ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX059713 | VCaP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◣ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

RAE1
NUDT3
SLC45A4
DNPEP
CXCL8
FRMPD1
TENT2
RUVBL1
EEFSEC
LFNG
SLC22A10
TMEM40
SAXO2
EFL1
GABRA2
ZBTB18
NFIC
ISX
FKBPL
UGT2B10
WDR74
PDGFA
PPP1R15B
MTNR1A
ULK4
IFT43
DUSP6
HDGFL2
RHOH
SOCS2
JPH3
ATXN2L
FAM214A
BDNF
MAX
LPCAT3
NOVA2
TLK1
ALDH3B2
MILR1
ERCC1
UGT2B28
KCTD7
PYCR2
ZNF771
PRRT1
POLR2J3
C1QTNF9
FAM222B
DDX19B
AARS1
STX16
SCAMP2
ARHGAP22
STK32A
NUP160
ITPRID1
FBXL3
MTRNR2L8
CPLX1
WIZ
KRT4
RB1CC1
SNX16
LAX1
TFF1
B4GALT7
HIVEP1
TYW3
CRYZ
LOC114841035
FKBP2
MTRNR2L2
MAPKAPK3
SPDEF
SIRT4
IMPDH1
IFRD1
MAPK12
SPIN1
MEIS2
PAX6
SYK
TRNP1
TLE4
ADAMTS3
SKIL
UPK3BL1
TRABD
UPK3BL2
TMEM237
SAMD12
MYH10
CYP3A43
SRI
NBR1
TASOR
RAB32
KCNIP2
RPS27
PAK4
C17orf75
MYO7B
TBCEL-TECTA
TBCEL
TRIQK
ARHGEF38
RGPD2
RGPD1
RXFP4
PKP2
ZBTB20
RFESD
TLE3
CD8B
SOD2
NELFB
VAT1
CFD
FAM53C
CDC25C
IGIP
SLC25A45
XDH
MEMO1
SLC30A4
MGAT5
CTXN3
SSTR5
SMIM13
DHRS13
PRSS23
ARHGEF7
ACACA
HERC5
PIK3AP1
ZMYND8
ATL3
C11orf24
RNF19A
MAP2K6
ZNF200
KAT6A
KIAA1217
NOXA1
PPFIBP2
NR1D1
PMVK
MACROD1
MB
GRHL2
PIWIL2
DNAH5
APOF
NAV3
BCL2L13
NEDD4L
ATP6V1G1
EBAG9
TJP2
DCAF10
TMPRSS11F
TTC3
PIGP
CDS1
FAM47E-STBD1
FAM47E
PRSS27
CEP85L
ADAM17
TCP11L2
SLAIN2
CARS2
DDX39B
GGACT
SLC39A13
POLDIP3
HELB
TRIM44
PNLIPRP1
ZBTB7B
ZBTB45
NREP
OSGIN2
ZBTB21
FAM107B
CD276
HEXA
ALDH18A1
GRB7
LAMP1
HNRNPA2B1
CBX3
GET4
SLC39A10
EPC2
WDTC1
AP5Z1
DDX17
EIF4G2
STRBP
SLC25A25
NAIF1
GABARAP
SEPTIN7
TMEM199
POLDIP2
WASHC2A
KAT5
WASF2
MRPL45
WASHC2C
ERAL1
UBE2Q1
NEURL2
CTSA
GPR137
BAD
CDK4
HAGH
FAHD1
SFSWAP
GSK3B
ATP6V0D1
NAGPA
RSF1
AAMDC
SPNS1
MSMO1
CRBN
RPGRIP1L
FTO
UBE3B
TRMO
RBBP8NL
RBM48
PEX1
MTBP
MRPL13
DAGLA
PSMD3
MDM2
SUMF1
SLC35B1
CUTA
CLCN7
HES1
SMARCD2
USP49
TOMM22
C1orf174
DDX42
CCDC47
SRSF1
SUPT7L
SLC4A1AP
RPUSD4
FAM118B
C8orf33
GBA
ILF3
STARD3
TRIB1
ISY1-RAB43
ISY1
ZZZ3
POLR3F
DZANK1
SERPINI1
PDCD10
COMMD9
RBBP5
MTHFR
CLCN6
MAN1B1
LZTR1
STAT6
TSR3
GNPTG
THAP7
VPS50
HEPACAM2
UNC13D
VPS33A
BHLHE40
FAM72C
SRGAP2B
FAM72D
MIEN1
OSGEP
APEX1
ZNF335
SLC35A5
ATG3
PGAP3
ERBB2
UVRAG
TBL1X
TRMT2A
RANBP1
CCDC59
MCOLN1
FANCA
PSMB7
POLR2J
CLPTM1
AURKAIP1
