ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852808 | LK-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◣ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
CELF3
ARID2
PTMA
MTF2
CCPG1
C15orf65
FAM227A
CBY1
NOTCH1
FUZ
TMCC1
TARS3
C2CD4D
NDUFB5
MRPL47
IFRD1
ERMN
SNX27
PIPOX
GSN
SLC12A7
RNF145
GGH
MARCKS
NRCAM
CCT2
MRO
SPHK1
TNRC18
VWA2
PLPP2
PLEKHG1
SPRY4
DCSTAMP
IGF1
SLCO5A1
ESRP1
KLF6
ARNT
KRTAP3-1
TMPRSS7
ETV1
PTPRO
THEMIS
REST
SACS
SOX6
OTX2
METTL11B
WDR74
DNMBP
HMGB1
NRG1
HDAC9
OBI1
PRICKLE1
SRRM4
SNRPN
FLAD1
GRK6
MED12
DDX17
HESX1
MOBP
VENTX
TDGF1
NADK
PMEPA1
WFDC8
PSMD9
HPD
ZNF343
SNX16
FGD4
CER1
IER5L
ZSCAN2
DNMT3B
GADD45G
DAGLB
ADAM28
NANOG
PHF5A
ACO2
FBP1
LIN28B
KMT2B
ETV4
PPP1R16B
MTRNR2L2
RIF1
GIMAP5
CYTH2
KIFBP
FBXL19
FBXO40
FZD2
CCDC169-SOHLH2
CCDC169
HGS
ARL16
IQCH
AAGAB
LRRTM3
SPIC
ZFC3H1
JPT1
PDPN
USP44
THAP2
ITPRIP
ZNF532
PDCL
CDC14B
SLC2A14
FGFR2
CEP41
MTRNR2L8
GPSM3
TUBB
DHX32
DGLUCY
NDUFS5
WBP1L
ZNF775
GDF3
LRRTM4
BFSP1
MCCC1
CAPRIN1
TIMP4
SFRP2
RFX4
WDFY2
EEF1A1
TES
ADA2
ARIH1
KDM2A
TJP2
FOXP1
CARHSP1
NEBL
ZNF304
SASH1
GET3
DUSP12
AK4
WDR49
DDX3X
AHCYL2
DST
TBC1D16
UGT1A6
TNC
SINHCAF
FAM120B
NDST1
SNAPC3
H3-3B
WNT5B
ACVR1
ANK2
MACROH2A1
TOMM40
VANGL2
CAMTA1
ALDH7A1
C20orf96
ST18
UFD1
CDC45
SLC7A5
CHD6
AASDH
SGMS2
PITPNM2
AUH
RTBDN
SIX2
VOPP1
SLC33A1
KDM3A
PDIA4
KCNN2
SRSF7
PXMP4
KLF7
SLFN12
DPPA4
ZNF195
CCDC92
PRRC2B
SLC25A36
TMUB2
WDR36
TMEM41B
CCN2
FOXO6
MSANTD4
GCNT2
STMN1
NUP160
CFLAR
ZSCAN9
SLC16A13
CDH10
CFL1
PGK1
DISP3
TESK2
BRINP2
ZNF428
DACT3
KLF5
VASH2
OSBPL1A
EPB41L1
CNGA1
PIK3R3
CFAP20
ETV6
SHF
DICER1
CELSR3
KCNIP4
F11
TRMT2A
RANBP1
SYNCRIP
PALM2AKAP2
RGS3
PIN4
TACC2
OGA
ACSL1
LINGO1
ZBTB45
POLB
RASAL2
MBOAT2
UBQLN4
CD200
ZNF202
HMGN1
CTNND2
ANAPC15
CD2BP2
HOXB1
KNTC1
DPP3
C22orf39
LAMTOR2
HSPH1
DHX8
HES5
CSRNP2
LIN28A
PPP1R18
SMAD3
ARHGAP42
ESRRA
EMC9
TIAL1
GEMIN7
SH3GL3
LLGL1
DCLK1
SMARCAD1
GADD45A
SLC25A11
RNF167
WASF1
CDC40
VEZT
FGD6
PLCH1
YLPM1
CCL2
FAM153B
PIF1
CAAP1
DET1
TUT1
CNR2
CEP170
TCHP
ISL2
ARID5A
SLC10A2
SDCCAG8
OAZ2
RNF213
CTTNBP2NL
RAB30
G3BP1
KLHL24
JUP
PPME1
C2CD3
PLAGL1
SP5
ZFYVE1
MEF2C
SET
C1R
CHN2
EMSY
ZFAND3
RAD54B
F11R
IFIT3
SFPQ
THEM4
EGR3
ERGIC2
DHRS3
SPATA12
CLCF1
LYPD1
