ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6750798 | MDA-MB-231
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◣ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
FAM227A
CBY1
MTF2
SPATC1L
CCDC200
PDE4DIP
CBWD5
CGRRF1
CYP4F11
CBWD3
CBWD6
EEF1A1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ZFAND3
C12orf29
NUDT4B
NUDT4
SOX2
PRDM4
PPIL1
HGC6.3
CXCL3
NUDCD1
TTC12
SPAG1
WDHD1
SOCS4
ELMOD2
ADGRB3
SAYSD1
NBPF1
SRPK1
GNPTAB
TMEM14B
BIRC2
MOCS1
EBAG9
KRCC1
TMEM217
TBC1D22B
PPARD
RBM19
TMEM71
PHF20L1
POLR2J3
C6orf89
EMC2
MSRB2
GPAM
MTMR2
RTRAF
LMBRD1
NBPF15
ATL1
STARD4
MAP4K5
FANCL
ZSCAN30
WASHC4
NUF2
ZNF322
MTCH1
PCMTD2
AARD
DENR
HCFC2
GLT8D2
TRPS1
TAP2
FBXO43
ARL14EP
TMEM260
DAB1
OMA1
MIER1
DNAI4
LYSMD3
ZNF330
SH3TC2
ZNF451
FANK1
DDX10
FANCE
SEC31A
THAP9
GPR89A
ZNF311
TMEM30A
ANKRD46
FDXACB1
C11orf1
PSMD6
ATG14
ZSCAN31
GAGE2A
SECISBP2
CDC7
TNFRSF11B
COLEC10
KIAA1586
MNAT1
MTHFD2L
CHST10
COMMD10
TCF7L2
SUPV3L1
TBC1D7-LOC100130357
TBC1D7
EXOC5
AP5M1
FILIP1L
GMNC
HLA-DRB1
TTC29
LYRM9
GALC
NOTCH2
CMTR1
UTP20
SLC35B3
SNRNP48
FRMD4B
PIK3CA
FAM200B
CNIH1
JRKL
CCDC82
ZC2HC1C
ACYP1
NRAS
ACYP2
SESN3
DHX35
ATG10
ZNF391
SCFD1
DDX1
KDM4D
CWC15
NAF1
PLEKHH2
STK38
SEC62
CR2
NAT10
ZNF202
DLG2
UTP23
TMEM126B
SMARCA5
EFHC1
LRRCC1
SERF1B
SERF1A
ZNF76
ARFGEF2
C12orf75
SIK2
ANKRD18B
SPATA7
KRTAP4-9
LRRC1
PCTP
LMCD1
HMGCS1
FDX1
PRMT2
NAPG
UBR2
FRA10AC1
TEX9
RPP30
GORAB
GLRA3
MMUT
CENPQ
KRTAP3-3
CTTNBP2NL
ZNF184
H2AC4
MFAP3
FAM114A2
SLC35C2
MRPL27
EME1
MAPK14
PAK1IP1
C6orf52
GFPT1
COMMD8
TRIM44
FBXL5
DPH5
SLC30A9
RPUSD4
FAM118B
HSD17B12
NEDD1
CCDC167
RNF38
C1orf53
RNF103
SMC6
GEN1
ZBED8
TAF4B
RLF
MTERF2
NIPSNAP3A
OSER1
CPQ
RNF19A
AFF1
CCDC88A
DNMT1
CD83
RABGGTB
RABEP1
PTGS2
OXR1
UBE2D1
GOSR2
PRKN
PACRG
WDR48
SCN11A
OXNAD1
DPH3
CRADD
FBXO48
APLF
FRMD6
HPS5
GTF2H1
ISOC1
NME6
RTKN2
SNX13
COPRS
ZFP69B
HACL1
BTD
TTC32
KIAA1109
ACTR5
MED20
BYSL
LSM6
ERMARD
GRPEL2
MLH3
VSTM5
USP53
PTP4A1
EXT1
MTREX
DHX29
PAQR3
DSN1
SCYL2
DEPDC4
KIF2A
PGBD2
ELAPOR2
PRRC1
TEX10
KCTD20
KIFAP3
PXT1
MAML2
GBE1
CCN3
GMNN
MAPRE2
STX7
CEP126
BAG2
CAST
MAPKAP1
OARD1
NFYA
ZSCAN16
CLASP2
PANX1
RBM7
C11orf71
IL15
PPP1R12A
SHPRH
FERMT2
UFL1
TP53RK
SGCB
BOD1
SNX2
NDST3
MOCS2
EEF1E1
SUPT3H
EXOSC9
MED23
GMFB
