ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976674 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◣ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L8
MTRNR2L2
TMEM199
POLDIP2
GRB7
SLC45A4
ERAL1
C8orf33
RBBP8NL
RGPD2
RGPD1
UBE3B
MRPL45
SFSWAP
POLR2J3
SLC35B1
POLR3F
DZANK1
PSMD3
BHLHE40
GRHL2
MIEN1
PGAP3
ERBB2
CRBN
VIRMA
CLPTM1
C1orf174
POLR2J2
STARD3
RBM48
PEX1
TFPT
PRPF31
TSR3
GNPTG
HAGH
FAHD1
ISY1-RAB43
ISY1
POLR2J
TRMT1
STAT6
RBBP5
ATF3
LZTR1
PSMB7
RRP15
UBQLN1
LAMP1
UNC13D
C16orf91
LPCAT3
HES1
FLOT2
TSFM
GATB
MTBP
MRPL13
U2SURP
TET3
MTRNR2L9
TOMM22
THAP7
VPS50
HEPACAM2
VAC14
STX16
MRPS11
MRPL46
SKIL
SNRPE
PHAX
RAD51AP1
C12orf4
NDUFB3
FAM126B
ZNF576
IRGQ
SALL4
SOCS2
ZNF383
SMN2
SMN1
TBRG4
SLIRP
ALKBH1
ELP3
NDUFAB1
DMAC2
MRTO4
EMC1
NAGPA
IDH3B
NDUFA2
IK
TRMO
PFKM
SENP1
KRT80
HEXA
ITFG2
DNAJC11
YAP1
DDX46
SLC25A53
SAP30BP
RECQL5
SUPT6H
SDF2
SLC25A45
LSG1
MFSD3
SERP1
EIF2A
RPS26
ZSCAN25
TRIB1
UBE2I
SUMF1
RAB3IP
DDX23
TTC31
CCDC142
ZNF17
DDX41
SRI
TJP2
CHMP7
C19orf48
FAIM
BRIX1
ZNF3
TRAF4
ZZZ3
GABRR1
POMZP3
CDKAL1
DIABLO
SUPT7L
SLC4A1AP
ZBTB45
MOCS3
DPM1
ATG14
SUPV3L1
REEP4
TIMM22
TOP3A
SMCR8
LMAN2
DENR
STYXL1
PCNP
HUS1
MED20
BYSL
DOK7
MTO1
GET3
EIF3F
METTL2A
CASC3
SPHK2
RPL18
TBL1X
METTL2B
POLR1H
ATAD2
DPP3
ZNF524
FIZ1
ZGPAT
ARFRP1
PSME3
TFAP2C
PPWD1
CENPK
TTI1
RPRD1B
PRR3
GNL1
MAPKAPK5
PSMD1
EIF3H
FAM133B
KAT5
ATP5MF-PTCD1
ATP5MF
FSCN1
PHF3
VPS33A
DNAJC30
BUD23
ZNF830
CCT6B
GCN1
TIMM50
ZC3HC1
CCDC97
RPL26L1
CCDC59
ZSCAN22
GFM1
SH2B1
DLC1
TUFM
RAE1
WASHC5
NSMCE2
KRR1
NGDN
GTF3C5
GTPBP4
NEURL2
CTSA
HEMK1
MIEF1
RCE1
CDK5RAP2
RXRA
NFKBIA
ATP6V0D1
PNO1
MTX1
NUP214
NVL
DGAT2
MUL1
USP30
TXN2
SMG7
ECH1
ZNF2
TMEM208
LRRC29
BMS1
ZNF165
AXL
BIRC3
RPS12
ZNF335
CDK12
PDCD6IP
RTEL1
QRICH1
ATG101
UPK3BL1
FOCAD
ZNF579
EIF1AD
BANF1
BRF2
CHRM3
MIDEAS
MACROD1
WDR53
FBXO45
COLEC11
TIPARP
ASB6
SKIDA1
LSM5
FCF1
AREL1
LMNA
HCAR2
MRPS34
EME2
TSN
MRPL1
MED6
TBL1XR1
URM1
RPL23A
GLCCI1
LANCL2
PSMG2
CEP76
ZCWPW1
MEPCE
PHB2
TAS1R1
NOL9
MAP3K7
TSR1
ZNF408
ARHGAP1
TRIP4
STX6
HSPBP1
SEC13
MDGA1
BLOC1S1
S100A2
GTF2H3
EIF2B1
EIF3E
MRPS22
RPL30
SPNS1
SEMA3B
PLAGL1
RBM42
MYL12B
USP39
KAT8
VPS11
BNIP1
ERGIC2
PDE12
PGGT1B
ATP6V1C1
DNAH5
RRNAD1
ISG20L2
UPK3BL2
