ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HDAC3 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◣ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
ARID3B
DUX4
MTRNR2L8
MYEOV
MTRNR2L1
MTRNR2L2
MSH3
DHFR
HEXA
GABARAP
ERBB2
PDXK
PNMT
PHF23
DVL2
MIEN1
ALDH18A1
GRB7
LAMP1
HNRNPA2B1
CBX3
GET4
SLC39A10
ELP5
CTDNEP1
EPC2
WDTC1
AP5Z1
SLC45A4
DDX17
EIF4G2
NUDT3
STRBP
BHLHE40
SLC25A25
NAIF1
TES
SEPTIN7
TMEM199
SEBOX
POLDIP2
WASHC2A
RNASEH2C
KAT5
KIF5C
WASF2
TCAP
ART1
MRPL45
WASHC2C
HAGH
FAHD1
ERAL1
UBE2Q1
CHRNB2
SPATA25
NEURL2
CTSA
ERCC1
SSH3
POLR2J3
IRS2
KCNK4
GPR137
BAD
TSPAN31
MARCHF9
CDK4
ID1
SFSWAP
SERPIND1
GSK3B
ZSWIM1
PGAP3
UVRAG
ATP6V0D1
AGRP
DHRS3
NAGPA
TET3
RSF1
AAMDC
CD300LF
SPNS1
LAT
MSMO1
FRG2C
CRBN
RPGRIP1L
FTO
RGPD2
RGPD1
UBE3B
DAGLA
TRMO
RALGDS
GRHL2
RBBP8NL
RBM48
PEX1
MTBP
MRPL13
SEPTIN9
BCL3
ASB2
PSMD3
SUPT7L
SLC4A1AP
MDM2
PTPRF
LTBP2
RPS6KC1
TXNRD1
SKIL
SUMF1
EFNA3
RAE1
MTRNR2L3
WBP2
MTHFR
CLCN6
ATF3
SLC35B1
LY6L
SYNGAP1
PHF1
CUTA
NECTIN4
ZBTB7B
LENEP
IL1R1
ZZZ3
SPIDR
MED11
CLCN7
HES1
SMARCD2
FRG2
USP49
TOMM22
SCHIP1
C1orf174
DDX42
CCDC47
SRSF1
RPUSD4
FAM118B
C8orf33
GBA
ILF3
RIOK2
TNS3
STARD3
PPP1R1B
MEOX1
TRIB1
SPTAN1
ISY1-RAB43
ISY1
POLR3F
DZANK1
SERPINI1
PDCD10
PRR5L
COMMD9
RBBP5
HOOK2
SOCS2
RAPGEF3
RXRA
ABCC10
ELF3
CDKN1A
UAP1L1
MAN1B1
GPRC5A
UBE2H
TOX2
STX16
LZTR1
STAT6
TSR3
GNPTG
ATP6V1G1
MACC1
MAMDC2
THAP7
ANGPTL4
POLR2J2
VPS50
HEPACAM2
UNC13D
TRIOBP
CD55
LIMA1
NOL4L
ATG16L2
GADD45A
RHOBTB2
VPS33A
DYNLRB1
APOBEC3B
POLR2J
ESRP2
UNKL
FAM72C
FOXJ1
IRF2BP2
PIP4P1
OSGEP
AVEN
APEX1
SRGAP2B
FAM72D
SQSTM1
ZNF335
SLC35A5
ATG3
ATAD2
RARB
TRIM29
TBL1X
TMC7
TRMT2A
RANBP1
MUC3A
FLOT2
DHRS13
CCDC59
EN2
PGLYRP4
SKIDA1
ZNF358
MCOLN1
FANCA
NOXO1
INO80C
PSMB7
GET3
CLPTM1
APOC2
PCIF1
AURKAIP1
SUPV3L1
SUPT6H
SMYD1
