ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX277134 | T.T
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◣ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
FAM227A
CBY1
NOTCH1
SINHCAF
HMGB1
PLPP2
FUZ
NDST1
KDM2A
NDUFB5
MRPL47
MTF2
DNM1L
PTMA
ZSCAN2
ANKRD65
SNX16
DPP3
ARIH1
CLCF1
KMT2B
FGF19
ESRP1
WDFY2
ARID2
WDR74
MTDH
MCCC1
ISL2
TINAGL1
PHF5A
ACO2
LYPD1
SPINT1
MYL12A
TGIF1
FBXL19
CNP
DISP3
SIX2
JUP
ADAM28
F11R
CHD6
KLF7
ALDH7A1
OLFML3
DDX17
ZNF775
IQCH
AAGAB
SH3GL3
TCF12
CCT2
GLI2
CEP41
ERGIC2
TIA1
KCNN2
CYTH2
CFL1
VASH2
POLR3E
HIPK1
ETV1
HNRNPDL
ENOPH1
DST
CAPRIN1
EP300
NUP160
NDUFS5
SLC16A13
ESRRA
CCDC200
OAZ2
FKBP7
CUEDC1
CPNE2
H3-3B
IFRD1
YWHAZ
KLK6
GRK6
SPHK1
PELATON
PMEPA1
SOX6
C11orf58
HNRNPC
KIF26B
ZFC3H1
THAP2
POLB
ZNF268
ZSCAN9
ZFAND3
TTF2
ZNF428
RHOBTB2
AHNAK2
SLC33A1
PIMREG
TIAL1
TMEM41B
ACTR1A
ITGB1
ZNF506
ST8SIA1
LPIN1
SYNCRIP
VAMP5
BCAS2
EFNA1
RSF1
AAMDC
TNRC18
SLC25A36
ATAT1
ETNK1
DMRTA2
NPIPB12
TJP2
GPR39
EXOSC2
PDIA4
RBM39
PDP1
SRSF7
FXR1
TENT5C
NPIPB5
ZNF195
EXOC5
AP5M1
ASMTL
FBRS
C6orf132
UBTD2
NASP
SLC2A4
ACOT1
TTC13
ARV1
MEF2C
KNTC1
TNFRSF21
PIN4
ZDHHC5
IVNS1ABP
SOX2
EMC9
ADRM1
EIF4A2
RTBDN
EIF1AX
TMCC1
CNIH4
PRORP
PPP2R3C
CSRNP2
TRIB1
PRDM2
NPIPB8
DHRS3
C15orf40
ZNF627
MYL12B
HMGN1
ZNF37A
MXD1
PGBD2
WDR36
TBC1D31
UBR2
CHD1L
PRKAB2
FOXO6
RBBP6
G3BP2
LNX1
GDF5
CEP250
SLCO5A1
ERV3-1-ZNF117
ERV3-1
CLDN4
MARCKS
RASAL2
S100A16
RAPGEFL1
HSPH1
RRBP1
ETFRF1
CFAP94
CSDE1
ZBTB6
SRSF6
GPSM3
H4C14
ZBTB37
TES
ADAR
TAX1BP3
EMC6
FAM83B
SLC41A3
GSN
CEP63
ANAPC13
C2CD5
ETFBKMT
NEBL
PDE4D
TOP1
DGLUCY
RABEP2
SPAG4
GPR158
HLTF
MCM7
AP4M1
LSG1
C15orf62
PLEKHG1
GADD45A
KRT6A
NWD1
CD55
ANKRD40
ZSWIM4
POU2F1
RAPGEF5
WDR33
NCOA4
SNAPC3
MSANTD4
CCDC88A
MAP3K9
EXD1
CHP1
TEX9
RFX7
TMUB2
HEXIM2
MTRNR2L2
KDM3A
PIF1
TLX3
RIOX1
GGPS1
ARID4B
S100A4
PSME3IP1
RSPRY1
MTA3
KCNG3
DDX5
TSPAN13
PTPN12
OGA
SPATA12
GTF2H4
SPRY4
ZNF763
NR1D1
GET3
NPIPB3
ZMAT2
THAP10
LRRC49
CHD8
CREM
DCBLD2
PWWP2A
ARF4
PSMB7
RTN4
DCLRE1B
AP4B1
KMT5B
ZNF669
YLPM1
EXPH5
PTPRH
KMT5A
VPS50
HEPACAM2
PNN
BORCS6
EEF1AKNMT
FGF1
SLC25A21
BRMS1L
CORO2B
ANKRD12
STAG3
GPC2
CA5B
RMND5A
RNF103-CHMP3
TNFAIP8
SLCO1A2
SF3B5
M6PR
KLRG1
ARPP19
NDUFS2
PARP2
CTXN3
LARS1
REST
SACS
OTX2
