ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX20532165 | hESC HUES8
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◣ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
EEF1A1
SRRM4
DNMBP
PIPOX
OBI1
HMGB1
PRICKLE1
FAM227A
CBY1
NANOG
PTMA
MTF2
SNRPN
CDC14B
GIMAP5
SOX6
OTX2
SACS
NADK
DDX17
ZNF532
IER5L
RIF1
PLPP2
HDAC9
REST
C20orf96
FAM120B
SLC2A14
ZNF775
DPPA4
FAT1
WNT5B
CYTH2
AHCYL2
FBXO40
NDUFB5
MRPL47
PGK1
CER1
METTL11B
PSMD9
HPD
CARHSP1
ESRP1
TMEFF1
CDH10
GRK6
GADD45G
KIFBP
GCNT2
FGFR2
HESX1
HGS
ARL16
LIN28B
LINGO1
PCDHB5
TAL1
ZBTB45
AFF1
KCNN2
FBP1
NOTCH1
FGD4
FAM153B
ZFC3H1
THAP2
SINHCAF
FOXN3
GDF3
NRG1
MEX3D
PRDM14
ZNF202
SGMS2
KMT2B
SNAPC3
FUZ
CELF3
ETV4
LRRTM3
ESR1
PMEPA1
ADAM28
TES
DAGLB
LRRTM4
E2F7
ETV1
TUBB
ZNF304
TCHP
PDCL
ERBB2
CCDC169-SOHLH2
CCDC169
LIN28A
TACC2
RFX4
FBXL19
SLC25A36
F11
H3-3B
RAD54B
FSBP
TDGF1
STOX2
USP44
DMRT1
MARCKS
PPP1R16B
CDH9
ARHGAP42
SMIM14
PBX1
CCT2
ZFAND6
ANK2
UBQLN4
LAMTOR2
KNTC1
GET3
VASH2
SIX2
SMAD3
HSPA13
ATOH1
ZSCAN2
DDX3X
GPSM3
SLFN12
ZNF627
ARID2
TMEM41B
GID4
ATPAF2
CFAP20
SLCO5A1
SRSF7
HMGN1
AASDH
PER2
BRINP2
CD200
IL17RD
GRIN3A
ARIH1
SPRY4
SASH1
PDP1
AFAP1
LOC389199
PHF5A
ACO2
TBC1D16
ZSCAN10
THY1
TESK2
VGF
EP300
ADD2
IGDCC3
ARF4
RNF213
BORCS6
CHD6
ARHGEF19
CEP41
ADA2
PAG1
IP6K2
USP53
CAPRIN1
PDIA4
RRBP1
DISP3
ARID5A
CTTNBP2NL
TRMT2A
RANBP1
CSRNP2
RPL27
RTBDN
PIN4
ZNF140
IQCH
AAGAB
TIAL1
HES6
KLF7
ZNF428
PDPN
SLC16A13
ESRRA
WDFY2
AK4
HOXB1
HEBP2
ZNF506
UBE2T
ADRM1
TRAK2
STRADB
TJP2
ATAD2
DPPA2
PLCH1
EGR3
MIDN
ZNF195
DAAM1
TBC1D17
AKT1S1
C6orf132
ZSWIM4
HK2
MACROH2A1
IFRD1
SPAG4
SLC10A2
FLAD1
ISL2
RBP1
CFL1
TMUB2
SLC4A2
CDK5
SLX4IP
TSGA10IP
DHX32
FOXO6
TRIB1
MDK
SET
C1R
ZBTB6
C11orf58
PTX3
BCL9
TLE6
PLCG1
CCN2
AMOTL2
SH2D3C
ALDH7A1
CELSR3
LDB1
TOMM40
STK32C
LRRC27
TDRP
EMC9
HNRNPDL
ENOPH1
WBP11
C12orf60
FEM1A
GJC1
SUCLA2
CDH6
ZBTB37
EXOC5
AP5M1
ZNF101
ST18
PIMREG
SLC2A4
THBS2
DACT3
ST6GAL1
FOXP1
TUT1
EMSY
POLB
ZBTB8OS
RBBP4
ADNP
LZTS1
CD2BP2
PSMB7
FZD2
C1orf100
FZD10
CKB
WDR49
DDX59
H2AZ2
EPHA2
CCDC172
ZNF343
RASSF8
PSME3IP1
RSPRY1
IGSF9
TRPM3
INSM1
HECTD4
CALR3
C19orf44
DGLUCY
SMARCA2
AUH
VEZT
FGD6
CCDC200
STAG3
GPC2
NELFCD
SFRP2
RAB30
SFPQ
RGS3
SMARCAD1
THEM4
TMEM132A
