS
RBBP4
CDK12
CHD8
ADGRA1
REEP6
PCSK4
SPPL2B
LSM7
NSUN3
DHFR2
FAM3A
VIPAS39
AHSA1
OIP5
NUSAP1
NPDC1
HS6ST2
LOC102723996
ICOSLG
SELENBP1
AKR1A1
OLFML3
DPPA2
YIPF3
POLR1C
CLPB
PTGFRN
TCAIM
RBM23
ZNF681
PRRX1
PNN
PRMT1
CLEC3A
GFM2
GRHL2
CRISPLD1
CCDC171
PHOX2B
NUP160
ADRM1
SLCO4C1
SPTBN1
PALLD
TENM2
DELE1
PRRC2B
CCNG2
PTPN12
CCDC152
IQCH
AAGAB
TCF4
KLF17
G3BP2
GBA
PCBP2
H3C1
SDHD
ZNF493
L3MBTL4
TUT1
KLHL24
YWHAG
PLTP
TXLNG
PRKRA
PJVK
CLDN4
SP2
EEF1A1
TRMT2A
RANBP1
NCLN
CMSS1
ACTL6B
COPS3
IFRD2
PSKH1
PDE1A
INPP5K
C7orf65
DDX3X
NDUFB4
RPS6KA2
RABL3
GTF2E1
NFKBIL1
ATP6V1G2
PLEKHG1
SP5
SERPINH1
ZNF66
ADAMTSL1
TENT5B
RBBP9
NRL
DCAF11
CSRNP3
AP1S1
WNT5B
RABGAP1L
NSMCE4A
TOM1L2
DRC3
DPAGT1
SERPINB3
NASP
ADD2
CSNK1A1
ZNF343
UBQLN4
LAMTOR2
TBC1D10B
MYLPF
EPHB6
MED17
ANKRD28
PAX6
NR2E1
CLCF1
AFAP1
LOC389199
PNRC1
FAM220A
OLIG3
NGDN
FAM221A
TNNT1
HACL1
BTD
TBC1D17
AKT1S1
BAG6
APOM
C1orf100
ATF6B
EPB41L1
RBBP6
PRTFDC1
APC2
PSMB6
AMACR
ZMAT1
NUDCD2
HMMR
UBXN4
TMX2
MED19
FEM1A
KNL1
ARSD
H2AX
GALM
MTMR4
WDR86
CAPNS1
DNM2
ATOH1
NF2
HDGFL2
MPND
TMX4
PHF12
SP1
TRIOBP
TMBIM6
ZNF724
SLC39A9
ERH
LRRC34
TMPRSS3
IL1A
CLIC6
PPP1R18
DYRK1B
FXR1
ZFP64
GDPD2
TLCD3B
TSNAX
ARID5A
KHSRP
WDTC1
MEX3B
SET
POLR3E
FRMD4A
TPP2
STOX2
NR2F1
TTI2
RNF26
ELP5
CTDNEP1
DCLK1
COPS7A
CABYR
ATF7IP
TMEM91
B9D2
TM9SF4
EP300
GSK3A
JADE1
NDUFA2
IK
ZNF714
EMC4
PACS2
KCNN3
ZNF738
KAT7
TP53BP1
DPYSL2
AMOT
CHN2
RRBP1
SLX1B
SLX1A
BOLA2B
BOLA2
CCDC30
INTS4
TAS2R7
GBF1
TRIM54
GATB
GLIPR1L2
SUMO2
PAX9
MDK
RFFL
XAB2
RPS6KB2
DMD
NUDT2
KIF24
HAGH
FAHD1
UBALD2
HYI
CDX4
TMCC2
TMEM190
SEC63
HBP1
SENP8
MYO9A
ERV3-1-ZNF117
ERV3-1
ARL14EP
ZNF100
ZBTB11
CENPV
GCSAML
MEF2C
LCOR
FGF19
UQCRC1
TNRC6B
SALL2
UBOX5
FASTKD5
ZNF433
PAIP1
VPS52
RPS18
TNFRSF21
METTL9
TMEM143
SYNGR4
FXR2
CACYBP
SHBG
NDUFA5
SCGB1C2
SCGB1C1
H4C14
UBR2
CD300LB
FEZ2
RND3
LTBP4
ZNF106
GRAMD2B
LMO4
EIF3E
MAPK10
POC1A
AKIRIN2
KIAA0319
AFF3
RFPL3
STAG3
GPC2
ABHD2
PAFAH2
FBXO16
POLR3A
TNNT2
C1orf94
SIRT4
ACAA1
FH
UQCRC2
SRA1
C1GALT1
TMF1
CLK4
MTHFR
CALCRL
FABP7
H4C3
DUS3L
RDH11
HMG20B
SLC13A4
VENTX
WDPCP
EVI5
NKAIN4
MDH1
OXA1L
ABCF2-H2BE1
ABCF2
HSP90B1
DKKL1
PCDHA10
S100A4
SNX15
TRAPPC6A
BLOC1S3
ZNF586
RBAK-RBAKDN
RBAK
H2BC5
NPIPA5
NEDD9
ING4
IGFBP2
FNDC11
ANKRD36B
WDR89
MAGED1
KRTAP13-3
ALDH1A3
PHLDB2
SLC7A11
GCDH
EXOSC5
BCKDHA
SMUG1
KBTBD6
WRAP53
TP53
AP2S1
ZNF587B
PDE9A
KCNA1
NKIRAS1
RPL15
ZNF292
CCDC174
ACTR3
WBP1
RAD21
PAK2
FLYWCH2
GAL3ST4
SLC39A14
GABRG2
ZNF277
DOCK4
ANK3
PRCC
ZNF430
RBMS2
H2AC16
PI4K2A
ZNF576
IRGQ
AGPAT1
C12orf57