ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX330107 | ReN-VM
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◣ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

WDR74
FAH
CYP4F11
SNX16
SCML1
MTF2
SACS
ATXN2L
GADD45G
CAMTA1
ANKRD18A
HMGB1
CSRNP2
STK32C
LRRC27
NRARP
SPIN1
HDAC9
CAPRIN1
HMGN1
HES5
HNRNPDL
ENOPH1
CCNG2
BZW2
ANKMY2
FABP7
PPP1R15B
ARID2
KRTAP4-12
SLC6A9
ARIH1
PDE4B
KLF7
CITED2
ITPK1
LOC100996750
KRTAP4-7
ZNF717
RGR
ZNF775
NEU4
ACSL1
KRTAP4-8
KRTAP4-11
DNMBP
OAZ2
RTN4
RUBCNL
FAM181A
ZNF277
DOCK4
SPDYE14
SPDYE10P
TUBA1C
ALDH7A1
CDC34
IQCH
AAGAB
TSPAN13
MTDH
KDELR1
DDX17
ITPRIP
PCBP4
GADD45A
AGO1
ANKRD18B
NDRG2
VANGL2
KRTAP4-4
CTAGE15
ATAT1
APC2
KRTAP2-4
HBP1
PTPRK
SIPA1L1
OR8U8
OR8U1
UBTD2
STX6
CTAGE8
CTAGE4
POTEH
STAU2
KMT2B
MARCKS
PAQR6
LPP
CDK5R1
FMNL3
KRTAP4-5
NDUFB5
MRPL47
KDM2A
HES6
NREP
RHOJ
LRIG1
ADRM1
TMPRSS5
KRTAP1-1
RGS3
LRRN1
SPHKAP
KIF21A
KCNQ3
ESRRA
FANK1
RIPOR3
MAP7D1
PTGS1
TRIB1
VOPP1
TRDMT1
CCDC88A
ZNF358
ADNP
NCOA4
NFIB
PHYHIPL
C16orf46
NACC1
TEAD2
KRTAP2-3
EHF
KRTAP4-6
KRTAP2-1
PTMA
PLEKHG2
CCSER1
FUZ
ZBTB25
ZBTB1
PIPOX
OR2A7
TNRC18
COX20
TBC1D3L
TBC1D3K
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3F
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
KRTAP2-2
FAM227A
CBY1
NUDT19
KRTAP4-9
CTAGE6
PLCG1
TES
HSPH1
LIMCH1
ITGB8
SRSF6
CASTOR2
STAG3
GPC2
LZTS1
AMMECR1L
RNF44
CLEC18B
GPAT4
PFKFB3
BCAR1
SHF
TRMT2A
RANBP1
TAS2R41
TMEM132A
CLEC18A
FAM76A
CTAGE9
ZNF677
MIDN
CNN3
ZNF763
RRBP1
UQCRC1
FRAT1
KRTAP9-6
SNAPC3
ABAT
DDX5
MEGF9
TCF7L2
UBE2E3
CD24
SLC44A5
OTOP1
IRAG1
OR56A1
ATXN7L2
TEPP
KRTAP9-8
SHTN1
FBXL19
DYRK1B
POLR3E
CRIP2
ZSCAN2
FAM102A
PLXNB1
SOX6
ACVR1
SRSF7
ZSCAN9
POLB
PYDC5
IFI16
ANKRD6
ST7
ADO
KAT6A
CREBZF
TNFRSF11B
COLEC10
CDK2AP1
KRTAP1-3
ARNT2
CHD6
USP22
LOC647264
TMEFF1
NELFCD
OR4F4
PIMREG
ACSS1
FSCN1
TUBB2B
POTEM
NOTCH1
SENP8
MYO9A
TMPRSS7
PTPRD
NSUN6
ARL5B
SFXN5
TUBB
RSF1
AAMDC
EEF2K
POLDIP3
SYNCRIP
CELSR3
KMT5B
FILIP1L
LMO4
CDH18
PDE4DIP
SCD
DST
REST
OTX2
METTL11B
NRG1
OBI1
PRICKLE1
SRRM4
SNRPN
FLAD1
GRK6
PLPP2
IFRD1
MED12
GSN
HESX1
MOBP
ETV1
VENTX
TDGF1
NADK
PMEPA1
WFDC8
PSMD9
HPD
ZNF343
FGD4
CER1
IER5L
CELF3
DNMT3B
DAGLB
ADAM28
NANOG
PHF5A
ACO2
FBP1
LIN28B
ETV4
PPP1R16B
MTRNR2L2
RIF1
ESRP1
GIMAP5
CYTH2
KIFBP
FBXO40
