ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6750797 | MDA-MB-231
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◣ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
FAM227A
CBY1
SPATC1L
MTF2
TSPAN19
LRRIQ1
EEF1A1
TMEM217
TBC1D22B
RTRAF
CYP4F11
SDHAF4
HGC6.3
COX18
TMTC3
CEP290
ATP5F1E
TFB1M
WASHC4
NUDT4B
NUDT4
TICAM2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CBWD5
CBWD3
PPIL1
THOC3
UBR2
NBPF1
FAM120B
RBM7
C11orf71
SRBD1
EBAG9
PPARD
SOX2
ZSCAN9
KIFAP3
SNTB1
ZFAND3
CTBS
MTMR2
ZNF322
CBWD6
E2F7
RAB18
CNTN5
SLC36A4
PPP1R12A
SCFD1
MAST4
FRA10AC1
TMEM71
PHF20L1
C6orf89
MOCS1
CMTR1
UTP23
PARPBP
NUP37
GORAB
RNLS
CHMP3
USP49
DYNC2H1
HMGN3
PHACTR2
PRKG2
MTRR
FASTKD3
E2F6
TES
SNRPB2
PDE4DIP
ZNF518A
LRRCC1
HFM1
PDGFD
DLST
OR1F12
FILIP1L
TMEM14B
MAPK1IP1L
MBIP
ME3
POLR2J3
BPHL
COL19A1
WDR35
PAG1
CEP126
SH3TC2
JRKL
CCDC82
BAG2
AARS2
HDDC2
STARD4
COMMD8
OARD1
NFYA
DPYD
TDP2
ACOT13
TMED8
SAMD15
RBBP8
LMBRD1
NOTCH2
EXOG
ZHX3
TMEM260
GPAM
WDHD1
SOCS4
FANK1
C2orf73
TIMM23B
PARG
TDRD7
ZNF451
DYNLRB2
METTL25
CCDC59
HLA-DRB1
UTP20
GLRA3
CD83
HEATR5B
GPATCH11
SSH2
EFCAB5
SRPK1
BTBD9
FZD6
PELO
ITGA1
SMIM14
MYL12A
NBN
ZNF330
PHLDA1
HLA-A
PTCD2
MRPS27
ANKRD36B
DYNC2I1
EFHC1
CXCL2
RIOK1
CAGE1
EIF2AK3
ZNF76
INTS7
DTL
CGRRF1
MRE11
ANKRD49
TOMM34
LAMC2
CAP2
POLN
HAUS3
TNFRSF11B
COLEC10
SAYSD1
DR1
HPS5
GTF2H1
SLC44A3
ARL14EP
RAD21
COQ2
CCDC34
MCL1
SRP9
CTNNB1
KRTAP2-4
VRK2
PIK3R1
CCDC15
HTR7
PGBD1
ZC2HC1C
ACYP1
RNF150
HDGFL1
IP6K2
MRPS18A
CAST
TP53RK
PIGC
LYPLAL1
RAD51AP2
KRTAP4-3
CEP55
SESN3
DDX10
PIP4P2
TAF7
TIMM23
DPH6
TMX1
NUP133
ACTR8
ABCD3
SEL1L
NOL8
CENPP
ATG14
FER
RALGAPB
PELI2
PRELID3B
DEDD
MAP3K13
DDX60
UBE2N
DSCC1
WBP1L
TUT7
PTPRK
EHBP1
ZNF583
YTHDC2
MSANTD4
ZNF326
FBXO34
SCO1
ADPRM
ZNF337
RFESD
FBXO4
TBCA
ZNF557
ARHGAP24
RIC8B
CCDC50
FAM122A
MTCH1
EIF5A2
LSM6
MOCS2
UTS2B
STIMATE-MUSTN1
STIMATE
OXNAD1
DPH3
CD55
KIAA1586
CXCL3
DNAJC9
DAAM2
CFAP299
ETAA1
SYS1
SECISBP2L
L3HYPDH
JKAMP
KRCC1
ARG2
FAM135A
ZBTB40
ZSCAN16
TCAIM
LRRC37A3
CNTRL
C1orf53
PAQR3
EDEM2
ZC3H12C
MPHOSPH6
CARMIL1
ADRB2
C5
ZNF438
TRIM68
BANK1
ADGRB3
WIPI1
RBM19
SLC25A3
FAM76B
CEP57
PDXDC1
SCAND1
RBM12
CPNE1
SPATA4
UTP15
ANKRA2
ZNF397
C4orf3
NUF2
LSM4
RGS2
ERO1A
NAALAD2
NIPSNAP3A
PTGS2
CFAP58
PRPF38B
GABRB3
NET1
FOXP1
SMC3
TDG
APC
CCDC66
ECT2