PIPOX
METTL11B
DNMBP
NRG1
HDAC9
OBI1
PRICKLE1
SRRM4
SNRPN
FLAD1
MED12
HESX1
MOBP
VENTX
TDGF1
NADK
WFDC8
PSMD9
HPD
ZNF343
FGD4
CER1
IER5L
CELF3
DNMT3B
GADD45G
DAGLB
NANOG
FBP1
LIN28B
ETV4
PPP1R16B
RIF1
GIMAP5
KIFBP
FBXO40
FZD2
CCDC169-SOHLH2
CCDC169
HGS
ARL16
LRRTM3
SPIC
JPT1
PDPN
USP44
ITPRIP
ZNF532
PDCL
CDC14B
SLC2A14
FGFR2
MTRNR2L8
TUBB
DHX32
WBP1L
GDF3
LRRTM4
BFSP1
TIMP4
SFRP2
RFX4
EEF1A1
ADA2
FOXP1
CARHSP1
ZNF304
SASH1
DUSP12
AK4
WDR49
DDX3X
AHCYL2
TBC1D16
UGT1A6
TNC
FAM120B
WNT5B
ACVR1
ANK2
MACROH2A1
TOMM40
VANGL2
CAMTA1
C20orf96
ST18
UFD1
CDC45
SLC7A5
AASDH
SGMS2
PITPNM2
AUH
VOPP1
PXMP4
SLFN12
DPPA4
CCDC92
PRRC2B
CCN2
GCNT2
NRCAM
STMN1
CFLAR
CDH10
PGK1
TESK2
BRINP2
DACT3
KLF5
OSBPL1A
EPB41L1
CNGA1
PIK3R3
CFAP20
ETV6
SHF
KRTAP3-1
DICER1
CELSR3
KCNIP4
F11
TRMT2A
RANBP1
PALM2AKAP2
RGS3
TACC2
ACSL1
LINGO1
ZBTB45
MBOAT2
UBQLN4
CD200
ZNF202
CTNND2
ANAPC15
CD2BP2
HOXB1
ERMN
C22orf39
LAMTOR2
DHX8
HES5
LIN28A
PPP1R18
SMAD3
ARHGAP42
GEMIN7
LLGL1
DCLK1
SMARCAD1
SLC25A11
RNF167
WASF1
CDC40
VEZT
FGD6
PLCH1
CCL2
FAM153B
CAAP1
DET1
TUT1
CNR2
CEP170
TCHP
ARID5A
SLC10A2
SDCCAG8
RNF213
CTTNBP2NL
RAB30
G3BP1
KLHL24
PPME1
C2CD3
PLAGL1
SP5
ZFYVE1
SET
C1R
CHN2
EMSY
RAD54B
IFIT3
SFPQ
THEM4
EGR3
CCDC167
YEATS2
IL17RD
PES1
ST6GAL1
TRDMT1
ETFB
STK32C
LRRC27
KRT8
PCYT1B
NEDD9
GOLGB1
AKIRIN1
LIMCH1
ZBTB40
E2F7
SAXO1
RRAGA
RNF19A
TRPM3
PCDHB8
MDK
AFF1
ZNF318
TMEFF1
ZBTB8OS
RBBP4
FAT1
ACCS
RGPD2
RGPD1
MANSC1
FAM181A
TRIM22
JAG1
SMIM14
MOSPD3
TCN2
KIAA0895L
ABCB8
FSBP
TSNAXIP1
RANBP10
RPL27
IPO11
CNN3
GSPT2
SYAP1
TMEM114
IL23A
CNKSR3
SYNPO2
ZNF358
YWHAQ
HBP1
LPCAT4
ZNF469
ZCCHC12
SPAG9
PCDHB5
STOX2
NKIRAS1
SENP8
MYO9A
H4C15
HSPA13
DTNA
ADNP
GFM2
POLDIP3
RNF43
ESR1
C1orf127
NFE2
DERA
BBS7
TSGA10IP
CLEC9A
UQCRQ
GDF9
CPVL
AKAP9
IP6K2
OARD1
NFYA
FILIP1L
SPHK2
TRAK2
STRADB
LPP
SYTL2
ZNF106
AMOTL2
SLC2A11
WBP11
PELI1
INKA2
C12orf60
HIP1R
CDK12
MMACHC
SLCO4C1
HACL1
BTD
DLG2
TCF4
MMP10
H2AZ2
TMPRSS7
DLX5
KLHL4
RSPH14
RASSF8
ZNF254
TFDP2
CDK5R1
CCDC130
SCOC
VGF
CALD1
HEBP2
METTL7A
SYBU
ZNF649
GALNT8
ZCCHC8
RIMBP2
ABAT
MAP2K5
SMARCB1
BLOC1S4
PAIP2
GFRA1
PCDHB13
PER2
PBLD
HNRNPH3
SUCLA2
RBMX
PCDHGC4
GRHL2
DPPA2
PYDC5
MTRNR2L9
IFI16
PTGS1
ELOVL5
EGFR
PKNOX2
SOX5
PTCD2
MRPS27
KLHL5