H4C14
CCDC167
YEATS2
TLX3
IL17RD
PWWP2A
PES1
ST6GAL1
TRDMT1
ETFB
STK32C
LRRC27
KRT8
PCYT1B
NEDD9
ZNF627
GOLGB1
AKIRIN1
LIMCH1
CEP63
ANAPC13
ZBTB40
E2F7
ZDHHC5
SAXO1
RRAGA
RBM39
ZSWIM4
RNF19A
TRPM3
PCDHB8
MDK
ITGB1
AFF1
ZNF318
TMEFF1
ZBTB8OS
RBBP4
FAT1
ADRM1
ACCS
RGPD2
RGPD1
MANSC1
HEXIM2
FAM181A
CNP
TRIM22
TIA1
JAG1
BORCS6
SMIM14
MOSPD3
ARF4
TCN2
KIAA0895L
ABCB8
HNRNPDL
EP300
FSBP
TSNAXIP1
RANBP10
RPL27
ATAT1
IPO11
ENOPH1
HLTF
CNN3
GSPT2
PDE4D
SYAP1
CCDC88A
TMEM114
IL23A
CNKSR3
ZBTB6
SYNPO2
ZNF37A
ZNF358
YWHAQ
CCDC200
RBBP6
HBP1
LPCAT4
PSMB7
ZNF469
ADAR
ZCCHC12
SPAG9
PCDHB5
STOX2
NKIRAS1
SENP8
MYO9A
H4C15
HSPA13
DTNA
ADNP
ACTR1A
GFM2
POLDIP3
RNF43
ESR1
C1orf127
NFE2
DERA
BBS7
TSGA10IP
CLEC9A
EXOC5
AP5M1
UQCRQ
GDF9
CPVL
AKAP9
IP6K2
GDF5
CEP250
OARD1
NFYA
FILIP1L
SPHK2
SPAG4
TRAK2
STRADB
LPP
SYTL2
ZNF106
ZNF763
AMOTL2
SLC2A11
WBP11
RRBP1
PELI1
INKA2
C12orf60
HIP1R
CDK12
MMACHC
SLCO4C1
TNFRSF21
HACL1
BTD
DLG2
TCF4
MMP10
H2AZ2
PSME3IP1
PDP1
DLX5
KLHL4
RSF1
AAMDC
RSPH14
RASSF8
ZNF254
TFDP2
CDK5R1
CCDC130
SCOC
VGF
CALD1
HEBP2
RSPRY1
METTL7A
SYBU
PIMREG
ZNF649
GALNT8
ZCCHC8
RIMBP2
POLR3E
ABAT
MAP2K5
SMARCB1
BLOC1S4
PAIP2
GFRA1
PCDHB13
PER2
PBLD
HNRNPH3
SUCLA2
RBMX
PCDHGC4
GRHL2
DPPA2
PYDC5
MTRNR2L9
IFI16
PTGS1
ELOVL5
EGFR
ZNF506
STAG3
GPC2
PKNOX2
SOX5
PTCD2
MRPS27
KLHL5
PRR5L
DNM1L
KLF17
TTF2
SIRT4
RFFL
PROM1
NASP
RCOR1
RIMKLB
CCNG2
ATAD2
BCL9
TLE3
LCOR
ZNF608
AFAP1
INSM1
INTS9
HMBOX1
C11orf58
MAP3K9
ZCCHC14
PAG1
KIF21A
ARHGEF37
CHD8
TINAGL1
DNM2
PDE4B
HNRNPUL1
CCDC146
G3BP2
LOC389199
MRGPRX3
SDHD
ID1
HEXIM1
ZBTB18
TBC1D17
DDX5
AKT1S1
COPS7A
ERBB2
TBC1D31
GXYLT2
TSPAN19
LRRIQ1
BTBD3
CHMP7
IREB2
USP53
PACRGL
LTBP1
ZNF180
PRM3
CDH6
SHROOM3
RAB4B
PNRC1
TUT7
BCAT1
CYP4F11
PAXBP1
CTH
RAB34
FAM220A
TAX1BP3
EMC6
RAP1A
OGT
ADGRA1
SMARCA2
PHLDB2
RABGAP1L
IFTAP
C6orf132
RPL15
ARHGAP24
HOXA9
MCM7
KMT5C
AP4M1
RGS12
ZSCAN31
NUFIP2
ZBTB26
PGM2L1
MAP1B
SERPINB6
HES6
MS4A12
LNX1
PTX3
OLIG3
RTRAF
HNRNPC
RAB25
PEX11G
ZNF474
KIAA1522
IPO4
NARF
MAST4
UBR2
TRIB1
NUP214
EIF1AX
SPRING1
RNFT2
CALR3
C19orf44
TBC1D10B
RBBP9
MYLPF
SLC2A4
MIDN
ETFDH
C4orf46
ACSBG2
TMEM132A
LDB1
XAB2
TSTD2
NCBP1
COX8A
BAZ2A
YIPF3
POLR1C
ZSCAN10
GBA
MAD2L1BP
GTPBP2
MRPS30
FAM76B
CEP57
KCNMB2
UBTD2