TMCC1
FZD2
CCDC169-SOHLH2
CCDC169
HGS
ARL16
LRRTM3
SPIC
ZFC3H1
JPT1
PDPN
USP44
THAP2
CCT2
ZNF532
PDCL
CDC14B
SLC2A14
FGFR2
CEP41
MTRNR2L8
GPSM3
DHX32
DGLUCY
NDUFS5
WBP1L
GDF3
LRRTM4
BFSP1
MCCC1
TIMP4
SFRP2
RFX4
WDFY2
EEF1A1
ADA2
TJP2
FOXP1
CARHSP1
NEBL
ZNF304
SASH1
GET3
DUSP12
AK4
WDR49
DDX3X
AHCYL2
TBC1D16
UGT1A6
SPRY4
TNC
SINHCAF
FAM120B
NDST1
PLEKHG1
H3-3B
WNT5B
ANK2
MACROH2A1
TOMM40
C20orf96
ST18
UFD1
CDC45
SLC7A5
AASDH
SGMS2
PITPNM2
AUH
RTBDN
SIX2
SLC33A1
KDM3A
PDIA4
KCNN2
PXMP4
SLFN12
DPPA4
ZNF195
CCDC92
PRRC2B
SLC25A36
TMUB2
WDR36
TMEM41B
CCN2
FOXO6
MSANTD4
GCNT2
NRCAM
STMN1
NUP160
CFLAR
SLC16A13
CDH10
CFL1
PGK1
DISP3
TESK2
BRINP2
ZNF428
DACT3
KLF5
VASH2
OSBPL1A
EPB41L1
CNGA1
PIK3R3
CFAP20
ETV6
KRTAP3-1
DICER1
KCNIP4
F11
PALM2AKAP2
PIN4
TACC2
SLCO5A1
OGA
LINGO1
ZBTB45
RASAL2
MBOAT2
UBQLN4
CD200
ZNF202
CTNND2
ANAPC15
CD2BP2
HOXB1
KNTC1
ERMN
DPP3
C22orf39
LAMTOR2
DHX8
LIN28A
PPP1R18
SMAD3
ARHGAP42
EMC9
TIAL1
GEMIN7
SH3GL3
LLGL1
DCLK1
SMARCAD1
SLC25A11
RNF167
WASF1
CDC40
VEZT
FGD6
PLCH1
YLPM1
CCL2
FAM153B
PIF1
CAAP1
DET1
TUT1
CNR2
CEP170
TCHP
ISL2
ARID5A
SLC10A2
SDCCAG8
RNF213
CTTNBP2NL
RAB30
G3BP1
KLHL24
JUP
PPME1
C2CD3
PLAGL1
SP5
ZFYVE1
MEF2C
SET
C1R
CHN2
EMSY
ZFAND3
RAD54B
F11R
IFIT3
SFPQ
THEM4
EGR3
ERGIC2
DHRS3
SPATA12
CLCF1
LYPD1
H4C14
CCDC167
YEATS2
TLX3
IL17RD
PWWP2A
PES1
ST6GAL1
ETFB
KRT8
PCYT1B
NEDD9
ZNF627
GOLGB1
AKIRIN1
CEP63
ANAPC13
ZBTB40
E2F7
ZDHHC5
SAXO1
RRAGA
RBM39
ZSWIM4
RNF19A
TRPM3
PCDHB8
MDK
ITGB1
AFF1
ZNF318
ZBTB8OS
RBBP4
FAT1
ACCS
RGPD2
RGPD1
MANSC1
HEXIM2
CNP
TRIM22
TIA1
JAG1
BORCS6
SMIM14
MOSPD3
ARF4
TCN2
KIAA0895L
ABCB8
EP300
FSBP
TSNAXIP1
RANBP10
RPL27
IPO11
HLTF
GSPT2
PDE4D
SYAP1
TMEM114
IL23A
CNKSR3
ZBTB6
SYNPO2
ZNF37A
YWHAQ
CCDC200
RBBP6
LPCAT4
PSMB7
ZNF469
ADAR
ZCCHC12
SPAG9
PCDHB5
STOX2
NKIRAS1
H4C15
HSPA13
DTNA
ACTR1A
GFM2
RNF43
ESR1
C1orf127
NFE2
DERA
BBS7
TSGA10IP
CLEC9A
EXOC5
AP5M1
UQCRQ
GDF9
CPVL
AKAP9
IP6K2
GDF5
CEP250
OARD1
NFYA
SPHK2
SPAG4
TRAK2
STRADB
SYTL2
ZNF106
AMOTL2
SLC2A11
WBP11
PELI1
INKA2
C12orf60
HIP1R
CDK12
MMACHC
SLCO4C1
TNFRSF21
HACL1
BTD
DLG2
TCF4
MMP10
H2AZ2
PSME3IP1
PDP1
SPHK1
DLX5
KLHL4
RSPH14
RASSF8
ZNF254
TFDP2
CCDC130
SCOC
VGF
CALD1
HEBP2
RSPRY1
METTL7A
SYBU
ZNF649
GALNT8
ZCCHC8
RIMBP2
MAP2K5
SMARCB1
BLOC1S4
PAIP2
GFRA1