SLC25A32
DCAF13
PRICKLE2
GNPTAB
IMMP1L
ELP4
ERMARD
HSD17B7
SNAPC1
CA2
ZSCAN31
APPL2
WDPCP
MDH1
FDXACB1
C11orf1
MTHFD2L
GCH1
RGL1
GRPEL2
EEF1E1
NT5E
POLE4
SUMF2
AKIRIN1
GSTA4
MANBAL
SMG5
C5orf51
CETN3
TTC12
ANKRD36C
FANCE
TOMM20L
NDFIP1
SPTLC2
ARIH1
VEZT
FGD6
SLC3A2
SELENOK
WDR77
ATP5PB
IL6ST
RNF8
CPOX
CCDC6
CLGN
NELFCD
SECISBP2
USP6NL
DENR
IFT57
BBS10
LONRF2
DTNB
ZNF333
ERO1B
BRAP
ACAD10
SYNE2
MAP9
DGUOK
ACTA2
XRCC4
TMEM167A
TEX10
RALGAPA2
SLC35B3
ISOC1
MAL2
MND1
UROS
BCCIP
MED13L
CDC5L
OXR1
FAM204A
CEP120
TBC1D19
MCM3
SH3RF2
SAV1
EREG
ACAT1
LIMA1
PTP4A1
H2AC15
H2BC15
CSRP2
CREBZF
KCTD20
MFAP3
FAM114A2
NEDD1
PXT1
ZNF25
RAD54B
TNFRSF21
ARHGAP19
CSDE1
CLIP4
CEP295
METTL15
KIF18A
FAM8A1
SLC17A5
MSRB2
FDX1
MYLIP
ZFPM2
CXCL1
PDRG1
EFCAB13
ZNF215
TFIP11
KDM3A
RFX1
MED17
LUZP1
HMGCS1
CLTC
CUL5
TMED7-TICAM2
TMED7
ANKRD46
RABGGTB
MAPKAP1
PIGF
CRIPT
STAC
PRKD3
TTI1
RPRD1B
ZNF302
CHD6
SDE2
GNPNAT1
EXT1
KIF3B
AARD
RAB33B
H2BC4
H2AC6
UGGT2
ZNF772
SAMD13
RTCA
RASGRF2
DERA
PACRGL
NME7
BLZF1
CDC7
ACOX3
HELB
SEMA3C
RPP30
SERINC3
C6orf226
ARL4A
CCDC39
RPF1
MAD2L1
RABEP1
CPE
BIRC2
HYDIN
TTC29
CCNH
EIF3C
C5orf63
REV1
SMIM12
C12orf66
MTPN
LUZP6
EIF3CL
PTMA
TNC
RPL5
GMFB
FBXO43
TBC1D7-LOC100130357
TBC1D7
MAML2
LPCAT3
ATP6V1C1
CHIC2
SPATA17
GPATCH2
ATOH7
MTX2
AUH
TNPO1
CLASP2
STK38
ZBTB17
ZNFX1
PCNX4
TMEM242
OTUD7B
EDEM3
MRPL33
ANXA4
AAK1
CDK17
NME6
CFL2
CRYBG3
NBAS
ISCA1
HSP90AB1
KLHDC9
CTR9
ARL6
CLDND1
PIGM
CHRM3
TAF9
RAD17
AK6
MALT1
RAB32
CR1L
ATP6V0A1
ZNF543
RBBP9
DNAJC25-GNG10
DNAJC25
H3C1
VPS8
PPIP5K2
MYEF2
CTXN2
HEATR5A
CDC42BPA
SUCLG1
C4orf19
UBE3B
KCTD10
MOV10
UQCRFS1
H4C1
ARMC4
TMEM17
RIPK2
PPFIA2
TANC2
TAP1
PSMB9
RNF19A
GXYLT2
MED20
BYSL
PTTG1
ANAPC10
ABCE1
ARFGEF2
RBMXL1
KYAT3
CHST10
UBA6
SLC35D1
RAB23
ENDOD1
CTNNBL1
PRICKLE4
NT5DC3
FRS3
TUT4
TMEM38B
PRR16
CHD1
RNF217
VAMP4
MRPL17
ILVBL
GLTP
TRPC4AP
WDR27
C6orf120
CCDC112
TSGA10
ERGIC3
MRFAP1
PDP1
GOLIM4
ALS2
SF1
FAM13C
SUCO
MTRF1L
ABCF1
CPD
PRPF39
EIF2AK2
COG6
ATRN
NCOA3
KNTC1
RPUSD4
FAM118B
LYSMD3
CYRIB
TTC13
ARV1
KAT7
ATL1
NCOA5
RFX3
BIRC3
SHOC2
VSNL1
SGPL1
BBIP1
MAP4K5
SMPDL3A
DERL1
VPS37C
MCOLN3
DYNLRB1
STK17B
NHLRC1
LPAR1
TMEM229B
PLEKHH1
NAXE
KDM3B
DYNLL1
EXPH5
ZNF124
CACHD1
FANCF
PPP1CC
MSMO1
RNF182
FRMD6
CDC73
ETS1
TMEM170B
RDH14
CUL7
TTC17
STAMBPL1
C12orf45