PWWP2A
TRIM38
PPP2R1B
DNM1L
GADD45A
WASF1
CDC40
INKA2
PPME1
C2CD3
ACTR1A
ZNF763
HNRNPUL1
ZNF180
SUFU
KDM2A
GPBP1
ACVR1
CCDC92
ZNF358
DLX5
ZIK1
NKIRAS1
BBS7
RPL15
QPRT
VENTX
IPO11
PHOX2B
SYNCRIP
OAZ2
NARF
RUNX1T1
ZNF91
ELOVL5
ZIC1
KIAA0895L
LPIN1
MSANTD4
ETV6
HEXIM2
YEATS2
MMP11
PIF1
ZNF697
ZCCHC14
ANAPC15
ZDHHC5
PEX11G
KANSL1L
RBM23
HIP1
GOLGB1
INTS9
HMBOX1
UBR2
MPPE1
DST
SH3GL3
TMX2
MED19
RBBP6
PTPN9
PPP1R18
MMACHC
KIF3C
E2F1
DPP3
ZNF250
MEIG1
ACTL6B
GALNT8
WBP1L
ADGRA1
XAB2
ITGB1
SFXN1
OR51H1
VANGL2
CDK5R1
SLC33A1
ACSL1
CHMP4B
PTP4A1
LGR6
PTPRK
CTIF
RAB5C
HBP1
BAZ2A
CD300LB
FBXO46
SMARCB1
SCOC
EGFR
SYNPO2
PGM2L1
PYDC5
IFI16
SPAST
DIAPH3
TNRC18
ZSCAN9
OGA
TSNAXIP1
RANBP10
STAU2
ZNF8
TIMP4
CTH
MOSPD3
DLG2
CITED2
SCD
ZNF106
MAPK14
DDAH2
PODXL
TLX3
RBM39
TCF4
XPC
LSM3
RBM47
PACSIN3
TNFRSF21
DNAH2
RASSF10
PIK3R3
GHITM
MB21D2
PRKRIP1
NCL
KDM3A
CEP170
SDCCAG8
ZNF37A
SCNN1A
LTBR
CAMTA1
GSPT2
UQCRQ
GDF9
TBC1D10B
MYLPF
EHD4
AVEN
SHROOM3
SPRING1
RNFT2
TCF7L2
G3BP1
GNA12
FBRS
SNX15
TLE3
TUT7
INSYN2B
ZFHX2
GJA1
H2AX
SESN2
NOTCH3
CCDC12
PTGFRN
NDUFS8
ZBTB26
KXD1
PPP1R15A
CABYR
LRRC8A
KYAT1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
UFD1
CDC45
DYNLL1
HAS3
FBXO11
ESYT1
TRAF7
JPT1
ZNF268
ZNF576
IRGQ
L3MBTL4
CCL2
ZNF43
ANKRD9
ZBTB40
ATAT1
YWHAQ
PTCD2
MRPS27
COX8A
USP37
CNOT9
E2F3
SERPINH1
DHX8
SPHK2
PHLDB2
JADE1
CPVL
RSF1
AAMDC
REEP6
PCSK4
PIM1
RBMS2
LPAR6
PES1
TCN2
ZNF469
ACTR2
DUSP7
TFAP2A
OCLN
DCLK1
VPS50
HEPACAM2
ASMTL
RASSF2
LLGL1
PDCD2
CBX2
CLIP2
DHRS3
TMEM33
ZNF738
EID3
CCDC124
KATNAL2
WDR59
CCDC88A
SMC4
IFT80
HNRNPAB
VRTN
ZNF608
RAB4B
ZNF589
BAMBI
SBK1
YIPF3
POLR1C
C9orf72
OIP5
NUSAP1
SYTL2
G3BP2
SDHD
RAD23B
ZWINT
AGO2
FZD7
PXMP4
HIP1R
C2CD5
PLA2G3
IZUMO1
TUBG1
RETREG3
MED12
ZCCHC12
FILIP1L
CDR2
NCOA4
TCERG1
SPRED3
NELL2
NDUFS5
IFIT3
UMAD1
LMNA
KIAA0754
AKIRIN2
MEX3A
CCDC146
SRP14
CDK5RAP2
WDR33
TBC1D9
DNAJC16
SPINDOC
EEF1G
REC8
MYT1L
TTF2
HNRNPL
ZNF749
SWI5
GOLGA2
KCNIP4
CNN3
ID1
NEK2
SNX27
MPRIP
TP53I3
RBM4B
SESN3
DUSP10
SLC3A2
OXNAD1
DPH3
KMT5A
LRRC23
ZNF737
ZNF708
MRPL2
KLC4
DIXDC1
TBC1D31
ZNF197
CNOT3
SLC35E2A
TBXT
ELF3
NUP160
P3H1
MYO1B
CPSF4L
PPP1R10
MRPS18B
GOLGA5
MMD
CCDC71L
CCDC167
SAPCD2
GBF1
HELLS
CDC25B
TRIM22
CDK12
