ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5771664 | N2102Ep
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◣ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

OTX2
NRG1
REST
MOBP
SOX6
METTL11B
ETV1
FGD4
GDF3
HESX1
ZNF343
DNMT3B
JPT1
FGFR2
SNRPN
WFDC8
FLAD1
VENTX
TIMP4
AK4
FBP1
TDGF1
FZD2
LIN28B
PIPOX
CDC14B
PRICKLE1
PPP1R16B
MED12
PDCL
CNGA1
GEMIN7
CNR2
UGT1A6
PITPNM2
OBI1
KLF17
ACCS
SLFN12
DNMBP
SACS
PSMD9
HPD
C22orf39
RIF1
USP44
DPPA4
TBC1D16
CCDC169-SOHLH2
CCDC169
DHX32
CER1
ST18
MBOAT2
PRRC2B
DET1
NADK
METTL7A
NDST1
PLEKHA5
PDPN
SLC10A2
PCDHB8
LIN28A
OVCH1
GSN
CAAP1
PCDHGC4
WDR49
FBXO40
CFLAR
SYNPO2
CCL2
IER5L
KCNIP4
KIAA1522
ACSBG2
ANK2
GADD45G
DCLK1
TCHP
HDAC9
ZNF318
EPB41L1
F11
ETV4
RIMBP2
SLC2A11
PMEPA1
TRPM3
PPP1R18
PBDC1
SPIC
SASH1
RFX4
GSPT2
TTC39B
AUH
KLHL4
CCN2
TMEM220
ESRP1
GALNT8
RGSL1
KLHL5
ZNF532
HOXB1
PCDHB5
SPAG9
EFCAB8
KRT8
TMCC1
LIFR
ZNF202
SMAD3
OLIG3
HLCS
CCDC92
IFIT3
LRRTM3
MRGPRX3
RAP1A
JAG1
CCDC167
ZFYVE1
SOX15
LRRTM4
CDH6
DERA
ADA2
LYPD1
AHCYL2
MACROH2A1
MYOM1
LPCAT4
CCDC172
TACC2
ITPRIP
SERPINB6
PCDHB13
SOX5
PXMP4
MTF2
KRTAP3-1
FAM153B
CLEC9A
ADGRA1
RND1
SCNN1A
LTBR
RNF213
GCNT2
KMT2B
ZSCAN12
FOXP1
MAP2K5
SGMS2
ERICH3
NEBL
GRAMD2B
NLGN1
HMGB1
TINAGL1
KCNMB2
SUCLA2
SLCO4C1
MAN2C1
SFT2D3
TRIM22
DACH2
SPATC1L
EIF4B
DUSP12
PLAC8
ACSL1
ODF2
C16orf78
C1R
GRM4
IL1RAPL1
SUPT4H1
ZNF469
SLCO5A1
IL23A
RHCE
CNBP
IFRD1
TRIM54
ERMN
ABCF3
SKA2
PRR11
USP48
CPN2
ARID5A
RNF43
RASSF8
RIPOR3
CPNE2
UBE2C
AKIRIN1
FGF1
GOT1L1
KLF5
CA8
SLC16A8
DAGLB
SRRM4
RGS3
KMT5C
ANKDD1B
RNASEL
PBX1
SPATA12
DPPA2
KDELR2
DCLRE1C
ZNF649
TEPSIN
NDUFAF8
HLTF
DHRS3
KLF7
PACSIN2
VOPP1
THEM4
LEMD2
LOC105372977
GRK6
PLAGL1
TSGA10IP
ZNF747
SLC2A14
ABCB8
ADGRL2
FAM162B
SRC
RIMKLB
MMP10
PLPP2
WNT5B
PCYT1B
ARSD
CCDC171
YWHAQ
EGFR
SHF
LLGL1
TMEM202
ZBTB45
MS4A12
PTMA
ATOH1
IL20
RAB34
PLEKHG2
MANSC1
DPP4
CYTH2
CDH10
RNF19A
RBMX
NSMCE4A
BABAM1
DGLUCY
RRBP1
NODAL
RAD23B
PCDH18
FMN1
TUBB
WBP1L
NFE2
RBM47
CEP164
CORO6
GET3
GRHL2
TESK2
CTNND2
STOX2
CTIF
EIF1AX
NDUFS7
DOLPP1
HSH2D
PGP
CD300LB
G3BP1
PDE4D
SET
EIF4G1
SERPINF1
ETV6
ALDH7A1
TAL1
SORBS2
RAD54B
FSBP
SLC35G3
ISL2
RAB25
GJA1
RPS24
WBP1
AHCYL1
PSMB3
NTNG1
MAT2B
FUT10
SFRP2
TMEM114
CABLES2
BCAT1
