ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10407084 | Esophageal squamous carcinoma cell line
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◣ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MTF2
FAM227A
CBY1
NDUFB5
MRPL47
DDX17
MCCC1
PLPP2
FUZ
IQCH
AAGAB
PHF5A
ACO2
NEBL
WDR74
PTMA
KMT2B
JUP
ZSCAN2
HMGB1
ZNF37A
PXMP4
OR7C1
OR7A5
EMC9
KRTAP3-1
F11R
CNP
CNKSR3
ARID2
NRARP
PMEPA1
DST
GRK6
KLHL24
IPO4
TUT1
H3-3B
TMCC1
YLPM1
CCT2
TJP2
POLDIP3
NOTCH1
SVIL
CPNE2
IFRD1
NDST1
HGS
ARL16
PLEKHG1
ACP3
SPRED2
DNAH5
CHD8
FBXL19
SLC16A13
HDAC9
SINHCAF
MTHFD1
TMUB2
CEP63
ANAPC13
KRT6A
EP300
CEP41
TSNAXIP1
RANBP10
ICE1
TRMT2A
RANBP1
OGA
SPRY4
SRSF7
SPHK1
SIX2
SLC33A1
OAZ2
NDE1
PIN4
JPT1
TNRC18
ETV6
WDFY2
CCL26
SFPQ
CFL1
UBQLN4
LAMTOR2
PRMT5
ZBTB40
ZNF117
CD2BP2
ZNF106
SIRT4
PDIA4
SOX2
GET3
DNAJC16
PELATON
CSRNP2
TUBB
GTF2H4
MAPRE2
FAM83A
CFAP20
G3BP1
S100A16
ARIH1
TOMM40L
ARHGDIB
OTX2
DGLUCY
ZFAND3
ADAM28
NDUFS2
UFD1
CDC45
TIAL1
ATAT1
PPP6R1
H4C9
WDR36
SENP8
MYO9A
RCOR1
NRL
DCAF11
TMPRSS4
MLEC
ADAR
PRRC2B
RHOBTB2
EPHA2
RPL27
ZNF304
PIF1
ITGB1
RBBP8NL
PRKDC
MCM4
SLC12A7
CDC42SE1
OSGEP
APEX1
PEMT
RASAL2
ZDHHC5
UQCRQ
GDF9
TOMM40
PIK3R3
FOXA1
CAPRIN1
FAM220A
ZNF76
ID1
ARHGEF19
DLX5
GBA
TNFAIP8
GADD45G
EXOC5
AP5M1
RIOX1
CUEDC1
ABCC5
H4C14
H4C15
LDAH
SSBP1
RBM25
FOXO6
DPP3
NEK10
MCTS1
ZFP36L1
SLC25A11
RNF167
PARP2
GSTP1
ZNF286A
DKK3
KRT15
CHD6
HEXIM2
ADNP
GPR158
GSN
KCNN2
CELF3
KDM2A
CEP170
SDCCAG8
METTL9
CLDN4
VPREB3
GOLGB1
OGT
GPR137
ASXL1
ZSCAN9
LGR6
LRRC45
CENPX
ITPKB
PPIH
SNRPN
ETV4
KLHL13
CRKL
TRIM29
MOBP
SPAG9
YDJC
SLCO1B3
TTC13
ARV1
ACOT2
TBC1D17
AKT1S1
ZNF268
EMSY
SPAG4
MAP3K9
VPS50
HEPACAM2
WBP1L
SLC25A36
HLTF
PNN
KIAA0319
DACT3
SLC45A4
CLEC9A
CCDC130
XAB2
TRIM2
CELSR3
PGM2L1
CLUAP1
GDF5
CEP250
COPS7A
ANKRD65
CCDC174
SDR39U1
HEXIM1
ARID1A
RBMX
ZNF250
BTG1
PCBP2
TRIP4
FLAD1
SH3GL3
MEF2C
SDHD
MRPL1
MTA3
KCNG3
RGS22
GSDMC
NGDN
MRPL16
SPATA12
OARD1
NFYA
RFX1
RBM47
RNF216
ZFC3H1
THAP2
CSTF1
AURKA
EPB41L1
HNRNPL
TESK2
ANO3
WFDC8
DHX8
RTRAF
ANXA11
GALK2
COPS2
MGAT5B
GFM2
PTGES2
ESRP1
SRP14
TBCCD1
DNAJB11
ZNF688
IFT52
PPP2R5C
PPP1R42
BFSP1
HNRNPC
NEMF
CLP1
KAT7
TMEM265
HSPH1
ELOVL5
ENOX2
POU2F1
TMEM52
METTL3
CD55
SMIM5
SHF
POLR3E
DDX5
FGF1
SLC39A9
ERH
