ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852814 | LK-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◣ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
PTMA
FAM227A
CBY1
CELF3
MTF2
NOTCH1
NDUFB5
MRPL47
ARID2
FUZ
ZSCAN2
GGH
GRK6
IQCH
AAGAB
TJP2
PIPOX
HMGB1
SLC12A7
IFRD1
SH3GL3
SNAPC3
SLCO5A1
CLEC9A
PLEKHG1
TLX3
DDX17
C2CD4D
TARS3
PLPP2
ETV1
TMCC1
HGS
ARL16
TES
H3C6
ARIH1
ADAM28
WFDC10B
KMT2B
HOXA9
H3-3B
PHF5A
ACO2
UGT1A5
KRTAP3-1
FBXL19
ZNF775
PPFIBP1
GLI2
CCPG1
C15orf65
NUP160
SINHCAF
H4C14
RTBDN
NARF
ESRRA
NADK
MARCKS
C3orf20
PRDX1
YEATS2
H4C15
HDAC9
WFDC8
MSANTD4
KDM2A
ARHGAP24
MAD2L1BP
GTPBP2
ZFC3H1
THAP2
CCT2
AUH
SYNE2
SLC33A1
KRT23
ESRP1
NRCAM
SEPTIN9
PLK2
GOLPH3L
KDM3A
C6orf132
ZNF428
CFL1
MAP3K9
RFX5
NDUFS5
PPME1
C2CD3
BORCS6
SPRY4
SLC20A2
ZNF195
EGFLAM
POLB
HMGN1
ZNF687
SIX2
HOXB9
CDH18
CAV2
ZBTB6
SH2B2
LRP1B
SRGAP2C
SRGAP2B
LTBP1
NDE1
PI4KB
IL31RA
PLCH1
TRIB1
UBTD2
ZBTB45
LTK
KCNN2
PDP1
CLCF1
KNTC1
DUSP12
CYTH2
ZFP69B
PDIK1L
EIF4EBP1
PGK1
OAZ2
GOLGB1
PSMB7
SYBU
SCNM1
LYSMD1
SLC25A36
DPP3
TIAL1
ST6GAL1
ACTR2
SRGAP1
ETV4
FGF1
TRAK2
STRADB
RSF1
AAMDC
CDK5R1
RPS11
PIF1
GADD45G
F11R
SNX27
DCSTAMP
SNRPN
ZNF106
TMEM132A
TMEM211
DST
CAPRIN1
LIMCH1
PIK3R3
FNBP1L
CUEDC1
SPATA12
IGF1
SNTB2
CPVL
PDIA4
KANSL1L
SC5D
STX6
ZNF304
HACL1
BTD
ARNT
ZBTB40
TLN2
ANAPC15
CEP63
ANAPC13
TNRC18
JUP
PCDHB8
MANSC1
ZNF736
TRMT2A
RANBP1
MRO
ETV6
PTPRO
SEMA6C
ITPRIP
DLX5
CNIH4
FGF3
KLF7
TMPRSS4
TCF12
SLC25A11
RNF167
SDHD
CITED2
RAET1L
GSN
VANGL2
ICOS
PMEPA1
EMSY
ANKRD65
CHMP4C
POC1A
RPA3
TIA1
VGF
PIMREG
ST7
MCCC1
CACHD1
TWIST2
SH3D19
BBS7
EIF4A2
FGF18
VASH2
UBOX5
FASTKD5
FAM83A
KCNH8
ZDHHC5
ZNF292
RAI14
RPL27
H2AC19
H2AC18
HSPB3
HCN4
ARID5A
ADRM1
MCM7
AP4M1
KLHL24
RRBP1
LDB1
SST
TMEM41B
PIN4
SPHK1
AFAP1
LOC389199
CHN2
ZNF184
ST8SIA1
WASF1
CDC40
LNX1
MFSD6
NDUFS8
MINDY1
PLEKHJ1
CHD6
RASAL2
FILIP1L
LMO4
ANP32E
ZNF346
CTTNBP2NL
SMC4
IFT80
EMP1
ZNF680
MYPN
SYNCRIP
RABGAP1L
CEP164
OGA
AKAP9
IP6K2
TCF4
ZNF608
PCBP1
MRPL42
LY6G6D
TBC1D31
SPRING1
RNFT2
CPSF4L
CHML
ZSCAN9
CSRNP2
THEMIS
G3BP1
GFM2
INSM1
EYA1
LPP
MAPK14
PTGES2
HEBP2
INTS9
HMBOX1
OR13C2
SLC7A11
PHF14
FOXO6
CNP
VPS50
HEPACAM2
KNL1
DMRTA2
ZBP1
GPER1
WDR74
RTRAF
ZNF268
SLC3A2
MTHFD1
PIP4K2C
IRF4
