ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3205373 | Head and neck squamous cell carcinoma
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◣ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MTF2
NRARP
IQCH
AAGAB
VANGL2
RCOR1
TRMT2A
RANBP1
CCDC88A
FZD1
INTS12
GSTCD
SLC33A1
NOTCH1
SNX16
WDR74
MLEC
WDFY2
GFM2
ADAM28
TNRC18
ATXN7L2
PTMA
ZBTB40
KDM3A
ARID2
TJP2
PEX3
ADAT2
POLB
GBA
NACC1
NDUFB5
MRPL47
WDR36
HEXIM1
IPO4
KLF7
CEP63
ANAPC13
ZFAND3
OGA
TUT1
MRPS14
CFAP20
STAU2
ZNF335
PGK1
ZSCAN2
PTCHD4
F11R
SYNCRIP
RASAL2
MTRNR2L8
HSPH1
PPDPF
RTRAF
ASF1A
TSC1
GFI1B
MRPL48
TMCC1
FAM168A
CCDC152
PIK3CA
ACOT1
HSPA4L
HMGB1
TUT7
USPL1
FAM227A
CBY1
CYTH2
ZNF195
HEBP2
ZNF37A
LGR6
MRPL44
H4C12
NDST1
FNBP1L
SECISBP2
FRA10AC1
GSN
LSG1
SSBP1
ARIH1
YLPM1
DDX17
MTRNR2L2
KMT2A
NOXA1
SLITRK3
FGF19
GABPB1
PAXBP1
ANKRD65
BZW2
ANKMY2
CAPRIN1
ZBTB6
CHD8
PTPRK
IL23A
CCDC200
OGT
FMNL3
MED23
ITGB1
JUP
KDM2A
ZNF440
ZNF426
MRPL3
AP4E1
LY6G6D
GOLM2
DKK1
CLPB
GRK6
ANXA11
SKIL
NREP
GBP6
UBTD2
CFL1
ANAPC15
PHF5A
ACO2
BMS1
ITPRIP
RMND1
ARMT1
PPP1R18
DKK3
DSTYK
C17orf75
EIF4A2
MSANTD4
WTAP
SOD2
INSM1
KMT5B
PGBD2
MRPL21
IGHMBP2
TMEM132A
TMPRSS4
FSCN1
STMN1
SPIN1
RAPGEF5
USP30
ADRM1
CHD6
PAFAH2
CLTC
POLR3E
SLC29A3
DUSP6
LMX1B
ESRP1
GPR137
PRKCI
DGLUCY
EDN1
SLCO1B3
H4C14
EIF3F
GALK2
COPS2
CEP41
ID1
RBBP5
AAR2
TMEM242
TMEM41A
EMC9
ZNF524
FIZ1
RPL27
SLC25A45
H4C11
TRAK2
STRADB
PPIP5K2
COX16
SUGCT
MPLKIP
MNAT1
TRDMT1
SPHK1
SINHCAF
B4GAT1
NCOA7
PTGES2
MUS81
MCCC1
ZNF106
STX16
TES
KNL1
CAV2
MRPS31
ALDH7A1
SHF
PHIP
NUF2
FBXL19
NFIX
COL17A1
POLG
ZNF791
ZNF490
NUP160
ADAR
SLC44A1
GPSM3
CSRNP2
NSUN6
ARL5B
ZNF408
ARHGAP1
SLC35A3
SPATA12
ZBED5
GAS1
NDUFS3
KBTBD4
TMEM101
YEATS2
NPIPB4
YWHAQ
MTDH
SRPRA
YDJC
ZSCAN9
TRMT1
GCDH
ABCA13
MARCKS
ZBTB8OS
RBBP4
HEXIM2
EXOC5
AP5M1
ATAD2
CACYBP
UBE2B
CDKL3
NFKB1
C15orf62
UBB
MRPL42
H4C15
NPIPB8
SPRED1
TEFM
GTF2H4
VTA1
NMBR
GTF3C5
PLPP2
RBM39
ARMCX5-GPRASP2
ARL2BP
ARMCX5
PPP1CC
TBC1D13
TBPL1
COMMD2
MAPK6
RTTN
NASP
FAM220A
LNX1
GTF2H2
EIF3E
TCF12
ZNF627
LTBP1
CHMP4B
DNTTIP2
SMUG1
C11orf49
MAP3K9
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NCBP2AS2
NCBP2
ANKRD40
C2orf42
DISP3
PIMREG
SMARCE1
ASXL1
SELENOH
MAPRE2
PRKDC
MCM4
NPIPB12
PSMB7
USE1
ANKRD22
CCT2
HMGN1
RTN4
UBE2F
LPP
PTX3
NTMT1
SRSF6
DRG2
NR6A1
