ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10407085 | KYSE-70
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◣ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NDUFB5
MRPL47
DNMBP
PHF5A
ACO2
FAM227A
CBY1
NRARP
HMGB1
FUZ
PXMP4
ZSCAN2
WDR74
GRK6
MCCC1
SLC25A36
DDX17
MTF2
CCT2
NOTCH1
C3orf20
OR13C2
PTMA
SPRY4
SIX2
FBXL19
CYTH2
NDUFS5
SPEF1
TYMSOS
TYMS
PDIA4
ANKRD65
PIK3R3
PIN4
SLC16A13
SINHCAF
HGS
ARL16
ISL2
UFD1
CDC45
TMUB2
DKK3
SAXO1
RRAGA
FOXO6
TESK2
ALDH3A1
GOLGB1
KLHL24
MFN1
ZNF775
ARID2
TDGF1
NEBL
PIK3CA
IQCH
AAGAB
H4C14
H4C15
PPP1R15A
KNTC1
METTL9
ARIH1
PIF1
ST6GAL1
IFRD1
ZFC3H1
THAP2
SH3GL3
TLX3
ANKHD1-EIF4EBP3
ANKHD1
ZBTB6
MOBP
VASH2
ESRRG
SNAPC3
CNKSR3
RRBP1
ZNF304
WBP11
C12orf60
F11R
SPAG4
PPME1
C2CD3
TOMM40
YLPM1
SRSF7
KMT2B
PIPOX
PSMB7
NKIRAS1
BLOC1S4
ADPGK
G3BP1
ETFB
GADD45A
OGA
SFPQ
PSMB6
FAM220A
H2AZ2
SDHD
PWWP2A
CCL26
DPP3
ZCCHC12
MYOF
CELSR3
SENP2
ANXA11
ABCC5
OAZ2
ELOVL5
RSF1
AAMDC
OGT
RASAL2
SLC25A11
RNF167
DDX5
STK32C
LRRC27
ABCG1
KRT6A
ZDHHC5
TIA1
PAX6
HACL1
BTD
TUBB
MCM7
AP4M1
KMT5A
ZNF680
HDAC9
WDFY2
RBM39
RAPGEF5
ZNF273
TAX1BP3
EMC6
LGALS8
ERGIC2
NDST1
YES1
ZSCAN9
CDK12
ANAPC15
CSRNP2
EMC9
GET3
EXOSC2
NME7
BLZF1
CHD6
PCNP
SLC33A1
MSANTD4
CEP63
ANAPC13
PIMREG
H3-3B
BBS7
GDF5
CEP250
PSME3IP1
RSPRY1
STAG3
GPC2
TBC1D31
TNRC18
RAB30
TOMM40L
RTN4
GTSE1
CAPRIN1
WASF1
CDC40
PTCD2
MRPS27
CALR3
C19orf44
UBQLN4
LAMTOR2
NONO
RBMX
ERV3-1-ZNF117
ERV3-1
HES5
DST
TUT1
SENP8
MYO9A
EP300
CEP70
ATP2C1
SIN3A
ARHGAP27
CGB1
FXR1
SHF
ATAT1
OARD1
NFYA
DMWD
SLC35E2A
ZCCHC8
HEBP2
VPS8
EMSY
SAPCD2
EPHB3
SPHK2
TCF4
NFX1
DHX8
NARF
ETV5
GOLGA6A
TRMT2A
RANBP1
TSNAXIP1
RANBP10
ANKRD54
ZNF627
SPRING1
RNFT2
UMAD1
TTF1
NUP160
TBC1D17
AKT1S1
WBP1L
ESRRA
MIDN
CDK5RAP2
CFL1
ETV6
SLC25A25
NAIF1
ARHGAP19
PFKM
VEZT
FGD6
COPS7A
IER5L
TIAL1
NDUFB4
DUSP6
TUBB4B
HEXIM2
EIF1AX
PSAP
PBLD
HNRNPH3
NCOA4
IGBP1
KDM2A
EIF2B5
CCDC116
RSPH14
CDC37L1
SBDS
REEP6
PCSK4
AKR1A1
TGIF1
PCBP2
RPS6KB2
TOP1
DNM2
HNRNPUL1
BAZ2A
KBTBD2
NTMT1
GPR137
TCIM
ANO6
MYCL
ADRM1
ACTR1A
GNA12
UBL7
RABL3
GTF2E1
ALKBH7
FZD2
CEP41
CCDC88A
IFTAP
RAB5C
WDR36
ITGB8
MTHFD1
PSMD3
SLX4IP
TRIM28
ZNF695
RNF26
C18orf32
PELATON
M6PR
KLRG1
PLCH1
ITGB1
UBE2T
NWD1
UBE2N
ANKZF1
IFRD2
DGLUCY
ENDOG
EGR3