NEBL
SFPQ
PER2
APH1A
SLC45A4
TMUB2
SACS
CNKSR3
TAX1BP3
EMC6
RIC8B
SOX6
ERMN
C11orf58
ERV3-1-ZNF117
ERV3-1
ICE1
ST3GAL4
WBP1L
KIAA0895L
CCDC88A
CTH
HSD3B1
DDX41
RHBDL2
RAB30
SYTL2
ZFAND3
SAPCD2
METTL9
RHOBTB2
PRSS56
ALDH3A1
GFOD1
GPSM3
HBP1
ZNF277
DOCK4
RNF122
UFD1
CDC45
EIF3F
H2AZ2
ZBTB10
MAB21L4
SENP8
MYO9A
GOLIM4
TUBG1
RETREG3
BNIP2
UBQLN4
LAMTOR2
CEP170
SDCCAG8
PELI1
RPS6KA2
TADA1
GAL3ST4
CADPS
ZSCAN31
PRCC
EP300
SH3PXD2A
CLDN22
MCC
NXPE2
TOMM40
SHF
CDK5RAP2
RPL23A
CD2BP2
WDFY2
EMC9
VEZT
FGD6
MPND
OR4C6
MYO1B
PHF3
MOSPD3
HSPA13
GORASP2
OARD1
NFYA
TTF2
TTC23L
EXPH5
TMEM60
PHTF2
NKIRAS1
ZBED5
MEGF9
TSPAN13
C2orf73
INTS4
UBALD2
FAM72D
FAM72C
PAFAH2
ZBTB8OS
RBBP4
FBRS
RDH5
ASCL4
WDR36
ZNF8
COX8A
CDC14B
THEM4
FOCAD
CYTH1
EEF1A1
DEDD
ATL1
GTF2H4
EEF1AKNMT
ZNF708
MEA1
MOBP
SNRPC
PDE4DIP
CIART
NFYC
BAZ2A
ASPM
PNRC1
PCNP
RAPGEFL1
MAT1A
MIA3
TIMM10
ZNF189
MRPL50
CKAP5
OR2AE1
REST
OTX2
METTL11B
DNMBP
NRG1
OBI1
PRICKLE1
SRRM4
FLAD1
MED12
HESX1
VENTX
TDGF1
PSMD9
HPD
ZNF343
SNX16
FGD4
CER1
IER5L
DNMT3B
DAGLB
NANOG
FBP1
LIN28B
PPP1R16B
MTRNR2L2
RIF1
GIMAP5
KIFBP
FBXO40
FZD2
CCDC169-SOHLH2
CCDC169
LRRTM3
SPIC
JPT1
PDPN
USP44
ZNF532
PDCL
SLC2A14
FGFR2
CEP41
MTRNR2L8
TUBB
DHX32
DGLUCY
GDF3
LRRTM4
BFSP1
TIMP4
SFRP2
RFX4
ADA2
FOXP1
CARHSP1
SASH1
GET3
AK4
WDR49
DDX3X
AHCYL2
TBC1D16
UGT1A6
TNC
FAM120B
NDST1
WNT5B
ACVR1
ANK2
MACROH2A1
CAMTA1
ALDH7A1
C20orf96
ST18
SLC7A5
AASDH
SGMS2
PITPNM2
VOPP1
SRSF7
PXMP4
SLFN12
DPPA4
CCDC92
PRRC2B
CCN2
GCNT2
STMN1
CFLAR
SLC16A13
CDH10
DISP3
TESK2
BRINP2
DACT3
KLF5
OSBPL1A
EPB41L1
CNGA1
CFAP20
DICER1
CELSR3
KCNIP4
F11
PALM2AKAP2
RGS3
TACC2
ACSL1
LINGO1
MBOAT2
CD200
ZNF202
CTNND2
HOXB1
C22orf39
HSPH1
DHX8
HES5
LIN28A
PPP1R18
SMAD3
ARHGAP42
GEMIN7
LLGL1
DCLK1
SMARCAD1
GADD45A
YLPM1
CCL2
FAM153B
CAAP1
DET1
TUT1
CNR2
TCHP
ISL2
SLC10A2
RNF213
PLAGL1
SP5
ZFYVE1
MEF2C
SET
C1R
RAD54B
IFIT3
EGR3
ERGIC2
DHRS3
LYPD1
CCDC167
IL17RD
PWWP2A
PES1
TRDMT1
ETFB
STK32C
LRRC27
KRT8
PCYT1B
NEDD9
ZNF627
AKIRIN1
E2F7
SAXO1
RRAGA
RBM39
ZSWIM4
RNF19A
TRPM3
MDK
ITGB1
AFF1
ZNF318
TMEFF1
FAT1
ACCS
RGPD2
RGPD1
HEXIM2
FAM181A
TRIM22
JAG1
SMIM14
ARF4
TCN2
ABCB8
HNRNPDL
FSBP
TSNAXIP1
RANBP10
ATAT1
IPO11
ENOPH1
HLTF
CNN3
GSPT2
PDE4D
SYAP1
TMEM114
IL23A
SYNPO2
