ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5716451 | Neural progenitor cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◣ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

GRK6
MTRNR2L2
MTRNR2L8
FOXO6
G3BP1
GET3
DACT3
EMSY
CYTH2
RBBP6
SLC25A11
RNF167
ZNF576
IRGQ
KIFBP
CCT2
OSBPL1A
FAM102A
SLC25A25
NAIF1
HGS
ARL16
SPHK2
ZBTB2
H3-3B
CLP1
SYAP1
ETV4
RFX4
DICER1
PLTP
ZSCAN18
HMGB1
IREB2
CTNND2
PIH1D1
PELI1
FAM227A
CBY1
WBP11
C12orf60
TESK2
NGDN
REEP6
PCSK4
MEA1
TMX2
MED19
TBRG4
HEXIM2
CEP41
CDK16
ETV1
MTF2
NF2
RSPH14
BSDC1
PTMA
CHMP7
PSMD3
CHN2
PPME1
C2CD3
EPHB3
MTRNR2L9
PFKM
HNRNPH1
YLPM1
HSPH1
H2AZ2
BTG1
CEP170
SDCCAG8
INTS9
HMBOX1
HNRNPL
TMUB2
NUP214
IPO11
PWWP2A
TPCN1
IQCD
TMBIM6
DCTN2
NRARP
TBC1D10B
MYLPF
DYNLL1
CCDC169-SOHLH2
CCDC169
SENP8
MYO9A
TRIM28
EGR3
NRL
DCAF11
CARM1
GTPBP1
TOMM40
TAX1BP3
EMC6
AP3M2
TXLNG
TRDMT1
ACTR1A
EHD4
PIK3R3
CDK12
SPEM1
MAD2L1BP
GTPBP2
UFSP2
TMEM143
SYNGR4
ABHD2
RNF26
DDA1
TMEM41B
TUT1
FXR2
ELL
SHBG
RGPD2
RGPD1
PTH2R
ZNF672
CTTNBP2NL
SPAG4
ACTR2
SENP2
HNRNPC
HES5
HACL1
BTD
ZNF286A
SAXO1
RRAGA
ZCWPW1
MEPCE
ETV5
DSE
TSPYL4
C1orf127
ARHGAP19
WDR81
DHX8
OGA
FAM181A
KMT5C
TENT5C
CNOT3
HDGFL2
MRPL45
ZNF775
ZCCHC8
TPGS1
PPP1R16B
RFX1
NUBP1
RBM23
ZDHHC5
SHC1
CKS1B
STAG3
GPC2
TCTN3
TEPSIN
NDUFAF8
DCAF15
PODNL1
PIN4
ZFC3H1
THAP2
ANKRD6
RFX2
ETFB
TOMM40L
VEZT
FGD6
HES6
LSM10
WBP1
ZSCAN20
ABCB4
RBM39
SLC25A44
PIF1
CDC5L
RNF169
TUBB
IFRD2
SPRY4
CHD6
MSANTD4
DMWD
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
GNA12
NEURL4
RPS13
NOTCH1
POLDIP3
NOL4
BMF
CCDC61
ZSCAN2
RAB5B
MPRIP
PC
NAA80
HYAL3
RRP9
PARP3
BANP
WDFY2
EMC9
CRISPLD1
PAIP2B
MICOS13
HSD11B1L
DNM2
TBC1D31
LRRC23
SELENOF
HS2ST1
FBXO46
JOSD2
KIAA0895L
GFRA1
EVI5L
GCDH
C12orf71
EPRS1
UVRAG
WDR49
SLC33A1
SMUG1
SESN2
RPS23
ATP6AP1L
TMEM256
XPC
LSM3
NUP62
IL4I1
ATF5
SP1
PPP2R1A
TCF4
DOHH
ZNF195
ZFYVE1
CLPB
KHDRBS1
TMEM91
B9D2
DUSP1
H2AC19
H2AC18
LRRC45
CENPX
CDC25A
FGD4
ZNF358
ZNF548
ASMTL
NEMP1
DDX17
CCN2
H2BC8
H2AC8
KBTBD6
VPS26C
ZBTB20
SEL1L
NDUFB5
MRPL47
MOSPD3
CLIP1
PRCC
NDUFS8
TAF13
MRPL24
HBP1
AGPAT1
RNF5
GGPS1
ARID4B
CDH2
KDM2A
ERGIC2
WDR59
MAFG
UBE2S
KNTC1
RPL27
PDP1
BLOC1S4
HIF1AN
JAG1
RPUSD4
FAM118B
SUFU
TRAPPC3
NDUFA5
TICRR
ELK1
HEXIM1
KHSRP