POLR3E
TINAGL1
CHAF1A
FXR2
LRRC8A
KYAT1
TSPAN13
RAB11B
TRIM2
C15orf40
HIP1R
VGF
PPP6R1
SWI5
GOLGA2
RANBP3L
KRTAP3-1
AP3M2
COX7B
OSBPL1A
TTF2
YBX1
RABGAP1L
TMEM44
CD2BP2
IPO11
G3BP2
IREB2
HNRNPC
LRRC23
EIF3D
TMCC1
PELI1
UBR2
POLR2M
OTUD3
TCERG1
VIPAS39
AHSA1
MAP2K7
TMCO2
POLDIP3
CSNK2A1
FTSJ1
ACTL6A
PICK1
TMEM52
POLR3C
RNF115
U2AF2
ZNF195
CTTNBP2NL
RAP1A
SLC2A4
RAB5B
ZNF624
ZNF92
GOLGA6B
NDE1
GPR108
FEM1A
SELENOF
HS2ST1
SYVN1
DDX3X
NASP
GCDH
MFAP5
ETV1
CEP170
SDCCAG8
KMT5C
ZNF8
ZNF24
RRAS
AP2M1
PLEKHG1
CCDC146
MCTS1
OXNAD1
DPH3
ZNF791
ZNF490
SVIL
PRRC2B
KIAA0895L
HSPA13
IP6K2
NEK2
PLA2G3
DIABLO
EDN1
SOX6
ZNF428
C11orf58
TRIOBP
NUDCD2
HMMR
GPR158
SENP3
CNPY2
BUB1B
KCNAB2
TMEM41B
UQCRQ
GDF9
COX8A
DYRK1B
DYNLL1
RBM22
SLC20A2
KIFBP
TMEM143
SYNGR4
EXPH5
OTUD5
LDHA
SMPD3
MRPS30
PQBP1
TIMM17B
NEMP1
COL17A1
CTH
SLC4A2
CDK5
SLC3A2
CDK16
TCOF1
TCF3
SCOC
SLC25A45
CD109
HSPH1
EVI5
TPGS1
PPM1B
TSPAN31
MPP7
DYNLT3
SIRT4
MTA3
NR6A1
TBC1D10B
MYLPF
NFATC3
CLDN22
DACT3
ARF4
INTS9
HMBOX1
TMEM33
NCBP2AS2
NCBP2
LRRC45
CENPX
SYAP1
DDA1
ZNF513
TRIM29
ZNF286A
CALCRL
NFIA
MPDU1
LOC100996842
HNRNPAB
HSD17B12
TBCCD1
DNAJB11
DDX41
MORC3
ICAM4
LYRM7
SLC35B4
DKKL1
DNAL1
GRN
USP13
ACTR2
ZFP36L1
FANCC
ASPM
NOP53
DBNL
ZNF250
EVI5L
USF3
GSN
H2BC8
H2AC8
EPHB1
HECTD3
MAD2L1BP
GTPBP2
CBX1
ARL14EP
USO1
QTRT2
CCDC191
ABI1
RFWD3
PSKH1
MPND
USP1
EXOSC4
EFCAB12
MALSU1
DNAJB5
CLPP
RPL15
RFX1
CTXN3
LONP1
CATSPERD
EOLA2
PARS2
C20orf96
TPCN1
IQCD
DAAM1
STAT2
FBXO16
SPTY2D1
CFAP20
PAXBP1
IPO4
FBRS
LSM10
FAM32A
TIMM10
NPDC1
ZBTB17
ZNF384
XPO6
PHF14
LARS1
BUB3
ZNF408
ARHGAP1
LPIN2
HSPA5
SMC4
IFT80
RIOX1
SLC7A11
IVNS1ABP
TMEM59
TCEANC2
KRT8
H2AX
PLTP
GET4
VPS26C
U2SURP
RPS5
MMACHC
ZNF292
LSG1
AKIRIN2
CDR2
RNF7
POLR1F
TMX2
MED19
POU2F1
DNAJC16
CNOT3
ZNF500
STARD3NL
DDX50
PGM2L1
PLEKHG2
POLG
PCNX3
ZNF749
ACBD4
C12orf57
ZNF107
EEF1G
NATD1
SERINC3
UFC1
SMARCAD1
ZSCAN20
FAM126A
PIH1D1
SARNP
ORMDL2
HBP1
NDUFS7
NDUFS2
SELENOK
JAG1
NCLN
HINT2
TSTD2
NCBP1
FZD1
ZMAT2
NEURL4
SSBP1
CEP152
GHITM
PRMT1
ATG2A
COX14
AURKAIP1
SEC24C
DCAF15
NUDT19
NUCB1
CYCS
ETV4
AGPAT1
ARNT
RNF5
INTS7
DTL
MDM2
FOXP1
LMAN2L
ZNF687
MRFAP1L1
CMSS1
TNFAIP8
SBSPON
CCDC130
TOM1L2
DRC3
UTP23
SART1
TNFSF9
CEP20
HDGFL2
PPP2R1A
MIGA2
ODF2