ZCCHC8
VCPKMT
ZNF548
ICE1
CRADD
GNAL
LPCAT4
ARID1B
YPEL1
DKKL1
THRA
SLC25A11
RNF167
TSPAN13
MEA1
OXA1L
PIAS2
ABHD16A
TMEM52
ZNF3
ING4
NRL
DCAF11
KDELR2
ESR2
SEC22C
SS18L2
ARL4D
TRA2B
PSD
FBXL15
ASIC2
ZFP36L1
PHB
DUSP12
H4C14
HLTF
H4C15
KBTBD2
GPRC6A
METTL7A
H4C9
H2BC8
H2AC8
TDG
RNF157
ZNF606
ZNF135
CCNG2
GTF2H4
NR2F1
ZNF85
MIA3
FNDC11
PITPNM2
CHD8
SEL1L
AKR1A1
CARM1
SLC44A2
WDR36
RASAL2
AP3M2
EFCAB8
STRADA
RNF26
ERGIC2
PQBP1
TIMM17B
CDK16
STRA6
TRIM28
PRPF19
ACSBG1
CDKL5
MYH2
TRAPPC6A
BLOC1S3
KCNQ3
TOX2
GSN
ITPRIP
MRPS30
GOLPH3L
NODAL
ACYP2
ZNF677
PSME4
KLK13
ZMAT2
KDM1A
ZNF253
ADO
COPB1
LUZP1
CCDC14
LARGE2
PRPF38A
ORC1
NUP62
IL4I1
ATF5
WDR19
ZNF71
LYRM1
MYADM
DCUN1D3
CCDC130
PBLD
HNRNPH3
STIP1
FREM2
UTRN
OSR2
GEMIN7
TAX1BP3
EMC6
CDK13
MCCC1
ZNF273
PSKH2
BFAR
KLHL24
MEGF9
RBM22
N4BP2L2
USP1
TUBB4B
SRPRA
VPS37A
CNOT7
HSD17B12
CCND1
NPAT
ATM
RAD51AP1
C12orf4
NUBP1
ING2
OLFM2
SAT1
KIF15
KIAA1143
RFPL3
VOPP1
CLPB
BAZ1B
TMEM44
AP3D1
GCDH
ZNF493
PTGES2
SMG9
GFM2
RAB34
KIFC3
TCTN3
ZNF670
CCDC152
ACAA1
WDR74
ZNF747
ARSD
ABHD2
TP53BP1
MYCN
CIAO2A
HNRNPA0
EFNA4
MAPKBP1
BTG1
CAMKV
WDPCP
MDH1
ZNF513
GUCY1B1
ACIN1
SENP3
C14orf119
TMEM249
MAP3K9
TPCN1
IQCD
ZBTB8B
KLHDC7A
GDF5
CEP250
DDX5
MXD1
ZNF720
ADAMTS10
TP53BP2
NEUROD1
OLIG2
EIF3F
ZNF672
EXOC1
DESI2
POU2F1
RPUSD4
FAM118B
UQCRC1
RIC8B
CBR4
CACNB3
SLC16A1
PELI1
CALD1
BMF
TIMM10
SND1
PRR14
LIN9
OARD1
NFYA
RIMBP2
PNRC1
EVI5L
RPA2
PHC2
KIF14
INSIG2
FOXH1
TLL2
CDC14A
UBC
PDE4D
NOL4
SMUG1
ANKHD1-EIF4EBP3
ANKHD1
ZNF430
EDIL3
ZFAND3
PUM1
KLHL5
COPS7A
PCM1
NEUROG1
DHPS
JAG1
DCLRE1C
EXOSC5
BCKDHA
PCBP2
ZBED5
METTL9
DKK1
PJA2
KRTAP13-3
TIA1
FXR2
HNRNPR
SHBG
RPS6KA5
PRCC
ADAMTSL1
TPD52
FBXO47
HNRNPC
FGF19
RPS11
BTRC
PSMC3
BMPR2
COX20
ZNF214
NLRP14
JAK1
HNRNPA1
CBX5
TMCC1
RBBP9
NIN
FN1
C1GALT1
SPRY2
DDOST
C22orf39
PPP1R12C
SDK1
YLPM1
CDC7
SKA2
PRR11
CD109
FOSL1
MAD2L1BP
GTPBP2
UCHL5
RO60
KLHL26
ZNF107
CNGA1
GSK3A
DUSP23
DNAJC4
ELL
RAB5A
EFHB
PLEKHG4B
LYRM7
SERTAD3
RIPOR3
TENT5C
NUMA1
LRTOMT
XRCC4
TMEM167A
SMPD3
MANF
NEDD9
DDX20
FEZ2
TOM1L2
DRC3
OS9
IFRD2
ZNF528
ANKZF1
ZNF789
LYPD1
ZFP62
MN1
TSEN34
MBOAT7
FDFT1
ACCS
ATP5MC1
MYO9B
HAUS8
GOLGA6L10
STAT2
EDRF1
ZNF624
STX6
LCK
SP8
TRAF4
STMN1
CTNND2
RPS6KA2