TPCN1
IQCD
RFX1
ARHGEF19
GAS2L3
ZNF250
PBX1
GID4
ATPAF2
PLEKHA5
FZD1
CITED2
TMX2
MED19
POU2F1
NEMF
SMC4
IFT80
CRISPLD1
PQBP1
TIMM17B
MEIG1
RAPGEF5
MTUS1
ZNF101
DPP4
NELFCD
GTF2H4
TCF20
KANSL1L
ZNF292
TAL1
KCTD6
ZNF3
SLAIN1
RPUSD4
FAM118B
GOLPH3L
CCL26
SEC22B
ITGB8
MAP2
CPSF4L
CLIP1
EXOSC2
IGSF9
LIFR
GRIN3A
H4C9
ILF2
RBP1
KXD1
FGF19
MMRN1
YWHAG
APH1A
ZBED5
PRKRIP1
CD300LB
PPP1R15A
MEGF9
ERV3-1-ZNF117
ERV3-1
TSPAN13
GPBP1
BTG1
RNF44
RND1
QPRT
FOXN3
CHMP4B
CPA5
ZNF593
C1orf232
PRTFDC1
LYSMD3
RBPJ
NR2F1
NEK2
CCDC172
BPNT2
NLGN1
SAPCD2
ZNF268
SLC4A2
CDK5
XPC
LSM3
ENOX2
RGSL1
ANKRD6
PLEKHG2
ZBTB20
ST7
SLC3A2
ZSCAN12
OR13C2
FEM1A
LDAH
CLPB
RAB5C
ZNF85
CDK5RAP2
HNRNPL
STAU2
HIP1
GRAMD2B
ADD2
LMAN2L
ZHX3
VCPKMT
PTPRZ1
SPTBN1
ZNF576
TTC39B
IRGQ
FNBP1L
UBE2T
APPL2
ZNF8
BSDC1
CCDC171
SUFU
MCTS1
SEPTIN9
ZIK1
CDK16
FAM102A
DDX20
DCLRE1C
PTPRD
NTMT1
ZNF273
FMNL3
ZMAT2
CHD9
MTDH
WTAP
WDR33
SOD2
ZNF277
DOCK4
BMPR2
RIPOR3
CABYR
ANKRD65
NODAL
OXNAD1
DSE
DPH3
ABLIM1
METTL9
ZSCAN18
SMC3
EIF3F
CIAO2A
ZNF548
TBC1D9
TSPYL4
KMT5A
EID3
NCLN
PTPN12
INSYN2B
ZBTB38
NDUFS7
LRRC23
ING4
DYRK1B
SCNN1A
MMP11
CA8
SLC35G4
MAPK14
GNA12
ICE1
DOCK9
LGR6
DYNLL1
RAI14
DACH2
KBTBD2
AP3M2
EVI5L
IGDCC3
ZNF140
REEP6
PCSK4
TMEM220
CENPA
PRDM14
HLCS
RIOX1
SRPRA
C16orf78
GBF1
ACTR2
VMP1
PTRH2
CLIC1
NDE1
MYO1B
LMO4
ANK3
NUBP1
FEZ2
CPNE2
DDA1
ZNF335
UFSP2
EFCAB8
MTHFD1
MEA1
CX3CL1
ZNF737
TOMM40L
INTS12
GSTCD
ERICH6B
ZNF668
WLS
CHD7
SLC7A11
DAOA
GCDH
ZNF286A
NSMCE4A
SPEM1
RRAGD
NCOA4
SEL1L
PTPRK
CBX1
WARS1
TMEM202
SLC25A25
GREB1
MCM10
TAGLN3
PBDC1
NDUFB4
MFSD6
NIN
NME7
BLZF1
TMEM143
SYNGR4
FGF1
ACYP2
NRL
DCAF11
ZNF589
ZFHX2
PIK3CA
ODF2
TRIM38
NSUN6
ARL5B
AKR1A1
GJA1
BAZ1B
KHDRBS1
SOX2
CCDC124
HAS3
EMID1
KDELR2
GLI2
RAD23B
VPS50
HEPACAM2
TTI2
PRCC
HNRNPAB
FXR1
GPR137
YDJC
EIF4E3
ABCA1
CNIH4
KIF3C
RBM22
UQCRC1
GHITM
TCF7L2
PTP4A1
ABCB4
SLC6A9
DDX59
BAMBI
RTN4
RUNX1T1
SPPL2B
LSM7
HK2
MRPS15
KDM1A
KNL1
FRRS1L
SOX15
NAIF1
MAPRE2
BEND3
PANK2
ZNF197
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ADGRL2
ZNF747
ZNF253
CCDC174
ARHGAP18
TGIF1
APC2
ALPL
RPA2
ZBTB37
FAM174A
EXOSC5
BCKDHA
ATOH1
TMEM33
NOL4
FAM169A
CDC5L
CAMKV
PCBP2
PARP2
EHD4
ZNF91
CELF2
BZW2
LTBR
ZNF561
LRIG3
USPL1
PIP4P1
HECTD4
APBA2