KRTAP2-3
METTL15
KIF18A
SRSF11
MINPP1
PTGFR
SARS1
SCLT1
C4orf33
RPE
MAST4
SRP9
SRBD1
SNRPB2
CENPC
KIF5B
H2BC17
H2AC17
CRY2
REXO2
RAB4A
ECI2
PRKCI
CEP120
SERINC3
FAM91A1
STK4
ACBD6
ZSCAN9
TCAIM
CHML
OPN3
STAMBP
GPSM2
TDP2
ACOT13
TOMM20L
UQCRFS1
CEP135
MYO1B
TMF1
CLK4
BMS1
DNAJC19
C6orf226
SNRPF
AP3B1
FZD6
NAA30
PPFIA4
KCTD8
DEPDC1
MRPL42
PHLDA1
L2HGDH
DMAC2L
EDEM2
PPP1R3D
FAM217B
ZCCHC4
TECPR2
CINP
P3H2
RPP21
FARSB
DEF6
DPY19L3
NOL10
OAZ2
CSNK2A1
C10orf88
MITF
SDHAF4
RNLS
ZPR1
GPR89B
STX17
AKIRIN1
TEFM
ANTXR2
LRRC37A3
FIP1L1
POFUT1
PLAGL2
BCL10
CCDC86
CC2D2B
PARVA
KCNN2
PACRGL
SC5D
SUCO
MKRN2
TMEM154
PIP4P2
UQCRB
BBS12
MTBP
MRPL13
CCNH
TTC17
SUCLG2
NDUFAF2
ERCC8
CHMP2B
ZNF691
BLOC1S1
ADGB
MAPK8
AMACR
CSRP2
MAPK1IP1L
IFT57
INO80C
SIPA1L1
C18orf21
VAMP3
CFAP58
RCBTB2
VPS54
PAG1
CEP295
GCH1
CDKL1
PDCD6IP
B4GALT5
MOCS3
DPM1
SYBU
SEL1L
VPS8
RFX3
H2AC11
H2BC11
SLC25A46
AMZ2
CDCA7L
PABPC4L
DCAF8
MFSD2A
ZNF35
MRPL2
KLC4
EIF2S1
ATP6V1D
TMTC3
CEP290
IQSEC3
MTOR
SLC25A27
CYP39A1
MYLIP
OGFRL1
RNF180
PAQR8
MCUR1
HTATIP2
METAP2
CRY1
FAM151B
TBC1D5
KRTAP9-2
CHD6
EXPH5
FOCAD
NCEH1
MMS22L
ZSCAN23
SS18
TTLL9
STX18
DPH6
TFAM
DCUN1D5
CLDN1
LRRC6
TWF1
NCSTN
COPA
CUL1
GXYLT2
FAM174A
FIGN
RAD21
USP49
RCHY1
LNPEP
MED30
RAB33B
ZNF829
ZNF568
DCK
CD302
KHDC1
MSANTD4
TNFAIP8
PRKAR1A
OTUD6B
FOXO3B
SPTLC1
NUP54
CAPZA1
BPHL
POLR1H
MRE11
ANKRD49
RALGAPB
PRPF38B
MED10
ST7L
IDI1
EPS15L1
WDR37
TESK2
GOLGA5
DISP1
NBAS
ANKS1B
DYNC2H1
UNC13B
FAM102B
KRTAP2-4
E2F6
ZFPM2
SVBP
ERMAP
NDUFV2
SCARB1
EFR3A
RAB28
LCORL
RPP14
HTD2
APPL2
DDHD1
DEK
C6orf118
ALKBH3
H2BC18
NAP1L1
TICAM2
MAL2
HMGCLL1
ANGEL1
CRBN
NFRKB
PRMT6
NEK11
ASTE1
HMGB1
DST
USPL1
PHF3
NCOA5
LRP12
INPP4B
ANTXR1
TTLL7
TMED8
SAMD15
MMAA
BTBD9
TMEM14A
TMEM263
PLPP1
POMP
GAGE7
GAGE5
GAGE4
GAGE2B
GAGE12I
E2F7
PELI1
KAT7
CCDC50
CCNG1
SH3GLB1
PNPLA8
PSMG2
CEP76
VRK2
OAZ3
THOC3
TRMT5
SLC38A6
UTS2B
PLRG1
TMEM45A
SLC25A4
SEC13
MAEL
ILDR2
ALMS1
PPWD1
CENPK
RASAL2
ZBTB18
NME7
BLZF1
PTPDC1
USP6NL
PPP1R42
MYL12B
DNAH6
RGL1
L3HYPDH
JKAMP
RBM12
CPNE1
LOC100287896
LIPT2
TIGD6
HMGXB3
CXCL2
PELI2
GABRB3
SPAG16
PTS
OXSM
NGLY1
GNG12
ZKSCAN8
RFX6
STPG2
VCPKMT
PAFAH2
ALG8
DPYD
FAM3C
ITPR1
NTAQ1
CHMP4C
ACADM
PHTF1
ATAD2B
ARG2
SMC5
ERBB2
NREP
RIC8B
ZNF124
PGAP3
SVOP
TIMM23B
PARG