NPAS4
PHF21A
SLC24A1
NDUFS5
WDPCP
MDH1
GTPBP3
ANO8
CALM2
PNRC1
ZBTB26
BCAR3
GTF2H2C_2
GTF2H2C
MEGF9
GLIPR1L2
STK35
KAT6A
PALD1
KLHL24
RCOR2
FAM227B
DTWD1
ALG10
ETV4
CLCF1
PAIP2
UFD1
CDC45
COPS7B
ZER1
RUVBL1
TRUB2
COQ4
EGFR
EXOSC2
SSBP2
PCNP
SFT2D2
ESRRA
SNAI2
H3-3B
RBL1
POR
PPP5D1
CALM3
LOC100129484
SMARCB1
SLC3A2
POLR2M
ACOT2
CCNL1
POLDIP3
CCNG2
GOLIM4
C16orf46
ZMPSTE24
RABGAP1L
CD55
GARS1
BRF2
WDR24
IFRD1
RAPGEFL1
FAM98B
HNRNPDL
TSNAXIP1
RANBP10
ENOPH1
NME1
TRIP4
PIH1D2
NKAPD1
CHST15
TMEM41B
NELFCD
ZNF391
DMAP1
OAZ2
UQCRQ
GDF9
ARL14EP
AGO1
AADAC
NPIPB5
RPS7
DLX5
GADD45GIP1
TCF7L2
PSMD3
SPRY4
EDARADD
MAP4K4
LRRC37A3
NHLRC2
DCLRE1A
PDIA4
AQR
FCHSD2
CREM
BRWD1
SYT1
HR
CDK5R1
FOSB
KLF12
HSPE1-MOB4
HSPE1
HSPD1
UBASH3B
IQSEC3
PLEKHO1
NAB1
ERAP2
ZDHHC5
TPR
ODR4
NFE2L2
RAD23A
NPIPB11
CTNNB1
CSTF2T
MEIG1
ALS2
ZNF443
ZNF326
GATA6
STK32C
LRRC27
IREB2
SLC35E2A
USP6NL
EIF1AD
BANF1
RAB18
MRPL16
PRMT5
ZNF76
USP14
KMT2B
GET3
FXR1
ZNF561
TMSB10
BACH2
PPIA
PDXDC1
USP47
NSFL1C
H4C9
EPC2
TTC32
SDK1
ATF4
FANCF
FAM83B
ZNF33A
ANXA2
TMEM68
TGS1
NR1H3
ACP2
SYAP1
GPR39
CDK12
PSMD14
ZBTB25
ZBTB1
C11orf95
HDAC9
RFFL
LTA4H
RBBP8NL
ZNF117
HBP1
YWHAZ
LRRC8A
KYAT1
CCDC88C
DSG3
CPNE2
BLOC1S5
SRSF7
ZNF292
SRSF3
RILPL1
IST1
METTL9
POC1B
POC1B-GALNT4
ATAD5
AP2B1
DPY19L4
IGF2BP2
TIA1
TINAGL1
DAPP1
SMC2
FAM3C
ISY1-RAB43
ISY1
ZFAT
GADD45G
C15orf40
CEP120
MTBP
MRPL13
ISL2
SFPQ
PCSK5
TOP3B
ZNF518A
PEMT
TMEM230
TMEM87A
GANC
ERLIN2
ZFC3H1
THAP2
C2CD5
CCNJ
DUSP1
PALMD
SPINT1
JMJD1C
TRIM29
LRP6
FAM171A2
PHKA2
PBLD
HNRNPH3
MRPL49
FAU
EIF2D
KSR1
SNX27
CDC42SE1
GFM1
CALR
SLC25A36
WASF1
CDC40
VCPKMT
SOX2
CLP1
ABHD16A
WDR11
RAB14
ZC3H6
KRT80
ALKBH3
SPRING1
RNFT2
POU2F1
TP53I3
ERCC6L2
RAD51AP1
C12orf4
TTC14
TSEN54
CASKIN2
PMEPA1
FAM83A
CENPE
PSMF1
FETUB
ZNF184
CHMP1B
PSMD1
OPA1
TMEM249
SNX8
EPB41L1
ABLIM1
MAN2C1
ZNF124
RASA2
RSRC1
TIMM22
HNRNPA1L2
LLGL1
COPS7A
MAPK8
MKRN2
FKBP5
YIPF2
TIMM29
HGS
ARL16
ZSCAN12
PHF14
C12orf57
PRPF18
ADO
PLEKHG4B
BAZ1B
PRDM10
SMG5
FOS
DPP3
EMC4
TEX9
ANAPC5
RFX7
KIAA1217
KIAA0895L
ICE1
FANCC
NR4A1
FURIN
FRAT1
ZNF24
NADK2
DET1
SAXO1
RRAGA
ZFP36L1
PRKCSH
CCDC151
RPS26
ZNF668
HNRNPAB
NUDCD1
GPR158
ZNF646
DEK
C18orf21
RMI1
HNRNPK
ZNF775
SIX2
DHX8
MCM7
AP4M1
MRPS30
HSPB3
ACOT7
NUP93
ITGB3BP
EFCAB7
ANKRD12
LRRC8B
PTEN
KLLN
SLC9A1
FUZ