ZNF37A
ZNF358
YWHAQ
CCDC200
RBBP6
LPCAT4
ZNF469
ADAR
ZCCHC12
SPAG9
PCDHB5
STOX2
DTNA
ADNP
ACTR1A
POLDIP3
RNF43
ESR1
C1orf127
NFE2
DERA
TSGA10IP
EXOC5
AP5M1
UQCRQ
GDF9
GDF5
CEP250
SPHK2
SPAG4
ZNF763
AMOTL2
SLC2A11
WBP11
INKA2
C12orf60
HIP1R
CDK12
MMACHC
SLCO4C1
TNFRSF21
DLG2
MMP10
PSME3IP1
TMPRSS7
KLHL4
RSPH14
RASSF8
ZNF254
TFDP2
CCDC130
SCOC
CALD1
RSPRY1
METTL7A
ZNF649
GALNT8
ZCCHC8
RIMBP2
POLR3E
ABAT
MAP2K5
SMARCB1
BLOC1S4
PAIP2
GFRA1
PCDHB13
PBLD
HNRNPH3
SUCLA2
RBMX
PCDHGC4
GRHL2
DPPA2
PYDC5
MTRNR2L9
IFI16
PTGS1
ELOVL5
EGFR
ZNF506
STAG3
GPC2
PKNOX2
SOX5
PTCD2
MRPS27
KLHL5
PRR5L
DNM1L
KLF17
SIRT4
RFFL
PROM1
NASP
RCOR1
RIMKLB
CCNG2
ATAD2
BCL9
TLE3
LCOR
ZCCHC14
PAG1
KIF21A
ARHGEF37
CHD8
TINAGL1
DNM2
PDE4B
HNRNPUL1
CCDC146
G3BP2
MRGPRX3
ID1
HEXIM1
ZBTB18
TBC1D17
DDX5
AKT1S1
COPS7A
ERBB2
GXYLT2
TSPAN19
LRRIQ1
BTBD3
CHMP7
IREB2
USP53
PACRGL
ZNF180
PRM3
CDH6
SHROOM3
RAB4B
TUT7
BCAT1
CYP4F11
PAXBP1
RAB34
FAM220A
RAP1A
OGT
ADGRA1
SMARCA2
PHLDB2
IFTAP
RPL15
KMT5C
RGS12
NUFIP2
ZBTB26
PGM2L1
MAP1B
SERPINB6
HES6
MS4A12
PTX3
OLIG3
HNRNPC
RAB25
PEX11G
ZNF474
KIAA1522
IPO4
MAST4
UBR2
NUP214
EIF1AX
CALR3
C19orf44
TBC1D10B
RBBP9
MYLPF
SLC2A4
MIDN
ETFDH
C4orf46
ACSBG2
XAB2
TSTD2
NCBP1
YIPF3
POLR1C
ZSCAN10
GBA
MRPS30
FAM76B
CEP57
KCNMB2
TPCN1
IQCD
RFX1
ARHGEF19
GAS2L3
ZNF250
PBX1
GID4
ATPAF2
PLEKHA5
FZD1
TMX2
MED19
POU2F1
NEMF
CRISPLD1
PQBP1
TIMM17B
MEIG1
RAPGEF5
MTUS1
ZNF101
DPP4
NELFCD
TCF20
TAL1
KCTD6
ZNF3
SLAIN1
RPUSD4
FAM118B
CCL26
SEC22B
ITGB8
MAP2
CLIP1
EXOSC2
IGSF9
LIFR
GRIN3A
H4C9
ILF2
RBP1
KXD1
FGF19
MMRN1
YWHAG
PRKRIP1
CD300LB
PPP1R15A
GPBP1
BTG1
RNF44
RND1
QPRT
FOXN3
CHMP4B
CPA5
ZNF593
C1orf232
PRTFDC1
LYSMD3
RBPJ
NR2F1
NEK2
CCDC172
BPNT2
NLGN1
SLC4A2
CDK5
XPC
LSM3
ENOX2
RGSL1
ANKRD6
PLEKHG2
ZBTB20
ZSCAN12
FEM1A
LDAH
CLPB
RAB5C
ZNF85
HNRNPL
STAU2
HIP1
GRAMD2B
ADD2
LMAN2L
ZHX3
VCPKMT
PTPRZ1
SPTBN1
ZNF576
TTC39B
IRGQ
UBE2T
APPL2
BSDC1
CCDC171
SUFU
MCTS1
ZIK1
CDK16
FAM102A
DDX20
DCLRE1C
PTPRD
NTMT1
ZNF273
FMNL3
ZMAT2
CHD9
MTDH
WTAP
WDR33
SOD2
BMPR2
RIPOR3
CABYR
NODAL
OXNAD1
DSE
DPH3
ABLIM1
ZSCAN18
SMC3
CIAO2A
ZNF548
TBC1D9
TSPYL4
KMT5A
EID3
NCLN
PTPN12
INSYN2B
ZBTB38
NDUFS7
LRRC23
ING4
DYRK1B
SCNN1A
MMP11
CA8
SLC35G4
GNA12
DOCK9
LGR6
DYNLL1
DACH2
KBTBD2