ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6101128 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◣ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

REST
MED12
JPT1
SPIC
RIF1
SOX6
MTF2
UGT1A6
NRG1
OBI1
ZNF343
KLF5
ABCB8
CFLAR
PRICKLE1
VANGL2
FLAD1
DUSP12
NADK
GSN
PROM1
PMEPA1
WDR74
KIFBP
SLC2A11
DERA
FOXP1
CCDC200
STMN1
OTX2
SNRPN
TDGF1
ZNF318
FEZ2
MBOAT2
IER5L
ZNF469
PRRC2B
MRGPRX3
PDCL
FGD4
FBXO40
LRRTM4
FAM227A
CBY1
DEFB108B
SNX16
RASSF8
CCL2
NOTCH1
DPPA2
CNR2
LINGO1
IFRD1
GLIPR2
DNMBP
LDAH
WDFY2
RIMKLB
C1R
DISP3
SET
TRIML2
SEC22B
SLC35G4
SLC35G5
AK4
MS4A12
DAGLB
TMEM202
SLC7A7
CNGA1
ZNF532
ADA2
FASTKD1
CYTH2
MDK
TUBB
KRT8
LIN28A
CLEC9A
WARS1
PINK1
ELP6
UFD1
CDC45
ZNF37A
SEPHS2
SLFN12
RAPH1
CAAP1
CCDC169-SOHLH2
CCDC169
FBXL19
SUCLA2
SLCO4C1
GCNT2
FAM169A
SLC35G3
ZSCAN2
VMO1
GDF3
TTC23L
CHMP7
INKA2
DDX20
PPP1R8
HDAC9
FOXO6
GEMIN7
SRRM4
NDUFAF3
DALRD3
WDR11
DHRS3
SMARCB1
GADD45G
TRIM22
MTRNR2L2
CEP41
ARHGAP42
F11
BLOC1S4
AMOTL2
ZNF777
TNFAIP8L1
PTMA
CAPRIN1
SERPINB6
RUNX1T1
MX1
LEKR1
DDX3X
DCLK1
CEP85L
DGLUCY
ANKDD1B
CILK1
GXYLT1
FANK1
MED15
ZNF587
TRIM60
CCDC92
ACSBG2
WASF1
CDC40
TSTD2
NCBP1
OGT
COX7B
AASDH
DET1
LACTBL1
FKBP7
GPR1
ARMCX5-GPRASP2
ARMCX5
PSMD9
HPD
OLIG3
IFIT3
MPPE1
SLC2A14
IGF1
ARHGAP18
C22orf39
CELF3
ZIK1
FILIP1L
HHIPL1
CCDC85C
AUH
LUC7L2
FMC1-LUC7L2
FMC1
CSRNP2
LMAN2L
CEP78
ST18
ALAD
NDUFB5
MRPL47
H2AC15
H2BC15
NMRK2
TACC2
HEXIM1
CCNG2
NUBP1
ARHGEF11
VENTX
SLAIN2
FNBP1L
HMGCL
THEM4
MANSC1
MACROH2A1
ANAPC15
ZNF630
GAB2
TJP3
KLF7
CAMKV
IER3
SHROOM3
GRK6
LPP
PLAGL1
NCLN
DLG3
FBP1
EPB41L1
PHLDB2
PRDM1
NRARP
SMARCAD1
RAD54B
FSBP
RIOX1
UFSP2
NUFIP2
RUFY1
ETV1
ZNF524
SRPK2
FIZ1
SH2D4A
TMCC1
LRRTM3
TMEM114
LEMD2
EFNA1
KCNN2
CFL1
UBQLN4
LAMTOR2
LMNA
PCDHA10
MEX3A
ZNF775
NASP
ZNF140
SACS
ANK3
CD200
EID3
ANP32B
ESRP1
DYRK1B
KLHL12
HSPH1
CD300LB
RBM41
RNASEH1
HESX1
FRAT1
YPEL2
TIMM50
KMT2B
MAD2L1BP
GTPBP2
FIG4
AK9
CCDC90B
EVI5
HES2
PPP2R2A
NUP62
IL4I1
ATF5
ST3GAL4
PTHLH
PITPNM2
NUP160
CALD1
CABYR
STK38
AHCYL2
CCDC167
RSPH14
ZNF14
CLIC6
GLIPR1L2
PRSS47
LTBP1
PUM2
PHAX
DNMT3A
KIAA0895L
PALB2
DCTN5
CDX2
FUZ
USP11
SASH1
TMEM220
C9orf16
NDE1
MARF1
GABARAP
ZNF48
TCF4
FNIP2
TSPAN14
GID4
ATPAF2
TP53INP2
FAM120B
IZUMO1
ZNF561
UACA