TNC
DACT3
KHSRP
IL17RD
RBPJ
AP3M2
C22orf31
RAC1
CELSR3
STMN1
PWWP2A
EIF4E3
TOM1L2
DRC3
CNOT3
S100A2
TNRC18
SMARCC2
NICN1
RBP1
DNM2
CDKL5
VCP
ZSWIM4
SP2
PAIP2B
NRARP
FAM227A
CBY1
WDR74
NDUFB5
MRPL47
FUZ
NOTCH1
DDX17
SNX16
ZSCAN2
CELF3
ADAM28
ARID2
NANOG
PHF5A
ACO2
MTRNR2L2
GIMAP5
KIFBP
FBXL19
HGS
ARL16
IQCH
AAGAB
ZFC3H1
THAP2
CCT2
CEP41
MTRNR2L8
GPSM3
NDUFS5
ZNF775
BFSP1
MCCC1
CAPRIN1
WDFY2
EEF1A1
TES
ARIH1
KDM2A
TJP2
CARHSP1
ZNF304
DDX3X
DST
SPRY4
SINHCAF
FAM120B
PLEKHG1
SNAPC3
H3-3B
ACVR1
TOMM40
VANGL2
CAMTA1
C20orf96
UFD1
CDC45
SLC7A5
CHD6
AASDH
RTBDN
SIX2
SLC33A1
KDM3A
PDIA4
KCNN2
SRSF7
ZNF195
SLC25A36
TMUB2
WDR36
TMEM41B
FOXO6
MSANTD4
NRCAM
NUP160
MARCKS
ZSCAN9
SLC16A13
CFL1
PGK1
DISP3
BRINP2
ZNF428
VASH2
OSBPL1A
PIK3R3
CFAP20
DICER1
TRMT2A
RANBP1
SYNCRIP
PALM2AKAP2
PIN4
OGA
LINGO1
POLB
RASAL2
UBQLN4
CD200
HMGN1
ANAPC15
CD2BP2
KNTC1
DPP3
LAMTOR2
HSPH1
DHX8
HES5
CSRNP2
ARHGAP42
ESRRA
EMC9
TIAL1
SH3GL3
SMARCAD1
GADD45A
SLC25A11
RNF167
WASF1
CDC40
VEZT
FGD6
PLCH1
YLPM1
PIF1
TUT1
CEP170
SDCCAG8
OAZ2
CTTNBP2NL
RAB30
KLHL24
JUP
PPME1
C2CD3
SP5
MEF2C
CHN2
EMSY
ZFAND3
F11R
SFPQ
EGR3
ERGIC2
CLCF1
H4C14
YEATS2
TLX3
PES1
ST6GAL1
TRDMT1
ETFB
STK32C
LRRC27
NEDD9
ZNF627
GOLGB1
LIMCH1
CEP63
ANAPC13
ZBTB40
E2F7
ZDHHC5
SAXO1
RRAGA
RBM39
MDK
ITGB1
AFF1
TMEFF1
ZBTB8OS
RBBP4
FAT1
ADRM1
RGPD2
RGPD1
HEXIM2
FAM181A
CNP
TIA1
BORCS6
SMIM14
MOSPD3
ARF4
TCN2
KIAA0895L
HNRNPDL
EP300
TSNAXIP1
RANBP10
RPL27
ATAT1
IPO11
ENOPH1
CNN3
SYAP1
CCDC88A
CNKSR3
ZBTB6
ZNF37A
ZNF358
CCDC200
RBBP6
HBP1
PSMB7
ADAR
ZCCHC12
NKIRAS1
SENP8
MYO9A
H4C15
HSPA13
DTNA
ADNP
ACTR1A
GFM2
POLDIP3
ESR1
C1orf127
BBS7
EXOC5
AP5M1
UQCRQ
GDF9
CPVL
AKAP9
IP6K2
GDF5
CEP250
OARD1
NFYA
FILIP1L
SPHK2
SPAG4
TRAK2
STRADB
LPP
SYTL2
ZNF106
ZNF763
AMOTL2
WBP11
PELI1
INKA2
C12orf60
HIP1R
CDK12
MMACHC
TNFRSF21
HACL1
BTD
DLG2
TCF4
H2AZ2
PSME3IP1
PDP1
SPHK1
TMPRSS7
DLX5
RSF1
AAMDC
RSPH14
ZNF254
TFDP2
CDK5R1
CCDC130
SCOC
VGF
CALD1
HEBP2
RSPRY1
SYBU
PIMREG
ZCCHC8
POLR3E
ABAT
SMARCB1
BLOC1S4
PAIP2
GFRA1
PER2
PBLD
HNRNPH3
PYDC5
MTRNR2L9
IFI16
PTGS1
ELOVL5
ZNF506
STAG3
GPC2
PKNOX2
PTCD2
MRPS27
PRR5L
DNM1L
TTF2
SIRT4
RFFL
PROM1
NASP
RCOR1
CCNG2
ATAD2
BCL9
TLE3
LCOR
ZNF608
AFAP1
INSM1
INTS9
HMBOX1
C11orf58
MAP3K9
ZCCHC14