SUPV3L1
SUPT6H
SDF2
SNRPE
TFPT
PRPF31
IDH3B
RPS26
RAD9A
BLOC1S1
SMN2
SMN1
DMAC2
YJU2
NUP214
SRGAP2
FAM72A
TBRG4
WASHC5
NSMCE2
MOCS3
DPM1
VIRMA
TET3
POLR2J2
ZNF408
ARHGAP1
C5orf51
ATF3
SALL4
XPO7
CLN3
MRTO4
EMC1
HPS5
GTF2H1
INO80C
PDAP1
BUD31
SLC25A53
TSFM
GET3
TOP3A
SMCR8
PFKM
YAP1
CDKAL1
MFSD1
PPP6R1
ZNF165
SAP30BP
RECQL5
CASC3
ATP5MF-PTCD1
ATP5MF
NME1-NME2
NME1
DOK7
SLC4A2
SLIRP
ALKBH1
DVL2
PAXBP1
TRMT1
C16orf91
ZSCAN22
PCIF1
U2SURP
CEP162
ZNF383
UBE3C
ZDHHC6
VTI1A
AMDHD2
EIF2D
SENP1
CDK12
ARHGAP32
FLOT2
TAS1R1
NOL9
WWOX
SLC25A11
RNF167
AXL
ZSCAN25
ATAD2
PMS1
ORMDL1
MTRNR2L9
SMG7
GATB
MEF2C
GFM1
ITFG2
FLOT1
MRPS15
FAM83A
PTBP1
KRR1
UBE2B
CDKL3
HUS1
PIP4P1
RTF2
CLSTN1
DDX41
DNAJC11
NUP107
ZNF668
VAC14
GP1BB
INTS10
KAT8
SH3GL1
NDUFA2
IK
SUMO3
WBP2
E2F6
NDUFA4
PHAX
ZNF576
IRGQ
TRIP4
CCNT1
LANCL2
ECH1
ANKS6
UBAP2L
C1orf43
SEMA3B
SSBP1
ADGRB3
MOB1B
CCDC97
MIER1
DAZAP1
RAD51AP1
C12orf4
RRP15
PSME3
UBE2I
SHLD2
GLUD1
HNRNPH2
SUSD4
ST7
TNC
KANSL3
SLK
SRGAP2C
KCNMA1
FAM72B
FGGY
SUMO2
NGDN
TPP1
ALG6
HM13
SCAMP5
PPWD1
CENPK
UBQLN1
WDR62
THAP8
OTUD7A
THRAP3
USP30
XRCC5
SLC33A1
BIRC3
ADAM23
TRAF4
EPS8
SPATC1L
RPTOR
ABCB8
SEPTIN9
STX6
TBC1D30
GPATCH3
GNS
SMARCA4
MRPS7
GGA3
RAB3IP
ATG14
LARP1
TXN2
ZNF2
TSN
PSMD1
TMEM116
ERP29
ADGRL1
VPS11
LIMA1
ITGB3BP
EFCAB7
CACTIN
STAU2
ZNF524
RABGAP1L
FIZ1
ELP3
RALGDS
EIF5A2
TMEM208
LRRC29
BLOC1S4
DENR
PPP5D1
CALM3
MYCL
PRMT3
RTEL1
ACVR1B
NUDCD3
DICER1
MAP3K7
MRPS11
MRPL46
BAX
ZNF497
RXRA
SBK1
FAIM
NSD1
ZCCHC4
SPHK2
RPL18
KDM3A
QRICH1
TRUB2
COQ4
NPEPPS
OAZ3
MRPL9
SCYL3
RMND1
ARMT1
ARID5B
NCBP2AS2
NCBP2
PSMD5
EIF3F
FSCN1
TNPO3
PLAGL1
KDM1A
AP2A2
SF3A3
KDM7A
GPRC5A
TFDP1
DDX23
VWA7
NOL8
CENPP
LMAN2
GRHL1
PUS10
PEX13
NDUFAB1
FLYWCH1
TMEM18
EIF1AD
BANF1
NOP16
HIGD2A
DNAJC30
BUD23
PEAK1
METTL1
HMG20A
EEF1AKMT3
DDX46
DPP3
HDAC6
CBX7
STRA6
SAP30
ATP6V1C1
STYXL1
PRKCA
BMS1
NEXN
LSG1
DIP2A
UBE2E2
BAG6
SFXN1
RRAGC
UPK3B
KDM4C
FASN
NDUFS7
SMG8
NVL
SPTAN1
REEP4
METTL2A
DGAT2
ATP6V1H
PRAME
MRPL10
LRRC46
SH2B1
RPS11
LUC7L2
TMEM59
SYNCRIP
DHRS3
KRT80
TM2D2
ADAM9
TIMM22
LTO1
SERP1
EIF2A
COX16
PDCD6IP
NFKBIA
NUF2
BNIP1
HOOK2
TTC32
TMEM203
NDOR1
CHD7
ZNF507
BRPF1
ATG101
PLEKHF2
HOXC13
MINDY2
PRR3
GNL1
SART3
ISCU
ZGPAT
CAPRIN2
C17orf58
ARFRP1
MAN2A2
CHIC2