SLC25A51
GRIA4
TNFAIP8
TMEM123
NSRP1
BTF3L4
RPIA
UNC13B
CHMP4C
GBE1
HARBI1
ATG13
OGFRL1
MRS2
PSTK
LGALS3
ATXN1
ANKRD31
TGDS
F13A1
PRDM2
STX12
DELE1
CENPE
C12orf29
FERMT2
SACM1L
SRSF11
FBXW2
TASOR2
HMGCLL1
ZNF596
UQCC2
NFYB
RBM17
YAP1
SEC24D
PAPSS1
SMAD5
EXOC2
NAA20
SLC8B1
MEF2C
TRDMT1
EXOC5
AP5M1
CCDC130
MRPS30
INTS12
GSTCD
ACYP2
PHF3
SFXN1
PRDM1
CRB1
YTHDC1
XRN2
GDAP1
NUCKS1
LOC100996750
KRTAP4-7
TTC14
SNRPF
VAMP3
H3C3
HSPA5
GMDS
SNX19
MMUT
CENPQ
LYRM4
FARS2
ENTPD7
CYB5R4
CCN3
CEP135
SUCLG2
SPIN4
ASCC3
MAK
THUMPD2
PAWR
ATP6V1G1
CFAP70
TRIM32
ASTN2
ACSS3
AGL
COL8A1
RASSF6
LRRK2
LOC441155
MICU2
ZNF266
HECTD1
SHQ1
AKT3
TSHR
VWDE
PLCXD3
AGBL4
PPME1
C2CD3
BOD1
ELMOD2
TRIQK
ARHGAP5
RNF13
USP38
POFUT1
PLAGL2
ZNF32
ZNF700
FANCL
CSNK1G3
KIF5B
PPP1CB
NDUFAF2
ERCC8
SVBP
ERMAP
ZSCAN26
RAD18
C14orf28
STAM2
C7orf25
PPIC
ISCU
ZNF445
ROCK2
LSM11
ARF4
CCDC88A
NUDCD1
PEX3
ADAT2
TRPS1
TBC1D3L
TBC1D3K
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3F
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
RORB
H2BC17
H2AC17
ZCCHC4
CTSC
ZFYVE9
TM9SF3
TET2
IKBIP
APAF1
OR2L13
AK2
FAM149A
BMT2
DNMBP
CGGBP1
BRINP3
ZNF391
FAM83B
DNAH14
EIF2B2
PIH1D2
NKAPD1
SEC31A
RAB38
EIF2D
ZBTB12
DDX46
LAMTOR3
RNF180
LRRFIP2
DHRS4
TDP1
KTN1
UHMK1
ANKEF1
RAB11FIP2
ZNF654
WWP1
GPCPD1
PHF20
TAF11
DEPTOR
TMEM19
PTPN2
USP2
HNRNPUL1
COPS3
RERE
CLK4
PPP1R11
RWDD1
KRBA2
H2AC11
DDX1
SESN1
CEP57L1
TFAM
MIPOL1
CMTM6
GABRB1
ZDHHC13
RIOX2
NKIRAS1
RPL15
LDAH
DUSP6
CNIH1
ZNF706
CRY2
IKZF3
NDUFV2
NEK7
ZKSCAN4
SPCS3
HIF1A
DTWD2
SULT1B1
ILKAP
PCED1B
AMIGO2
ARHGEF37
WLS
SYNRG
CILK1
NUDCD2
HMMR
CHML
MYL12B
OPN3
PKN2
HECTD2
FBXO48
APLF
H2BC11
C18orf21
RIOK3
PRDM4
ZNF704
DENND1B
PAQR8
SCARB1
TRIM39
USP45
SSX2IP
MRPS5
MTCP1
CMC4
BRCC3
TIFA
TMEM251
MOAP1
BTBD3
NEMF
MAPRE2
TMX4
DNA2
RNF38
ANKRD18B
ZNF521
SLC36A1
MTERF2
POLR3B
RNF20
ZNF432
YWHAB
CCDC150
ZNF346
ATP1B1
FNIP1
SREK1
ZSWIM7
TTC19
THBS4
MTX3
ROBO2
IER5
FANCD2
SRSF9
ZNF343
C20orf96
HSP90B1
OSBP
CAV2
ACIN1
SIK2
C14orf119
PANX1
FNTB
DEK
LRP12
ATR
TTLL9
PTPN13
ZFAND4
ZNF136
TAP2
GCFC2
TSG101
OTUD1
MCUR1
MLLT10
XKR9
LACTB2
RNF144B
ARSJ
CCDC38
AMDHD1
INPP4A
ETV7
IFI27L1
DDX24
ZFP69
ADD1
CHPT1
THOC1
ZNF468
GTF2E2
ELOF1
NEDD9
SPATA7
TBC1D23
DIAPH3
DCAF10
DDX60L
PRKN
PACRG
GAGE2A
STXBP3
FAM91A1
ANGEL1
SGO1
CFAP251
ELOVL7