NSUN3
DHFR2
BABAM1
CELSR3
ILF3
SRRM1
HDAC9
IER5L
TAGLN3
TRIOBP
BRCA1
MPV17L2
FAM219A
DNAI1
TSNAXIP1
RANBP10
SPAST
TRMT1L
SWT1
ZNF823
EHBP1
SYMPK
NAA40
FOXA3
SINHCAF
CD2BP2
FAM185A
ATF4
TOR2A
TRAF7
SRF
CDK4
RAB5C
SLC35E2B
WBP1L
CFL1
LUC7L2
FMC1-LUC7L2
FMC1
SF1
PYCR3
NASP
MMRN1
TREX1
NNMT
NFATC2IP
MEGF8
EPC2
KIFC1
ITGB1
GID4
ATPAF2
NCLN
IQCG
ADAT1
RPL35A
SIX2
MMACHC
CCDC146
IFTAP
PIP4P1
SLC35B4
COPZ1
RBM15
PHF23
LPIN2
ZSWIM4
DNM1L
KBTBD3
AASDHPPT
BBS7
RPS11
DGLUCY
IP6K2
GHITM
CIC
PCF11
RPS6KA5
CCNT1
SMARCAL1
NUMB
UBXN4
H2AX
PHB2
UBE4B
ZNF653
LIN52
ALDH6A1
RPL29
ARIH1
PRKRIP1
ING4
RLF
ZNF547
TRAPPC2B
ELP5
CTDNEP1
SPC24
BFSP1
CAMTA1
IPO4
SPRING1
RNFT2
COX8A
GBF1
EXOSC5
BCKDHA
PRPF38A
ORC1
PPP1R35
SMARCAD1
CALR3
C19orf44
PPP1R15A
VGF
CNIH4
E2F1
PI4K2A
DTD2
KATNB1
TUBA1A
TMEM109
GNB2
PKNOX1
ZMAT2
ZBTB38
PANK2
C1orf189
ZNF189
MRPL50
ERCC6L2
EMC3
CDK5RAP3
TSPYL1
PDXP
POLRMT
GADD45A
SCOC
GOLGA5
MTCH2
USP1
TCERG1
DAD1
ESYT1
INTS4
FOS
FLAD1
ADAR
TRAK2
STRADB
MXD1
PHF12
PPP6R3
MTMR12
SAC3D1
UBQLN4
LAMTOR2
TLE3
UBR2
TENT5B
GADD45B
RND1
PTP4A1
EEF1AKNMT
STRADA
MAGI1
DISP3
CFAP20
CNN3
SMARCB1
SRP14
PUM3
BBS12
RAB8A
LMAN2L
MPND
PCNX3
WDR87
SIPA1L3
ZNF513
LARS1
HIBADH
MAP2K7
UBE2F
CDC6
RRBP1
PAIP2
PDE4B
ZFP36L1
ORAI3
POLR3H
SIDT2
ZSWIM1
FBXL19
ANK2
CDK5RAP2
EIF3F
VMP1
PTRH2
CX3CL1
WDR19
MECP2
KANSL1L
KMT5A
PCBP2
TCIM
SCHIP1
SNRPD2
QPCTL
ARFGAP2
FBXL12
TTF2
FRAT1
FANCC
OSBP
NUMA1
LRTOMT
PCM1
NUCB1
PGM2L1
KIF3C
PRPF19
ATG2A
RC3H2
DDX39A
DGUOK
PMM1
NAA35
LIN37
RPS26
E4F1
ERCC1
U2SURP
POLK
CERT1
MORF4L2
ZSWIM8
PGM1
PSMC4
PTBP1
CEMP1
ALK
NEBL
PCYT1B
TMEM114
GPBP1
MTRNR2L10
EFHC1
FUZ
SLC4A2
CDK5
SRPRA
DDX49
COPE
ZBTB5
ANKRD54
WBP2
PDK3
HSPA1B
DGAT1
EFCAB6
CUL3
TSPAN19
LRRIQ1
UBL7
TBC1D23
PGAP2
BUB3
CENPC
PGP
TSPAN17
HNRNPUL1
NR2F1
DUSP7
ABCA5
RPS24
CCNG1
RACGAP1
CAMK2D
EFR3B
WIPI1
RALGAPA2
C16orf91
C10orf120
ACTN4
SACS
LRRTM3
ZBTB37
ZNF138
TRAPPC6A
BLOC1S3
MRPL17
PPP4R3B
PPM1E
EGLN2
SASH1
BORCS6
RSF1
AAMDC
ABAT
FABP7
FOSB
GPR180
RNF10
ZNF417
EP300
ZNF254
ERICH6B
TCF7L2
DUSP6
USP30
ANKHD1-EIF4EBP3
ANKHD1
EIF4A1
DAZAP1
KBTBD7
GPR3
KDM4B
NARF
MRPL2
KLC4
TM9SF4
SDE2
YIF1A
WDR74
ITGB8
NBPF1
SCAF11
KIF27
FAM98A
BRD3OS
ZSCAN9
ANK3
LYRM7
SSR4
IDH3G
SLC39A9
ERH
FH
HP1BP3
AP3D1