MRPL21
IGHMBP2
RAB30
SCOC
SLC25A45
STUM
SENP2
VKORC1
GLO1
PLAGL1
ING4
CTXN3
RAD52
HOXA9
NATD1
PIK3C2G
ZNF695
SMC1B
RIBC2
ZNF195
BTRC
BCL11B
KIAA1671
CFAP45
ELL
HOXD3
KIF2C
CSNK1E
MANSC1
YWHAG
SF3A3
RPL3
TEDC1
IL1A
CALD1
ZNF222
RFFL
COX8A
VPS8
INO80C
GPR141
IL7R
HCAR2
STAU1
DDX27
MAD2L1BP
GTPBP2
OR13C2
EIF4A2
ITPRIP
FNIP2
C3orf20
SOX6
MSANTD4
NRCAM
NUDT19
DCXR
H4C12
SLC35E2A
EMP1
DAPP1
EPHX4
RBM39
CTH
TBC1D10B
MYLPF
C12orf57
TNRC6B
NUMA1
LRTOMT
TEN1
ACOX1
RAP2A
NKIRAS1
NF2
KHSRP
POLG
PALD1
KDM3A
RBBP9
BAZ2A
CEP70
BMF
DPP9
CEP128
SPRED1
PTPRH
RNF43
SPRING1
RNFT2
CLPB
LIFR
IGBP1
THOC5
ETV1
PWWP2A
RPA2
PACSIN2
ABI1
C1RL
ZFP90
NUF2
XPO6
MTHFD2
ZCCHC8
DAAM1
RMND1
ARMT1
CYP21A2
KRT13
ZNFX1
GBF1
MRPL3
POLR2H
DRG2
PHF12
EPHB3
COX7A2
RBM23
UTP3
NADK2
HBP1
TTI2
NCBP2AS2
NCBP2
EIF1AD
BANF1
DCAF15
FOLH1
CLN3
CDK12
GCDH
TOM1L2
DRC3
ZSCAN20
ZNF839
WBP2
PICK1
ILF2
IP6K2
PSME3IP1
RSPRY1
KMT5A
CMSS1
C6orf226
ZC3H10
ZNF624
GATB
MRPL34
EIF5
CEP295
CHMP4B
DDX11
EEF1G
ZFYVE1
FBRS
RAD21
NFATC2IP
PSMD3
REST
SACS
PIPOX
METTL11B
DNMBP
NRG1
OBI1
PRICKLE1
SRRM4
MED12
HESX1
VENTX
TDGF1
NADK
PSMD9
HPD
ZNF343
SNX16
FGD4
CER1
IER5L
DNMT3B
DAGLB
NANOG
FBP1
LIN28B
PPP1R16B
MTRNR2L2
RIF1
GIMAP5
CYTH2
KIFBP
FBXO40
FZD2
CCDC169-SOHLH2
CCDC169
LRRTM3
SPIC
PDPN
USP44
ZNF532
PDCL
CDC14B
SLC2A14
FGFR2
MTRNR2L8
GPSM3
DHX32
NDUFS5
ZNF775
GDF3
LRRTM4
TIMP4
SFRP2
RFX4
EEF1A1
TES
ADA2
FOXP1
CARHSP1
SASH1
DUSP12
AK4
WDR49
DDX3X
AHCYL2
TBC1D16
UGT1A6
TNC
FAM120B
SNAPC3
WNT5B
ACVR1
ANK2
MACROH2A1
VANGL2
CAMTA1
ALDH7A1
C20orf96
ST18
SLC7A5
AASDH
SGMS2
PITPNM2
AUH
RTBDN
VOPP1
KLF7
SLFN12
DPPA4
CCDC92
TMEM41B
CCN2
GCNT2
STMN1
NUP160
CFLAR
MARCKS
CDH10
PGK1
DISP3
BRINP2
ZNF428
KLF5
VASH2
OSBPL1A
CNGA1
DICER1
KCNIP4
F11
SYNCRIP
PALM2AKAP2
RGS3
TACC2
SLCO5A1
ACSL1
LINGO1
ZBTB45
POLB
MBOAT2
CD200
ZNF202
HMGN1
CTNND2
ANAPC15
HOXB1
KNTC1
ERMN
C22orf39
HES5
LIN28A
PPP1R18
SMAD3
ARHGAP42
ESRRA
GEMIN7
LLGL1
DCLK1
SMARCAD1
GADD45A
WASF1
CDC40
VEZT
FGD6
PLCH1
CCL2
FAM153B
CAAP1
DET1
CNR2
TCHP
ISL2
ARID5A
SLC10A2
RNF213
CTTNBP2NL
PPME1
C2CD3
SP5
SET
C1R
CHN2
RAD54B
IFIT3
THEM4
EGR3
ERGIC2
DHRS3
CLCF1
LYPD1
CCDC167
YEATS2
TLX3
IL17RD
PES1
ST6GAL1
TRDMT1
ETFB
STK32C
LRRC27
KRT8
PCYT1B
NEDD9
ZNF627
AKIRIN1
LIMCH1
E2F7