PCDHB13
PER2
PBLD
HNRNPH3
SUCLA2
RBMX
PCDHGC4
GRHL2
DPPA2
MTRNR2L9
ELOVL5
EGFR
ZNF506
PKNOX2
SOX5
PTCD2
MRPS27
KLHL5
PRR5L
DNM1L
KLF17
TTF2
SIRT4
RFFL
PROM1
NASP
RCOR1
RIMKLB
ATAD2
BCL9
TLE3
LCOR
ZNF608
AFAP1
INSM1
INTS9
HMBOX1
C11orf58
MAP3K9
ZCCHC14
PAG1
SNX27
ARHGEF37
CHD8
TINAGL1
DNM2
HNRNPUL1
CCDC146
G3BP2
LOC389199
MRGPRX3
SDHD
ID1
HEXIM1
ZBTB18
TBC1D17
AKT1S1
COPS7A
ERBB2
TBC1D31
GXYLT2
TSPAN19
LRRIQ1
BTBD3
CHMP7
IREB2
USP53
PACRGL
LTBP1
ZNF180
PRM3
CDH6
SHROOM3
RAB4B
PNRC1
TUT7
BCAT1
PAXBP1
CTH
RAB34
FAM220A
TAX1BP3
EMC6
RAP1A
OGT
ADGRA1
SMARCA2
PHLDB2
RABGAP1L
IFTAP
C6orf132
C2CD4D
RPL15
ARHGAP24
HOXA9
MCM7
KMT5C
AP4M1
RGS12
ZSCAN31
NUFIP2
ZBTB26
PGM2L1
MAP1B
SERPINB6
MS4A12
LNX1
PTX3
OLIG3
RTRAF
HNRNPC
RAB25
PEX11G
ZNF474
KIAA1522
IPO4
NARF
MAST4
UBR2
NUP214
EIF1AX
SPRING1
RNFT2
CALR3
C19orf44
TBC1D10B
RBBP9
MYLPF
SLC2A4
ETFDH
C4orf46
ACSBG2
LDB1
XAB2
TSTD2
NCBP1
COX8A
BAZ2A
YIPF3
POLR1C
ZSCAN10
GBA
MAD2L1BP
GTPBP2
MRPS30
FAM76B
CEP57
KCNMB2
IGF1
TPCN1
IQCD
RFX1
CCPG1
C15orf65
ARHGEF19
GAS2L3
ZNF250
PBX1
GID4
ATPAF2
PLEKHA5
FZD1
TMX2
MED19
POU2F1
NEMF
SMC4
IFT80
CRISPLD1
PQBP1
TIMM17B
MEIG1
RAPGEF5
MTUS1
ZNF101
DPP4
GTF2H4
TCF20
KANSL1L
ZNF292
TAL1
KCTD6
ZNF3
SLAIN1
RPUSD4
FAM118B
GOLPH3L
CCL26
SEC22B
MAP2
CPSF4L
CLIP1
EXOSC2
IGSF9
LIFR
GRIN3A
H4C9
ILF2
RBP1
KXD1
FGF19
MMRN1
YWHAG
APH1A
ZBED5
PRKRIP1
CD300LB
PPP1R15A
ERV3-1-ZNF117
ERV3-1
GPBP1
BTG1
RND1
QPRT
FOXN3
CHMP4B
CPA5
ZNF593
C1orf232
PRTFDC1
LYSMD3
GGH
RBPJ
NR2F1
NEK2
CCDC172
BPNT2
NLGN1
SAPCD2
ZNF268
SLC4A2
CDK5
XPC
LSM3
ENOX2
RGSL1
ZBTB20
SLC3A2
ZSCAN12
OR13C2
FEM1A
LDAH
CLPB
RAB5C
ZNF85
CDK5RAP2
HNRNPL
HIP1
GRAMD2B
ADD2
LMAN2L
ZHX3
VCPKMT
PTPRZ1
SPTBN1
ZNF576
TTC39B
IRGQ
FNBP1L
UBE2T
APPL2
ZNF8
BSDC1
CCDC171
SUFU
MCTS1
SEPTIN9
ZIK1
CDK16
DDX20
DCLRE1C
NTMT1
ZNF273
ZMAT2
CHD9
WTAP
WDR33
SOD2
BMPR2
CABYR
ANKRD65
NODAL
OXNAD1
DSE
DPH3
ABLIM1
METTL9
ZSCAN18
SMC3
EIF3F
CIAO2A
ZNF548
TBC1D9
TSPYL4
KMT5A
EID3
NCLN
PTPN12
INSYN2B
ZBTB38
NDUFS7
LRRC23
ING4
SCNN1A
MMP11
CA8
SLC35G4
MAPK14
GNA12
ICE1
DOCK9
LGR6
DYNLL1
RAI14
DACH2
KBTBD2
AP3M2
EVI5L
IGDCC3
ZNF140
REEP6
PCSK4
TMEM220
CENPA
PRDM14
HLCS
RIOX1
SRPRA
C16orf78
GBF1
ACTR2
VMP1
PTRH2
CLIC1
NDE1
MYO1B
ANK3
NUBP1
FEZ2
CPNE2
DDA1
ZNF335
UFSP2
EFCAB8
MTHFD1
MEA1
CX3CL1