DMRTA2
TMEM237
TNPO2
EXOSC5
BCKDHA
KHSRP
PTPN12
EIF4E3
ETV6
RAP1A
ZNF668
PIPOX
METTL11B
HMGB1
PLPP2
DDX17
MOBP
WFDC8
CER1
DNMT3B
ADAM28
ARID2
NANOG
PHF5A
ACO2
LIN28B
ETV4
PPP1R16B
GIMAP5
FZD2
HGS
ARL16
IQCH
AAGAB
ZFC3H1
PDPN
USP44
THAP2
CCT2
ITPRIP
CDC14B
FGFR2
MTRNR2L8
GPSM3
DHX32
NDUFS5
WBP1L
BFSP1
MCCC1
TIMP4
SFRP2
RFX4
EEF1A1
TES
ARIH1
KDM2A
TNRC18
TJP2
CARHSP1
NEBL
ZNF304
GET3
WDR49
DST
TBC1D16
SPRY4
TNC
SINHCAF
NDST1
PLEKHG1
SNAPC3
H3-3B
WNT5B
ACVR1
ANK2
TOMM40
CAMTA1
ALDH7A1
C20orf96
SLC7A5
CHD6
SGMS2
RTBDN
SIX2
VOPP1
SLC33A1
KDM3A
PDIA4
SRSF7
PXMP4
DPPA4
ZNF195
SLC25A36
TMUB2
WDR36
TMEM41B
CCN2
MSANTD4
NRCAM
MARCKS
ZSCAN9
SLC16A13
CDH10
PGK1
TESK2
BRINP2
ZNF428
DACT3
VASH2
OSBPL1A
PIK3R3
CFAP20
SHF
KRTAP3-1
DICER1
CELSR3
KCNIP4
TRMT2A
RANBP1
SYNCRIP
PALM2AKAP2
RGS3
PIN4
SLCO5A1
OGA
ACSL1
ZBTB45
POLB
RASAL2
ZNF202
HMGN1
CTNND2
CD2BP2
HOXB1
KNTC1
ERMN
DPP3
DHX8
HES5
PPP1R18
SMAD3
ESRRA
EMC9
TIAL1
SH3GL3
LLGL1
GADD45A
SLC25A11
RNF167
VEZT
FGD6
PLCH1
YLPM1
FAM153B
PIF1
TUT1
CEP170
TCHP
ISL2
ARID5A
SLC10A2
SDCCAG8
OAZ2
RNF213
CTTNBP2NL
RAB30
G3BP1
KLHL24
JUP
PPME1
C2CD3
SP5
ZFYVE1
MEF2C
CHN2
EMSY
ZFAND3
F11R
SFPQ
EGR3
ERGIC2
SPATA12
CLCF1
LYPD1
H4C14
YEATS2
TLX3
IL17RD
PWWP2A
PES1
ST6GAL1
TRDMT1
ETFB
STK32C
LRRC27
PCYT1B
NEDD9
ZNF627
GOLGB1
AKIRIN1
LIMCH1
CEP63
ANAPC13
ZBTB40
E2F7
ZDHHC5
SAXO1
RRAGA
RBM39
ZSWIM4
RNF19A
TRPM3
PCDHB8
ITGB1
AFF1
TMEFF1
ZBTB8OS
RBBP4
FAT1
ADRM1
ACCS
RGPD2
RGPD1
HEXIM2
FAM181A
CNP
TIA1
JAG1
BORCS6
SMIM14
MOSPD3
ARF4
TCN2
HNRNPDL
EP300
TSNAXIP1
RANBP10
RPL27
ATAT1
IPO11
ENOPH1
HLTF
CNN3
GSPT2
PDE4D
SYAP1
CCDC88A
IL23A
CNKSR3
ZBTB6
SYNPO2
ZNF358
YWHAQ
RBBP6
HBP1
LPCAT4
PSMB7
ADAR
ZCCHC12
SPAG9
PCDHB5
STOX2
NKIRAS1
SENP8
MYO9A
H4C15
HSPA13
DTNA
ADNP
ACTR1A
GFM2
POLDIP3
RNF43
ESR1
C1orf127
NFE2
BBS7
TSGA10IP
EXOC5
AP5M1
UQCRQ
GDF9
CPVL
AKAP9
IP6K2
GDF5
CEP250
OARD1
NFYA
SPHK2
SPAG4
TRAK2
STRADB
SYTL2
ZNF106
ZNF763
WBP11
RRBP1
PELI1
C12orf60
HIP1R
CDK12
MMACHC
TNFRSF21
HACL1
BTD
DLG2
MMP10
H2AZ2
PSME3IP1
PDP1
SPHK1
TMPRSS7
DLX5
KLHL4
RSF1
AAMDC
ZNF254
TFDP2
CDK5R1
CCDC130
SCOC
VGF
HEBP2
RSPRY1
METTL7A
SYBU
PIMREG
ZNF649
GALNT8
ZCCHC8
RIMBP2
POLR3E
ABAT
MAP2K5
PAIP2
GFRA1
PCDHB13
PER2
PBLD
HNRNPH3
RBMX
PCDHGC4
GRHL2
PYDC5