PAG1
SNX27
KIF21A
ARHGEF37
CHD8
PDE4B
HNRNPUL1
CCDC146
G3BP2
LOC389199
SDHD
ID1
HEXIM1
ZBTB18
TBC1D17
DDX5
AKT1S1
COPS7A
ERBB2
TBC1D31
GXYLT2
TSPAN19
LRRIQ1
BTBD3
CHMP7
IREB2
USP53
PACRGL
LTBP1
ZNF180
PRM3
SHROOM3
RAB4B
PNRC1
TUT7
CYP4F11
PAXBP1
CTH
FAM220A
TAX1BP3
EMC6
OGT
SMARCA2
PHLDB2
RABGAP1L
IFTAP
C6orf132
C2CD4D
RPL15
ARHGAP24
HOXA9
MCM7
AP4M1
RGS12
ZSCAN31
NUFIP2
ZBTB26
PGM2L1
MAP1B
HES6
LNX1
PTX3
RTRAF
HNRNPC
PEX11G
ZNF474
IPO4
NARF
MAST4
UBR2
TRIB1
NUP214
SPRING1
RNFT2
CALR3
C19orf44
TBC1D10B
RBBP9
MYLPF
SLC2A4
MIDN
ETFDH
C4orf46
TMEM132A
LDB1
XAB2
TSTD2
NCBP1
COX8A
BAZ2A
YIPF3
POLR1C
ZSCAN10
GBA
MAD2L1BP
GTPBP2
MRPS30
FAM76B
CEP57
UBTD2
IGF1
TPCN1
IQCD
RFX1
CCPG1
C15orf65
ARHGEF19
GAS2L3
ZNF250
GID4
ATPAF2
FZD1
CITED2
TMX2
MED19
POU2F1
NEMF
SMC4
IFT80
CRISPLD1
PQBP1
TIMM17B
MEIG1
RAPGEF5
MTUS1
ZNF101
NELFCD
GTF2H4
TCF20
KANSL1L
ZNF292
KCTD6
ZNF3
SLAIN1
RPUSD4
FAM118B
GOLPH3L
CCL26
SEC22B
ITGB8
MAP2
CPSF4L
CLIP1
EXOSC2
IGSF9
GRIN3A
H4C9
ILF2
KXD1
FGF19
MMRN1
YWHAG
APH1A
ZBED5
PRKRIP1
PPP1R15A
MEGF9
ERV3-1-ZNF117
ERV3-1
TSPAN13
GPBP1
BTG1
RNF44
QPRT
FOXN3
CHMP4B
CPA5
ZNF593
C1orf232
PRTFDC1
LYSMD3
GGH
NR2F1
NEK2
BPNT2
SAPCD2
ZNF268
SLC4A2
CDK5
XPC
LSM3
ENOX2
ANKRD6
ZBTB20
ST7
SLC3A2
OR13C2
FEM1A
LDAH
CLPB
RAB5C
ZNF85
CDK5RAP2
HNRNPL
STAU2
HIP1
ADD2
LMAN2L
ZHX3
VCPKMT
PTPRZ1
SPTBN1
ZNF576
IRGQ
FNBP1L
UBE2T
APPL2
ZNF8
BSDC1
SUFU
MCTS1
SEPTIN9
ZIK1
CDK16
FAM102A
DDX20
PTPRD
NTMT1
ZNF273
FMNL3
ZMAT2
CHD9
MTDH
WTAP
WDR33
SOD2
ZNF277
DOCK4
BMPR2
CABYR
ANKRD65
OXNAD1
DSE
DPH3
ABLIM1
METTL9
ZSCAN18
SMC3
EIF3F
CIAO2A
ZNF548
TBC1D9
TSPYL4
KMT5A
EID3
NCLN
PTPN12
INSYN2B
ZBTB38
LRRC23
ING4
DYRK1B
MMP11
SLC35G4
MAPK14
GNA12
ICE1
DOCK9
LGR6
DYNLL1
RAI14
KBTBD2
EVI5L
IGDCC3
ZNF140
REEP6
PCSK4
CENPA
PRDM14
RIOX1
SRPRA
GBF1
ACTR2
VMP1
PTRH2
CLIC1
NDE1
MYO1B
LMO4
ANK3
NUBP1
FEZ2
DDA1
ZNF335
UFSP2
MTHFD1
MEA1
CX3CL1
ZNF737
TOMM40L
INTS12
GSTCD
ERICH6B
ZNF668
WLS
CHD7
SLC7A11
DAOA
GCDH
ZNF286A
SPEM1
RRAGD
NCOA4
SEL1L
PTPRK
CBX1
WARS1
SLC25A25
GREB1
MCM10
TAGLN3
NDUFB4
MFSD6
NIN
NME7
BLZF1
TMEM143
SYNGR4
ACYP2
NRL
DCAF11
ZNF589
ZFHX2
PIK3CA
TRIM38
NSUN6
ARL5B
AKR1A1
BAZ1B
KHDRBS1
SOX2
CCDC124
HAS3
EMID1
GLI2
VPS50
HEPACAM2
TTI2
PRCC
HNRNPAB
FXR1
GPR137