MCM3
OSCAR
NDUFA3
ZNF443
PMM1
DUS3L
TTC16
PTRH1
GOLIM4
TLE4
ZBED5
DEDD
AP3D1
PARP6
ING4
HOGA1
DNM1L
PRCC
KDM4A
HNRNPA2B1
CBX3
ZFYVE1
ELL
TNRC6B
SSR4
IDH3G
ZNF764
MDC1
ST3GAL4
RALY
NSUN4
NRCAM
GSK3B
RUVBL2
GYS1
TBC1D23
PTBP1
ELP3
ECSIT
ZCCHC3
CDK1
PHKG2
REST
SACS
OTX2
METTL11B
NRG1
OBI1
PRICKLE1
SRRM4
SNRPN
FLAD1
PLPP2
MED12
HESX1
VENTX
NADK
PMEPA1
WFDC8
PSMD9
HPD
ZNF343
SNX16
FGD4
CER1
CELF3
DNMT3B
GADD45G
DAGLB
ADAM28
NANOG
FBP1
LIN28B
PPP1R16B
MTRNR2L2
RIF1
ESRP1
GIMAP5
FBXO40
CCDC169-SOHLH2
CCDC169
LRRTM3
SPIC
JPT1
PDPN
USP44
ITPRIP
ZNF532
PDCL
CDC14B
SLC2A14
FGFR2
MTRNR2L8
GPSM3
DHX32
GDF3
LRRTM4
BFSP1
TIMP4
SFRP2
RFX4
EEF1A1
TES
ADA2
TJP2
CARHSP1
SASH1
DUSP12
AK4
WDR49
AHCYL2
TBC1D16
UGT1A6
TNC
FAM120B
WNT5B
ACVR1
ANK2
MACROH2A1
VANGL2
CAMTA1
ALDH7A1
ST18
SLC7A5
AASDH
SGMS2
PITPNM2
AUH
RTBDN
VOPP1
KDM3A
KCNN2
KLF7
SLFN12
DPPA4
CCDC92
CCN2
GCNT2
STMN1
CFLAR
MARCKS
CDH10
PGK1
DISP3
BRINP2
KLF5
EPB41L1
CNGA1
DICER1
KCNIP4
F11
SYNCRIP
PALM2AKAP2
RGS3
TACC2
SLCO5A1
ACSL1
LINGO1
ZBTB45
POLB
MBOAT2
CD200
ZNF202
HMGN1
CTNND2
HOXB1
ERMN
C22orf39
LIN28A
PPP1R18
SMAD3
ARHGAP42
GEMIN7
LLGL1
DCLK1
CCL2
FAM153B
CAAP1
DET1
CNR2
TCHP
ARID5A
SLC10A2
RNF213
JUP
PLAGL1
SP5
MEF2C
SET
C1R
CHN2
ZFAND3
RAD54B
IFIT3
THEM4
DHRS3
SPATA12
CLCF1
LYPD1
CCDC167
YEATS2
IL17RD
PES1
TRDMT1
PCYT1B
NEDD9
AKIRIN1
LIMCH1
ZBTB40
E2F7
ZSWIM4
RNF19A
TRPM3
PCDHB8
MDK
AFF1
ZNF318
TMEFF1
ZBTB8OS
RBBP4
FAT1
ACCS
RGPD2
RGPD1
MANSC1
FAM181A
CNP
TRIM22
BORCS6
SMIM14
MOSPD3
TCN2
ABCB8
HNRNPDL
FSBP
RPL27
ENOPH1
HLTF
CNN3
GSPT2
PDE4D
TMEM114
IL23A
SYNPO2
ZNF37A
ZNF358
YWHAQ
CCDC200
RBBP6
LPCAT4
ZNF469
ADAR
SPAG9
PCDHB5
STOX2
DTNA
ADNP
GFM2
RNF43
ESR1
C1orf127
NFE2
DERA
TSGA10IP
CLEC9A
EXOC5
AP5M1
CPVL
AKAP9
FILIP1L
TRAK2
STRADB
LPP
SYTL2
ZNF106
ZNF763
AMOTL2
SLC2A11
INKA2
SLCO4C1
TNFRSF21
DLG2
MMP10
PDP1
SPHK1
TMPRSS7
DLX5
KLHL4
RASSF8
ZNF254
TFDP2
CDK5R1
CALD1
METTL7A
SYBU
ZNF649
GALNT8
RIMBP2
ABAT
MAP2K5
SMARCB1
PAIP2
GFRA1
PCDHB13
PER2
SUCLA2
PCDHGC4
GRHL2
DPPA2
PYDC5
MTRNR2L9
IFI16
PTGS1
EGFR
ZNF506
PKNOX2
SOX5
KLHL5
PRR5L
KLF17
RFFL
PROM1
RCOR1
RIMKLB
CCNG2
ATAD2
BCL9
TLE3
LCOR
ZNF608
AFAP1
INSM1
MAP3K9
ZCCHC14
PAG1
SNX27
KIF21A
ARHGEF37
CHD8
PDE4B
LOC389199
MRGPRX3
ID1
HEXIM1
ZBTB18
ERBB2