SDF2
MYCL
CYP27C1
GSR
MOCS3
DPM1
SNRPE
PPCDC
TFPT
PRPF31
DMAC2
ANXA2
CARD16
RIPOR3
IDH3B
RPS26
SLC25A11
RNF167
PFN1
PISD
RAD9A
PPP1CA
TRA2B
DAZAP1
PDGFB
RDH5
ITGA7
BLOC1S1
SPINK1
SMN2
SMN1
FCGR1A
LGALS8
REN
ERICH4
YJU2
IRF2BPL
NUP214
PURB
MRTO4
EMC1
SRGAP2
FAM72A
TBRG4
WASHC5
NSMCE2
SPIRE2
LYPD6B
VIRMA
PHRF1
BCKDK
FXYD3
ZNF408
ARHGAP1
ELFN2
C5orf51
SALL4
RGS3
XPO7
DOK2
UPP1
KMT2E
CLN3
APOBR
TRAF4
HPS5
GTF2H1
BRF1
SRI
PDZK1IP1
TPP1
TAF10
PDAP1
BUD31
SLC25A53
FAM199X
TBL2
TSFM
TOP3A
SMCR8
SENP1
PFKM
ARID3A
TMEM205
RAB3D
CCDC159
LOC102724770
DGCR6
YAP1
CYP2A13
ZBTB7C
ZNF789
ATP5MF-PTCD1
ATP5MF
CDKAL1
PRICKLE1
MIER1
DNAI4
MRPS7
MIF4GD
GLTP
GGA3
OSER1
SLC25A45
FRMD8
RMND5B
ENTPD4
MFSD1
PPP6R1
ITGB5
ZNF165
SAP30BP
RECQL5
OR1F12
LAMA3
CASC3
RDX
PTK2
NME1-NME2
NME1
DOK7
UXS1
SLC4A2
CDK5
C8orf74
GFM1
SLC27A5
SLIRP
ALKBH1
PAXBP1
TRMT1
NACC1
INMT
ASIC3
SHLD2
GLUD1
CELA3B
C16orf91
ZSCAN22
CORO7-PAM16
CORO7
RARG
EAPP
TXN2
MMP13
U2SURP
GPR182
CEP162
ZNF585B
ZNF383
IER3
FLOT1
WSB2
HUS1
UBE3C
SRP9
ZDHHC6
VTI1A
ATP6V0C
AMDHD2
ST7
EIF2D
CDK12
PRKAG2
MINDY4
FZR1
PTBP1
OPN1MW3
OPN1MW2
OPN1MW
ARHGAP32
TJP2
TAS1R1
NOL9
MB
WWOX
KAT8
GP1BA
AXL
ZSCAN25
TBC1D30
GNS
CCDC88B
TRIP4
PCLAF
MYLK2
BCL2L13
DENND2B
BIRC2
PMS1
ORMDL1
TMCO6
NDUFA2
IK
MTRNR2L9
KALRN
ZBTB45
SMG7
PLAGL1
STAU2
GATB
ANXA10
FGGY
KRT1
MLLT10
MEF2C
HERC3
DIP2A
SPAG16
ITFG2
MEMO1
SSUH2
TM2D2
MRPS15
MED1
ADAM9
FAM83A
GTPBP6
PMF1-BGLAP
PMF1
KRR1
KLF9
SUSD4
ANKS6
SUMO3
UBE2B
CDKL3
KIF25
RHEBL1
PNP
OSBPL2
JUNB
ERAP1
TRIM16L
RTF2
DOHH
CLSTN1
DOK3
DDX41
FNTA
DNAJC11
PXN
JMJD7-PLA2G4B
JMJD7
RBPJ
NUP107
ZNF668
ZNF646
VAC14
SEPTIN5
GP1BB
INTS10
TMEM40
TJAP1
SH3GL1
DICER1
DERL3
CHAF1A
TEX28
SLC35F6
PSME3
BECN1
OAZ1
KLF6
SLC16A5
KLF10
E2F6
ZMYND8
EPHB3
NDUFA4
SPRED2
PHAX
ALDH7A1
ZNF576
IRGQ
GRAMD2B
CCNT1