ZNF830
CCT6B
LRFN4
CACNA2D2
CHMP7
NFU1
MAN2C1
USP28
PHF21A
MYL12A
ACTN4
PSMG2
CEP76
KDSR
NDUFB5
MRPL47
WWP1
SF3B3
COG4
SSNA1
ANAPC2
AAAS
RNASEK
EIF3H
FEM1A
BACH2
FOS
FMC1-LUC7L2
FMC1
PATZ1
JMJD1C
CFAP206
RPS14
NAPA
TFAP2C
IKZF2
AIFM1
KMT5B
DTNB
CENPBD1
FAM133B
MAZ
IGF1R
COPS7B
KLHL12
LRRC23
METTL2B
USF2
RFX1
SYT7
INTS1
CUTC
COX15
THAP6
HSPBP1
GTF2H4
UBE2L3
GABRR1
PHIP
GTF3C5
PRKCE
WBP1L
CSTF1
AURKA
TBL3
S100A2
DPP8
NDUFA9
ATXN7L3
AKAP3
EIF2S1
ATP6V1D
ADCY9
VPS52
RPS18
UBXN2A
PRPF6
CHD1
URM1
LASP1
VGLL4
UTP3
MRPL1
ETV4
PTK2
ATXN7L2
ZCWPW1
MEPCE
XAB2
SEC13
RBPJ
MSS51
PXT1
KCTD20
FCHSD2
AFF4
RPL5
COMMD2
CABIN1
IFT140
CRAMP1
NFASC
CCDC174
SPRTN
EXOC8
ZNF17
TMEM41A
IRF2BP2
BSG
MAP3K1
EFNA3
HSPA9
COASY
TTC31
MARCHF2
CCDC142
TSC1
GFI1B
C1QTNF1
COMMD4
RBKS
BABAM2
PSMA1
WDR53
FBXO45
PTPN12
GCN1
EIF4A2
BRIX1
LYPLA1
FAM162A
CCDC58
FAM98B
DNAJB12
ABT1
SLC24A1
INTS14
OAZ1
FZR1
ZNF3
TAOK1
GOLGA3
PHB2
KLHL32
GFER
SCAF11
KMT2D
BIRC2
UPF1
TIMM50
GOSR2
ZMPSTE24
RPL23A
PTPRG
ZBTB14
RCE1
LRRC47
ZC3HC1
MRPL21
IGHMBP2
LAMTOR1
CTBP1
LCOR
OXNAD1
DPH3
TMEM242
CCNI
PES1
REXO4
TMEM167B
ZNF217
CSTF2
CNPY2
MELK
MAST2
LYPLAL1
GAB2
CCDC88A
AP3S2
CBX6
C19orf48
NDUFB3
MED23
FAM126B
GTF2H3
EIF2B1
EXOSC5
BCKDHA
PRSS22
CD55
CCAR2
SUGCT
MPLKIP
ZNF609
DIABLO
PTBP3
RWDD1
MAPKAPK5
MLLT10
RBM19
NDUFS3
KBTBD4
COLEC11
MRFAP1
REXO1
PMPCB
SPPL3
ERGIC2
NSA2
GFM2
ELAPOR2
CMIP
MED1
EIF4H
OBSL1
INHA
PKNOX1
PNO1
SGO1
PTP4A3
AUTS2
ARMC8
PTCD3
POLR1A
CFAP36
TEFM
C12orf66
SEMA5B
LIFR
COPS4
RBM14-RBM4
RBM14
GNB1
TIPARP
TAGLN2
BHLHB9
TCERG1
PPP2R5A
PVALEF
KMT5C
AATK
SNRPC
MTIF2
ERCC6L2
THAP1
ALKBH3
STAT5B
RYK
PARD6B
GTF2A1
SLX4IP
POMZP3
CRKL
SMURF1
ZNF292
TXNL4B
PPP2R3B
DHX38
ARPC2
MED20
BYSL
SRSF6
IQCG
YTHDF2
FANCD2
COMMD8
EVPLL
ATOH7
FEZ1
NFE2
ALG14
AMOTL1
GSDMD
TMEM266
MRPS33
VILL
MRPL40
HIRA
FBXL5
COLEC12
RABEP1
P4HB
ATG9A
ANKZF1
BRWD1
SGTA
MRPL27
EME1
DOHH
RALGPS2
ELP5
CTDNEP1
NF2
HHAT
MRPL53
CACYBP
C3orf70
AMMECR1
MCM7
AP4M1
NCAPH2
LMF2
SNX19
ARRDC3
BTBD3
TJP3
DUS2
DDX28
KLF16
SYT12
SLPI
TOR1AIP1
AVEN
NEK6
TM9SF4
BRF2
NXT2
ZNF451
SLC6A6
OPA1
MTF2
ADARB1
TRAPPC2L
TCTA
RPS7
RHOA
GALNS
SREK1IP1
CWC27
KIAA1586
EXOC6
PIK3C2B
SNX12
PLSCR1
MED6
ZRANB2
PIK3R3
CAPS2
PPP1R37
SIAH1
RNFT1
DUS3L
RBM28
MAGOH
NUDT5
GTPBP4