SMAP2
RFESD
TCTN2
ERAP1
NPL
SAMD12
KIF6
DUSP12
RPL22L1
TTC4
SNRK
DR1
ATP5F1E
CDC73
TTC33
IFT81
TIMM10B
COQ2
TMX1
FBXO4
PIGF
CRIPT
ZSCAN26
COX10
MKLN1
EIF1B
CFAP43
ZNF133
BDP1
IQCH
AAGAB
NUP160
VPS37A
CNOT7
NUDCD2
HMMR
NBN
CNPY3
EIF2D
USP47
LONRF2
SAV1
ATP6V1C1
H2BC14
H2AC14
SLC41A2
ZNF491
CTNNB1
H2BC4
H2AC6
ASCC3
ZW10
RGP1
GBA2
PPME1
C2CD3
DGUOK
PPP1R21
ARL6
GLO1
SH3RF2
LRRC8B
ELMO2
AGBL3
GPATCH2L
UBA6
RAB35
CSE1L
VPS37B
SDC4
ARPC5
SNF8
RNF2
GNL2
ALDH2
MIA3
TDG
MYEF2
CTXN2
SELENOK
RWDD1
MSMO1
PRICKLE2
CMTR2
ANKRD17
UBXN2B
NEK4
CCDC15
UGGT2
RAD18
CTSC
MIPOL1
EPM2A
ROR1
CEP83
SMCO4
SMIM15
APTX
PCLO
DNAJA1
SNX7
PSMD9
HPD
JPT1
ANKRD50
SCAND1
COX18
ING3
NDUFAF4
KLHL32
EPB41
CHMP3
IKZF5
ACADSB
RNF141
ZNF596
MAK
LRRFIP2
NEK7
BOD1L1
RANBP17
EML5
NEGR1
EBPL
SNAPIN
KDM3A
MEA1
ARHGAP19
TNPO1
H3C1
ZNF587
C5orf51
HSF2
TMEM192
GCLM
CDK17
AP3S1
IL6ST
H4C1
UQCC2
ALDH18A1
TIGD4
ARFIP1
GEM
ADH5
SEC61G
ZNF134
LAYN
RFX1
GRAMD2B
SRSF6
PEX3
ADAT2
ZNF519
BIRC3
TP53BP2
MRFAP1L1
TXNDC16
PIGC
ZC3H12C
HSD17B7
SLC35D1
PI4K2B
PDHX
JHY
APIP
TEX2
ARFGEF3
MRRF
NCOR1
FOXN3
RUNX1T1
C12orf73
NUP93
SETMAR
KIAA0319
RGS2
PSMF1
ZCWPW2
AZI2
CPEB4
RBKS
BABAM2
ARMC4
DHRS4
SREK1
XKR9
LACTB2
TCTN1
PLD1
OSCP1
SPATA1
GNG5
TEP1
FAM120B
TRDMT1
GOLGB1
SCOC
TSPAN19
LRRIQ1
RBM41
SYNRG
ARRDC3
FAM13C
FBXO38
RBFOX2
TUBE1
FAM229B
CDCA4
DNAH14
ZNF562
TMED7-TICAM2
TMED7
BTF3
CNTN5
HDDC2
TOMM34
HTR7
NET1
CFL2
TDP1
EEA1
CABCOCO1
SMIM8
CTSO
CLOCK
SLC35G1
SAMHD1
TEAD1
ZNF112
GREM2
ATP10D
FNIP2
PRPF19
CBLB
RNF145
UBP1
CHUK
PPP1R10
MRPS18B
ALG9
METTL25
CCDC59
ZNF717
PLPP3
CPE
DIAPH1
FOXJ3
GOLGA1
OSBPL8
SNX5
MGME1
XPR1
TCP11L2
BROX
AIDA
KNTC1
TIAL1
INTS12
GSTCD
PCNX4
WDR41
PSMA5
NHLRC2
DCLRE1A
FER
HOMER1
KRTAP2-1
PRKAB1
AOPEP
BSN
HFM1
COL19A1
YWHAB
PELO
ITGA1
MPHOSPH6
RNF144B
RPL10A
UBL3
SUSD5
MACIR
GCNT1
NOL11
LRRC8C
BRD4
ZNF318
USP30
ZNF66
LAMA4
SP2
SELENOH
NRXN3
ZNF799
TRIQK
SUSD6
PGM1
MFSD14A
BMP2K
ZNF772
KTN1
ZSWIM7
TTC19
PTDSS1
MTERF3
SDHAF2
CPSF7
PLEKHA1
ZNF699
N6AMT1
POLB
NLGN1
RUFY1
PRKDC
MCM4
ACOX3
FANCF
PARPBP
NUP37
AARS2
FAM8A1
FBXW2
MGAT4A
IPO13
DAAM2
ZDHHC6
VTI1A
ZKSCAN4
H1-4
PACS1
NMT2
MARCHF4
TES
TBC1D31
RABGAP1L
E2F3
SLC36A4
SDE2
PPP1R11
H2BC13
H2AC13
SLC25A21
SLC44A1
POLN
HAUS3
TMED10
DNAJC9
SIAH1
ARHGEF12
TMEM39A