UTP20
KCTD11
ADGRL1
PUS10
PEX13
EXOSC5
BCKDHA
RINT1
UBXN1
PBX2
NDUFB5
MRPL47
SYT12
TRMT2A
RANBP1
YJU2
PRSS22
NME1-NME2
NME1
PAXBP1
MRPS7
GGA3
EIF5A2
SF3B3
COG4
COPS7B
TBC1D17
AKT1S1
ANXA3
EBPL
COG2
NUDCD3
OAZ3
MRPL9
ZFP64
FIS1
MED4
ERLIN2
SEMA4B
FOXA2
SEMA3F
MRPS15
COASY
TJAP1
MBD6
LRFN4
PES1
SETD3
CCNK
POLR3B
NDUFA10
ZCCHC4
MAD2L1BP
COQ8B
GTPBP2
TTC32
SSNA1
ANAPC2
PPP1R37
HR
YIPF3
POLR1C
GPATCH3
ZRANB2
ANAPC5
TNFRSF12A
EVPLL
FAM162A
CCDC58
AURKAIP1
ABCB8
FEM1A
C5orf51
SLC25A11
RNF167
CNPY2
RBM19
IPO11
SYT1
KMT2A
CLPB
SNRPB
CD63
LARP1
VGLL4
PIK3C2B
MRPL48
TMEM123
PMPCA
ENTR1
SBNO1
HTRA2
SETD1A
NCBP2AS2
NCBP2
SLX4IP
NUDT5
CDC123
PHF5A
ACO2
ISG20
ASH2L
GJB7
LIMA1
RPS14
TBL3
TCERG1
CDC23
DHRS13
RWDD1
TXNL4B
DHX38
CWC25
TMCO1
PPIL3
NIF3L1
MRPL10
LRRC46
MRPL21
IGHMBP2
RASEF
RTF2
CCNT1
INTS1
BIRC2
SNRPB2
PNMT
PTP4A1
RBX1
CDK5RAP1
ADPRS
COX16
SART3
ISCU
MED1
TAGLN2
TPRKB
DHRS3
KPTN
DDX49
COPE
SEMA6A
PWP1
FAM83A
RPS11
AP5Z1
FLOT1
TMEM203
NDOR1
ACP3
CDK11A
DNTTIP2
CTTN
CWF19L2
MCC
MTHFR
CLCN6
NUP107
SEPTIN9
CSTF1
AURKA
TSC1
GFI1B
DUS2
DDX28
GRK7
TAF6
CNPY4
EIF2S1
ATP6V1D
KMT2D
GRWD1
PDAP1
BUD31
UCKL1
MRPS26
NPAS1
PTPN12
UPK3B
TMEM41A
MAF1
PEPD
ZMAT2
WDR70
LONRF3
PSMD5
METTL1
EEF1AKMT3
LRRC23
MRPL40
HIRA
TGIF1
GTF3C3
MB
NDUFA9
AKAP3
NR1H2
PCID2
CUL4A
LGALS8
BCL3
UROS
BCCIP
SRD5A1
ENOSF1
KMT5C
PARP4
DYNC2I2
SNRPD2
QPCTL
FAAP20
LIF
ADPGK
FADD
ERCC5
RAB5IF
EPS8
LTO1
UTP3
STK36
RNF25
TTC6
FOXA1
PFDN1
TBCB
POLR2I
ARL8B
C6orf226
MCM7
AP4M1
PIGO
EIF3D
CCDC43
SSBP1
XAB2
GTF2H2C
GSN
GTF2H2
SLC7A6OS
PRMT7
SF3A3
GPRC5A
MAN2C1
TPD52L2
PSMC3
JADE2
TRMT112
PRDX5
MED23
AAR2
METTL7A
DPP8
DHX8
TMPRSS4
ZNF292
GUCA2A
COMMD5
WDR46
PFDN6
ZNF302
CWF19L1
TIPIN
PFDN4
UNC50
COA5
RBM22
SREK1IP1
CWC27
PRR12
C15orf62
SMG5
XPC
LSM3
SPRYD4
PPAN-P2RY11
PPAN
TBC1D23
SSH3
SLC24A1
INTS14
PPFIBP2
CCZ1B
ZG16B
RNF19A
ANKRD22
EIF3K
NDUFA4
SH2D4A
FOS
PKP2
RPS21
TGFB1
ARFGEF2
TINAGL1
RNF39
SNRNP70
RNF40
CCDC189
ZNF384
MEGF8
IGSF9
ZNF561
SPDYE14
SPDYE10P
MITD1
HMGA1
SNRPD3
GUCD1
SYNCRIP
ALDH18A1
HNRNPA2B1
CBX3
GET4
SLC39A10
EPC2
WDTC1
DDX17
EIF4G2
NUDT3
STRBP
SLC25A25
NAIF1
GABARAP
SEPTIN7
WASHC2A
WASF2
WASHC2C
UBE2Q1
GPR137
BAD
CDK4
GSK3B
RSF1
AAMDC
MSMO1
RPGRIP1L
FTO
DAGLA
MDM2
CUTA