CD2BP2
KHDRBS1
MAPK10
STAT3
PRDM2
NBPF1
BACH1
HUS1
PKM
FEM1B
RCC1
ARHGAP42
SIRT4
CORO2B
TANK
ELOVL5
CUEDC1
DNAJC25-GNG10
DNAJC25
RBM25
DHX36
H3C3
KLF4
HOXA9
MRPS23
SCAND1
ATP5MC3
RGMA
CCT7
MAF1
PRADC1
GOLGB1
TRIB1
GID4
ATPAF2
RPL5
SF3A3
SCAF4
SUGP1
MAU2
SECISBP2L
GABPB2
INPP4B
ZNF785
SS18
FRAT2
MIDN
SLC20A2
ZNF189
MRPL50
NCOA5
PRKG2
CALM1
JRK
RPS29
TOR1A
FAM228B
SF3B6
BIRC3
AURKAIP1
CASC3
G3BP2
ZFHX2
MPHOSPH10
MCEE
GSTA4
EIF5B
TXNDC9
SNRPD3
GUCD1
FANCM
ZNF799
TIAL1
RNF19A
GRHL2
DNM1L
KANSL1L
SMC3
NME7
BLZF1
TCTEX1D4
BTBD19
TADA1
MEF2A
ZDHHC6
VTI1A
LPCAT4
ZNF277
DOCK4
ARHGDIB
MRPL53
UBE2D1
RHEB
NIPBL
MTERF1
COP1
ERGIC2
PDE4D
PCBP2
SRP14
COPB1
ATG10
ZMIZ2
H3-3A
SLC39A3
EEF1A1
UBOX5
FASTKD5
VPS8
NUDT3
ZSCAN30
STAT6
RPS20
COL4A6
COL4A5
SCAMP5
BARHL1
FOXP1
SNAPC3
LMO4
MRPS15
CTXN3
ZNF675
RPS3A
U2SURP
NUDCD3
TRA2B
UBE2E3
CIPC
FZD7
ZSWIM4
GTF2IRD1
BNIP1
RNF121
PPEF1
PLEKHA2
LOC100133315
CNIH4
UTP23
UCHL5
RO60
KRT13
TMEM196
MTIF2
ABCD3
NUAK1
ARHGEF12
GOLGA3
SUPT7L
SLC4A1AP
FLI1
ETV1
SLC16A13
UBQLN4
LAMTOR2
HSD17B12
CCND1
ANKRD50
NOTCH2
KRIT1
ANKIB1
PPP1R11
PHLDA1
COL5A2
ADPRHL1
MAT2B
PFKM
ZNF384
RWDD1
GDF11
C8orf37
TTC33
SENP1
RAB6A
HABP2
FZD2
PARP2
QTRT2
CCDC191
ARRDC3
SUMO2
CTR9
ZNF706
ATAT1
NKIRAS1
RPL15
E2F3
ZNF823
ZFAND5
RMND5A
RNF103-CHMP3
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
RPL7A
MED22
ST3GAL2
PLEKHG1
TNFRSF21
HNRNPA0
HNRNPH1
PUS10
TRERF1
NDUFAF4
KLHL32
TUBGCP3
CNTRL
YTHDF2
POLR1D
LNX2
PEX13
CPPED1
BBS1
SAPCD2
CBX1
EHD4
C12orf73
THNSL1
NADSYN1
CLCC1
AGR2
RPL12
LRSAM1
RPS21
PDSS1
GCNT2
PIK3R3
HACL1
BTD
SOX5
SASS6
SLC35E2B
PPP2R5E
GSDMC
FOSL1
TTC21B
TOP1
BRIX1
SSR3
VPS13B
POLR3F
DZANK1
H2BC14
H2AC14
C2CD4D
CCNT1
DHX33
MARK1
F3
MAIP1
ZC3HC1
UBE2I
POU2AF1
CEP162
NDE1
EEF1AKNMT
IL20
PDCD6
MTHFD2L
TMED1
CCNC
DSG2
KDM5C
LAMTOR1
MARF1
ARHGAP32
ZBBX
ALG10B
SH3GL3
GADD45A
TCF4
CITED2
UFSP2
TRMO
SERPINI1
PDCD10
CILK1
XPO6
ARHGEF5
DUS1L
MOBP
ZNFX1
KCTD1
NUS1
MECOM
ZBTB4
POLR2A
SEH1L
MORF4L1
PPIL1
SDHAF3
STT3B
SOGA1
HSF2
C2orf49
NCS1
PCIF1
CAV1
VAMP4
XPNPEP3
ST13
PIK3C2A
NFAT5
KIFBP
NEBL
ETV6
PTCD2
MRPS27
METTL3
IER3
NOL8
CENPP
HELB
MTRR
FASTKD3
TMEM95
RHOBTB2
ZBTB2
TMEM123
TTC4
H2AC11
H2BC11
GTF2A1
ZNRF2
SYNRG
CGGBP1
C3orf38
RC3H2
RPL22L1
KLHL20
FAM8A1
NPIPB3
MRPL40
COQ3
BRD3OS
HIRA
RNF43
MAP3K7
H2BC13