MTRNR2L9
IFI16
PTGS1
ELOVL5
EGFR
ZNF506
STAG3
GPC2
PKNOX2
SOX5
PTCD2
MRPS27
KLHL5
PRR5L
DNM1L
KLF17
TTF2
SIRT4
RFFL
RCOR1
ATAD2
BCL9
TLE3
LCOR
ZNF608
AFAP1
INSM1
INTS9
HMBOX1
C11orf58
MAP3K9
ZCCHC14
PAG1
SNX27
KIF21A
ARHGEF37
CHD8
TINAGL1
DNM2
PDE4B
HNRNPUL1
CCDC146
G3BP2
LOC389199
SDHD
ID1
ZBTB18
TBC1D17
DDX5
AKT1S1
COPS7A
ERBB2
TBC1D31
GXYLT2
TSPAN19
LRRIQ1
BTBD3
IREB2
USP53
PACRGL
ZNF180
PRM3
CDH6
RAB4B
PNRC1
TUT7
BCAT1
CYP4F11
PAXBP1
CTH
RAB34
FAM220A
TAX1BP3
EMC6
ADGRA1
SMARCA2
RABGAP1L
IFTAP
C6orf132
C2CD4D
RPL15
ARHGAP24
HOXA9
MCM7
KMT5C
AP4M1
RGS12
ZSCAN31
ZBTB26
PGM2L1
MAP1B
HES6
LNX1
PTX3
RTRAF
HNRNPC
RAB25
PEX11G
ZNF474
KIAA1522
IPO4
NARF
MAST4
UBR2
TRIB1
NUP214
EIF1AX
SPRING1
RNFT2
CALR3
C19orf44
TBC1D10B
RBBP9
MYLPF
SLC2A4
MIDN
ETFDH
C4orf46
TMEM132A
LDB1
XAB2
COX8A
BAZ2A
YIPF3
POLR1C
ZSCAN10
GBA
MRPS30
FAM76B
CEP57
KCNMB2
UBTD2
TPCN1
IQCD
RFX1
CCPG1
C15orf65
ARHGEF19
GAS2L3
ZNF250
PBX1
PLEKHA5
FZD1
CITED2
TMX2
MED19
POU2F1
NEMF
SMC4
IFT80
CRISPLD1
PQBP1
TIMM17B
MEIG1
RAPGEF5
MTUS1
ZNF101
DPP4
NELFCD
GTF2H4
TCF20
KANSL1L
ZNF292
TAL1
KCTD6
ZNF3
SLAIN1
RPUSD4
FAM118B
GOLPH3L
CCL26
ITGB8
MAP2
CPSF4L
CLIP1
EXOSC2
IGSF9
LIFR
GRIN3A
H4C9
ILF2
RBP1
KXD1
FGF19
MMRN1
YWHAG
APH1A
ZBED5
PRKRIP1
PPP1R15A
MEGF9
ERV3-1-ZNF117
ERV3-1
TSPAN13
GPBP1
BTG1
RNF44
RND1
QPRT
FOXN3
CHMP4B
CPA5
ZNF593
C1orf232
PRTFDC1
LYSMD3
GGH
RBPJ
NR2F1
NEK2
CCDC172
BPNT2
NLGN1
SAPCD2
ZNF268
SLC4A2
CDK5
XPC
LSM3
ENOX2
RGSL1
ANKRD6
PLEKHG2
ZBTB20
ST7
SLC3A2
ZSCAN12
OR13C2
FEM1A
CLPB
RAB5C
ZNF85
CDK5RAP2
HNRNPL
STAU2
HIP1
GRAMD2B
ADD2
ZHX3
VCPKMT
PTPRZ1
SPTBN1
ZNF576
TTC39B
IRGQ
UBE2T
APPL2
ZNF8
BSDC1
CCDC171
SUFU
MCTS1
SEPTIN9
CDK16
FAM102A
DCLRE1C
PTPRD
NTMT1
ZNF273
FMNL3
ZMAT2
CHD9
MTDH
WTAP
WDR33
SOD2
ZNF277
DOCK4
BMPR2
RIPOR3
ANKRD65
NODAL
OXNAD1
DSE
DPH3
ABLIM1
METTL9
ZSCAN18
SMC3
EIF3F
CIAO2A
ZNF548
TBC1D9
TSPYL4
KMT5A
INSYN2B
ZBTB38
NDUFS7
LRRC23
ING4
SCNN1A
MMP11
CA8
MAPK14
GNA12
ICE1
DOCK9
LGR6
DYNLL1
RAI14
DACH2
KBTBD2
AP3M2
EVI5L
IGDCC3
REEP6
PCSK4
CENPA
PRDM14
HLCS
SRPRA
C16orf78
GBF1
ACTR2
VMP1
PTRH2
CLIC1
MYO1B
LMO4
CPNE2
DDA1
ZNF335
EFCAB8
MTHFD1
MEA1
CX3CL1
ZNF737
TOMM40L
INTS12
GSTCD
ERICH6B
WLS
CHD7
SLC7A11
DAOA
GCDH
ZNF286A
NSMCE4A
SPEM1
RRAGD
NCOA4
SEL1L
PTPRK