SAXO1
RRAGA
ZSWIM4
RNF19A
TRPM3
PCDHB8
MDK
AFF1
ZNF318
TMEFF1
ZBTB8OS
RBBP4
FAT1
ADRM1
ACCS
RGPD2
RGPD1
FAM181A
TRIM22
TIA1
JAG1
BORCS6
SMIM14
MOSPD3
ARF4
TCN2
KIAA0895L
ABCB8
HNRNPDL
FSBP
IPO11
ENOPH1
CNN3
GSPT2
PDE4D
SYAP1
CCDC88A
TMEM114
IL23A
ZBTB6
SYNPO2
ZNF358
YWHAQ
CCDC200
RBBP6
LPCAT4
PSMB7
ZNF469
ZCCHC12
PCDHB5
STOX2
HSPA13
DTNA
ACTR1A
ESR1
C1orf127
NFE2
DERA
BBS7
TSGA10IP
CPVL
AKAP9
FILIP1L
SPHK2
TRAK2
STRADB
LPP
SYTL2
ZNF763
AMOTL2
SLC2A11
WBP11
RRBP1
PELI1
INKA2
C12orf60
HIP1R
MMACHC
SLCO4C1
TNFRSF21
HACL1
BTD
DLG2
TCF4
MMP10
H2AZ2
PDP1
TMPRSS7
KLHL4
RSF1
AAMDC
RSPH14
RASSF8
ZNF254
TFDP2
CDK5R1
VGF
HEBP2
METTL7A
SYBU
PIMREG
ZNF649
GALNT8
RIMBP2
ABAT
MAP2K5
SMARCB1
BLOC1S4
PAIP2
GFRA1
PCDHB13
PER2
PBLD
HNRNPH3
SUCLA2
PCDHGC4
GRHL2
DPPA2
PYDC5
MTRNR2L9
IFI16
PTGS1
EGFR
ZNF506
STAG3
GPC2
PKNOX2
SOX5
PTCD2
MRPS27
KLHL5
PRR5L
DNM1L
KLF17
TTF2
PROM1
NASP
RIMKLB
CCNG2
ATAD2
BCL9
TLE3
LCOR
ZNF608
AFAP1
INSM1
INTS9
HMBOX1
C11orf58
ZCCHC14
PAG1
SNX27
KIF21A
ARHGEF37
TINAGL1
DNM2
PDE4B
HNRNPUL1
CCDC146
G3BP2
LOC389199
MRGPRX3
ZBTB18
ERBB2
TBC1D31
GXYLT2
TSPAN19
LRRIQ1
BTBD3
CHMP7
IREB2
USP53
PACRGL
LTBP1
ZNF180
PRM3
CDH6
SHROOM3
RAB4B
PNRC1
TUT7
BCAT1
CYP4F11
PAXBP1
RAB34
TAX1BP3
EMC6
RAP1A
ADGRA1
SMARCA2
PHLDB2
RABGAP1L
IFTAP
C6orf132
C2CD4D
RPL15
ARHGAP24
MCM7
KMT5C
AP4M1
RGS12
ZSCAN31
NUFIP2
ZBTB26
MAP1B
SERPINB6
HES6
MS4A12
LNX1
PTX3
OLIG3
RAB25
PEX11G
ZNF474
KIAA1522
NARF
MAST4
UBR2
TRIB1
NUP214
EIF1AX
CALR3
C19orf44
SLC2A4
MIDN
ETFDH
C4orf46
ACSBG2
TMEM132A
LDB1
TSTD2
NCBP1
YIPF3
POLR1C
ZSCAN10
MRPS30
FAM76B
CEP57
KCNMB2
UBTD2
IGF1
TPCN1
IQCD
CCPG1
C15orf65
GAS2L3
PBX1
GID4
ATPAF2
PLEKHA5
FZD1
CITED2
TMX2
MED19
SMC4
IFT80
CRISPLD1
PQBP1
TIMM17B
MEIG1
RAPGEF5
MTUS1
ZNF101
DPP4
NELFCD
TCF20
KANSL1L
ZNF292
TAL1
KCTD6
ZNF3
SLAIN1
RPUSD4
FAM118B
GOLPH3L
SEC22B
ITGB8
MAP2
CPSF4L
CLIP1
EXOSC2
IGSF9
GRIN3A
RBP1
KXD1
FGF19
MMRN1
APH1A
ZBED5
PRKRIP1
CD300LB
PPP1R15A
MEGF9
ERV3-1-ZNF117
ERV3-1
TSPAN13
GPBP1
RNF44
RND1
QPRT
FOXN3
CPA5
ZNF593
C1orf232
PRTFDC1
LYSMD3
GGH
RBPJ
NR2F1
NEK2
CCDC172
BPNT2
NLGN1
SAPCD2
SLC4A2
CDK5
XPC
LSM3
RGSL1
ANKRD6
PLEKHG2
ZBTB20
ST7
SLC3A2
ZSCAN12
FEM1A
RAB5C
ZNF85
CDK5RAP2
STAU2
HIP1
GRAMD2B
ADD2
LMAN2L
ZHX3
VCPKMT
PTPRZ1
SPTBN1