PRR5L
KLF17
SIRT4
RFFL
PROM1
RCOR1
RIMKLB
CCNG2
ATAD2
BCL9
TLE3
LCOR
ZNF608
AFAP1
INSM1
INTS9
HMBOX1
ZCCHC14
PAG1
SNX27
KIF21A
ARHGEF37
DNM2
PDE4B
HNRNPUL1
CCDC146
LOC389199
MRGPRX3
SDHD
ID1
HEXIM1
ZBTB18
TBC1D17
AKT1S1
COPS7A
ERBB2
GXYLT2
TSPAN19
LRRIQ1
BTBD3
CHMP7
IREB2
USP53
PACRGL
LTBP1
ZNF180
PRM3
CDH6
SHROOM3
RAB4B
PNRC1
TUT7
BCAT1
CYP4F11
PAXBP1
CTH
RAB34
FAM220A
RAP1A
OGT
ADGRA1
SMARCA2
PHLDB2
RABGAP1L
IFTAP
C2CD4D
RPL15
ARHGAP24
HOXA9
KMT5C
RGS12
ZSCAN31
NUFIP2
ZBTB26
PGM2L1
MAP1B
SERPINB6
HES6
MS4A12
PTX3
OLIG3
RTRAF
RAB25
PEX11G
ZNF474
KIAA1522
IPO4
NARF
MAST4
NUP214
SPRING1
RNFT2
CALR3
C19orf44
TBC1D10B
RBBP9
MYLPF
MIDN
ETFDH
C4orf46
ACSBG2
TMEM132A
LDB1
XAB2
TSTD2
NCBP1
COX8A
BAZ2A
YIPF3
POLR1C
ZSCAN10
GBA
MAD2L1BP
GTPBP2
MRPS30
FAM76B
CEP57
KCNMB2
IGF1
TPCN1
IQCD
RFX1
CCPG1
C15orf65
ARHGEF19
GAS2L3
ZNF250
PBX1
GID4
ATPAF2
PLEKHA5
FZD1
CITED2
TMX2
MED19
NEMF
SMC4
IFT80
CRISPLD1
PQBP1
TIMM17B
MEIG1
MTUS1
ZNF101
DPP4
NELFCD
TCF20
KANSL1L
ZNF292
TAL1
KCTD6
ZNF3
SLAIN1
RPUSD4
FAM118B
GOLPH3L
CCL26
SEC22B
ITGB8
MAP2
CPSF4L
CLIP1
IGSF9
LIFR
GRIN3A
H4C9
ILF2
RBP1
KXD1
MMRN1
YWHAG
APH1A
ZBED5
PRKRIP1
CD300LB
PPP1R15A
MEGF9
GPBP1
BTG1
RNF44
RND1
QPRT
FOXN3
CHMP4B
CPA5
ZNF593
C1orf232
PRTFDC1
LYSMD3
GGH
RBPJ
NR2F1
NEK2
CCDC172
BPNT2
NLGN1
SAPCD2
SLC4A2
CDK5
XPC
LSM3
ENOX2
RGSL1
ANKRD6
PLEKHG2
ZBTB20
ST7
SLC3A2
ZSCAN12
OR13C2
FEM1A
LDAH
CLPB
RAB5C
ZNF85
CDK5RAP2
HNRNPL
STAU2
HIP1
GRAMD2B
ADD2
LMAN2L
ZHX3
VCPKMT
PTPRZ1
SPTBN1
ZNF576
TTC39B
IRGQ
FNBP1L
UBE2T
APPL2
ZNF8
BSDC1
CCDC171
SUFU
MCTS1
SEPTIN9
ZIK1
CDK16
FAM102A
DDX20
DCLRE1C
PTPRD
NTMT1
ZNF273
FMNL3
CHD9
WTAP
SOD2
ZNF277
DOCK4
BMPR2
RIPOR3
CABYR
NODAL
OXNAD1
DSE
DPH3
ABLIM1
METTL9
ZSCAN18
SMC3
EIF3F
CIAO2A
ZNF548
TBC1D9
TSPYL4
EID3
NCLN
INSYN2B
ZBTB38
NDUFS7
LRRC23
ING4
DYRK1B
SCNN1A
MMP11
CA8
SLC35G4
MAPK14
GNA12
ICE1
DOCK9
LGR6
DYNLL1
RAI14
DACH2
KBTBD2
AP3M2
EVI5L
IGDCC3
ZNF140
REEP6
PCSK4
TMEM220
CENPA
PRDM14
HLCS
SRPRA
C16orf78
GBF1
ACTR2
VMP1
PTRH2
CLIC1
NDE1
MYO1B
LMO4
ANK3
NUBP1
FEZ2
DDA1
ZNF335
UFSP2
EFCAB8
MTHFD1
MEA1
CX3CL1
ZNF737
TOMM40L
INTS12
GSTCD
ERICH6B
ZNF668
WLS
CHD7
SLC7A11
DAOA
GCDH
ZNF286A
NSMCE4A
SPEM1
RRAGD
SEL1L
PTPRK
CBX1
WARS1
TMEM202
SLC25A25
GREB1
MCM10
TAGLN3