EPB41
CCDC181
EFTUD2
CCDC103
PKD1
DPP3
MCM10
GPAT4
L3MBTL2
PPP1R21
DOT1L
XAB2
ZNF593
C1orf232
CIAO2A
DNAJC12
TUBB4B
DHX16
NPAT
ATM
C9orf85
ABHD17B
METTL16
ZNF862
CAPZA2
CHD8
ZSCAN31
SPTBN1
WDPCP
DNTTIP2
MDH1
TAB1
SNAPC3
ESRRA
NEDD9
TMEFF1
DTNA
ZNF140
VXN
ANKRD36
ABI2
DMXL1
USF3
WASHC3
HNRNPA1
CBX5
PARS2
ZBTB48
CXXC1
ADNP
ETFDH
C4orf46
ILF2
RBM22
STAU1
C2orf80
MAP3K13
ENSA
DDX27
ACTL6A
PSMC5
FTSJ3
AKTIP
SAP30BP
RECQL5
ZNF738
CREM
CTNNA1
PGLS
UBE2C
EPHB1
LRRTM2
STARD4
NATD1
KAZALD1
MFN2
RPUSD1
CHTF18
ZNF764
NBAS
P3H1
NME1
GPN3
FAM216A
CDCA4
STX12
SUCLG1
TMEM115
LYPLA1
FZD2
AKAP9
PEX11G
LDB1
FEM1A
MRPS14
TPRKB
COG3
ZNF416
NDUFAF5
ESF1
USP54
UPF3B
UBA52
PDIA4
CEP63
ANAPC13
MAPK14
COX7B
TNRC6B
RMND1
ARMT1
CACUL1
SMPD2
PPIL6
HNRNPR
ALG8
RFWD3
RPL9
LIAS
FZR1
EBNA1BP2
CFAP57
RPL21
ATG5
PCBP3
DPYSL5
UFD1
CDC45
CCDC130
INTS12
GSTCD
ANP32E
ZNF709
NUDT2
KIF24
BAG6
APOM
ZNF84
ARL13B
ISY1-RAB43
ISY1
SLX4
FICD
SPSB2
EIF3D
UBL5
RNF40
CCDC189
RFC2
TM2D2
ADAM9
SYNCRIP
PES1
MEGF9
ACYP2
PSME4
VTA1
NMBR
PMVK
SARNP
ORMDL2
FTSJ1
DENR
TMEM258
FEN1
JAM2
SPATA24
CHMP5
BAG1
GTF2H2
POLR2E
RBX1
ZNF304
ARF4
GDF5
CEP250
ZNF106
SAPCD2
TUBG1
RETREG3
YPEL1
IFI6
CNNM2
BSN
NAPA
WDR62
THAP8
SLC25A36
ADRM1
COPS7A
C17orf77
DDX10
FAM200B
PRRG2
NOSIP
TXNDC16
FARP2
UVSSA
FAM86B1
ALDH7A1
ST7
ZIK1
SALL4
CACYBP
SASS6
PNN
ALAD
TADA1
YPEL5
RWDD1
PRR14
XPO7
AVPI1
NABP2
HSPBP1
IPO9
WFDC8
ANAPC15
AFAP1
LOC389199
PIK3C2B
DCLRE1B
AP4B1
NUDCD3
LONP1
CATSPERD
PDAP1
BUD31
SPEF1
TIMM10
ING2
AP2S1
CREB3L2
C1orf21
EIF2S3
SMIM13
PSMD2
DNAAF3
SCLY
TIAL1
RBMX
CLIC1
LMO4
USPL1
PRMT5
PHB
NCL
TIMM10B
SETD3
CCNK
LMBR1L
THRAP3
MXD4
SRSF7
ZNF506
CEP128
PWP1
ZNF688
RRAS
CBX8
POLA1
DNAJB5
GGCT
TMEM170A
SFPQ
EIF1AX
MTUS1
CENPA
KNL1
CRADD
MRPS31
RPL23A
GRWD1
DNAJC21
ATP5F1B
SLC36A1
MBD4
IFT122
RNF20
LENG1
SARS2
MRPS12
PNRC1
FAM72D
FAM72C
ALS2
DRG2
SLC35A5
ATG3
RPIA
UTP3
FAM3C
SHOC2
ZNF782
DENND4A
BBIP1
GUK1
ZNF484
RHEBL1
MST1
PDPN
ITPRIP
ENOX2
HNRNPAB
ASF1A
ZWINT
ACTL6B
ACOX3
TRMT44
TMF1
SVOP
HNRNPD
SPDYE14
SPDYE10P
CASTOR2
ZNRF1
MTHFD2
RGR
SERTAD3
SMG7
CLIC4
SENP3
NSRP1
PSMA6
TCOF1
FAM76A
RNF7
MTOR
BDH2
SOCS3
FAM160A2
VPS4B
CDIPT
TMED4
ZNF474
MAT2B
FN1
PAK1IP1
C6orf52
SDR39U1
CCDC12
ZFAND4
FGGY
SCAF1
TRMT2A
RANBP1
ERMN