CLCN7
SMARCD2
USP49
DDX42
CCDC47
SRSF1
RPUSD4
FAM118B
GBA
ILF3
SERPINI1
PDCD10
COMMD9
MAN1B1
ATP6V1G1
FAM72C
SRGAP2B
FAM72D
OSGEP
APEX1
SLC35A5
ATG3
UVRAG
MCOLN1
FANCA
RAD9A
SRGAP2
FAM72A
XPO7
CLN3
HPS5
GTF2H1
INO80C
MFSD1
PPP6R1
SLC4A2
DVL2
PCIF1
CEP162
UBE3C
ZDHHC6
VTI1A
AMDHD2
EIF2D
ARHGAP32
WWOX
PMS1
ORMDL1
MEF2C
MEMO1
PTBP1
UBE2B
CDKL3
PIP4P1
CLSTN1
ZNF668
GP1BB
INTS10
SH3GL1
SUMO3
WBP2
E2F6
ANKS6
UBAP2L
C1orf43
ADGRB3
MOB1B
MIER1
DAZAP1
SHLD2
GLUD1
HNRNPH2
SUSD4
ST7
TNC
KANSL3
SLK
SRGAP2C
KCNMA1
FAM72B
FGGY
SUMO2
TPP1
ALG6
HM13
SCAMP5
WDR62
THAP8
OTUD7A
THRAP3
XRCC5
SLC33A1
ADAM23
SPATC1L
RPTOR
TBC1D30
GNS
SMARCA4
TMEM116
ERP29
ITGB3BP
EFCAB7
CACTIN
STAU2
RABGAP1L
RALGDS
BLOC1S4
PPP5D1
CALM3
MYCL
PRMT3
ACVR1B
DICER1
BAX
DUSP6
ZNF497
SBK1
NSD1
KDM3A
TRUB2
COQ4
NPEPPS
SCYL3
RMND1
ARMT1
ARID5B
TNPO3
KDM1A
AP2A2
KDM7A
TFDP1
VWA7
NOL8
CENPP
GRHL1
FLYWCH1
TMEM18
NOP16
HIGD2A
PEAK1
HMG20A
HDAC6
CBX7
STRA6
SAP30
PRKCA
NEXN
DIP2A
UBE2E2
BAG6
SFXN1
RRAGC
KDM4C
FASN
NDUFS7
SMG8
SPTAN1
ATP6V1H
PRAME
LUC7L2
TMEM59
TM2D2
ADAM9
NUF2
HOOK2
CHD7
ZNF507
TMEM40
BRPF1
PLEKHF2
HOXC13
MINDY2
FBXL3
DNPEP
CAPRIN2
C17orf58
MAN2A2
CHIC2
CACNA2D2
NFU1
USP28
PHF21A
MYL12A
ACTN4
KDSR
WWP1
AAAS
RNASEK
BACH2
FMC1-LUC7L2
FMC1
PATZ1
JMJD1C
CFAP206
NAPA
IKZF2
AIFM1
KMT5B
DTNB
CENPBD1
MAZ
IGF1R
KLHL12
USF2
RFX1
SYT7
CUTC
COX15
THAP6
GTF2H4
UBE2L3
PHIP
PRKCE
WBP1L
ATXN7L3
FAM222B
ADCY9
VPS52
RPS18
UBXN2A
PRPF6
CHD1
LASP1
ETV4
PTK2
ATXN7L2
RBPJ
MSS51
PXT1
KCTD20
FCHSD2
AFF4
RPL5
COMMD2
CABIN1
IFT140
CRAMP1
NFASC
CCDC174
SPRTN
EXOC8
IRF2BP2
BSG
MAP3K1
EFNA3
HSPA9
MARCHF2
C1QTNF1
COMMD4
RBKS
BABAM2
PSMA1
FRMPD1
EIF4A2
LYPLA1
FAM98B
DNAJB12
ABT1
OAZ1
FZR1
TAOK1
GOLGA3
MAPKAPK3
KLHL32
GFER
SCAF11
UPF1
GOSR2
ZMPSTE24
PTPRG
ZBTB14
LRRC47
LAMTOR1
CTBP1
TRIQK
LCOR
OXNAD1
DPH3
TMEM242
CCNI
REXO4
TMEM167B
ZNF217
CSTF2
MELK
MAST2
LYPLAL1
GAB2
CCDC88A
AP3S2
CBX6
CD55
CCAR2
SUGCT
MPLKIP
ZNF609
KAT6A
PTBP3
ZBTB18
MLLT10
NDUFS3
KBTBD4
MRFAP1
REXO1
PMPCB
SPPL3
NSA2
GFM2
ELAPOR2
CMIP
EIF4H
OBSL1
INHA
PKNOX1
SGO1
WDR74
PTP4A3
AUTS2
ARMC8
PTCD3
POLR1A
CFAP36
TEFM
C12orf66
SEMA5B
LIFR
COPS4
RBM14-RBM4
RBM14
GNB1
BHLHB9
PPP2R5A
PVALEF
AATK
SNRPC
MTIF2
ERCC6L2
ULK4
THAP1
HERC5
ALKBH3
STAT5B
RYK