ARID2
ATG9B
ABCB8
FRMPD1
RPS5
LANCL2
KRT31
SPHK2
ECH1
FSCN1
LRRC47
ACVR1B
UBAP2L
C1orf43
SEMA3B
LSMEM2
SSBP1
ADGRB3
PTPRR
TIPARP
RNF223
MOB1B
CCDC97
PSMA1
THOP1
SGTA
COL23A1
TGFB2
GAMT
CALML5
ARID5B
RAD51AP1
C12orf4
TNNC2
RRP15
RGS20
PLEC
UBE2I
HNRNPH2
CRYAA2
CRYAA
RHCE
TNC
PMEPA1
KANSL3
FER1L5
SLK
CSRNP1
SRGAP2C
KCNMA1
FAM72B
PTPN6
C12orf57
TMEM262
STX1A
UBAP1
SUMO2
NGDN
BANP
ALG6
THEMIS2
PARD6B
HM13
SULT2A1
FASN
SCAMP5
BSG
ADAMTS14
PPWD1
CENPK
UBQLN1
KDM7A
WDR62
THAP8
OTUD7A
SSH1
OSBPL7
MRPL10
LRRC46
LRFN4
PLA2G4B
BUB1B
ETV4
THRAP3
VGLL4
USP30
XRCC5
VASH2
MRFAP1L1
BLOC1S4
SLC33A1
CMIP
BIRC3
ADAM23
NGB
SCRN2
NAPB
PYURF
PIGY
EPS8
C19orf33
NEK6
ADARB1
GRAMD1C
PDCD6IP
SPATC1L
RPTOR
RABGAP1L
HNRNPF
KYAT1
STX6
GPATCH3
SMARCA4
TMEM63A
SF3A3
TACC1
SRCIN1
H2BW2
BAIAP2
HMOX1
RAB3IP
ATG14
SLCO4A1
LARP1
ZNF514
ZNF2
FLYWCH1
TMEM248
TSN
PSMD1
LNX1
TMEM116
ERP29
ADGRL1
VPS11
CRTC1
ITGB3BP
EFCAB7
CACTIN
ZNF865
ZNF524
IGLL5
FIZ1
NUGGC
ELP3
TGIF1
ARHGEF7
RNPEPL1
EIF5A2
DUSP28
ANKMY1
TMEM208
LRRC29
SLC6A9
DPH2
B4GALT2
ATP6V0B
DENR
PPP5D1
CALM3
SNX21
MYL12A
BNIP3L
GPN2
C5orf63
TBC1D2
HR
ATP6V1H
TANGO2
ARVCF
PRMT3
FOXO6
SEMA5B
FBXO46
PLD1
CPA1
RINL
STMN3
RTEL1
HEYL
REEP4
NKD2
DUSP6
NUDCD3
MAP3K7
MRPS11
MRPL46
KRT86
NFE2
BAX
BCAS1
KSR1
PEAK1
HMG20A
GRAMD1A
ECHDC1
ZNF497
A1BG
SBK1
FAIM
DNPEP
NSD1
NIBAN2
ZCCHC4
RPL18
FAM83E
ATP13A3
STRA6
GSN
KDM3A
QRICH1
SYNGR3
GFER
PLEKHG3
TRUB2
DBNDD2
COQ4
TCAF2
RPL23A
RAB34
PROCA1
MAFK
C1orf116
BTBD6
NPEPPS
RPS11
NDST1
OR9A4
OAZ3
MRPL9
SCYL3
RMND1
ARMT1
NCBP2AS2
NCBP2
ENO3
PSMD5
PPP1R15A
EIF3F
TNPO3
PPP1R11
TEX46
KDM1A
AP2A2
PHF19
PTP4A3
ATN1
PRKRIP1
TFDP1
FEM1A
DDX23
VWA7
RHOD
NOL8
CENPP
LPCAT3
HNF4A
RGS14
LMAN2
GRHL1
ARMCX5-GPRASP2
RELN
PUS10
PEX13
NDUFAB1
TMEM18
PPL
LYPLA1
EIF1AD
CST6
BANF1
PTPRH
POLD4
NOP16
HIGD2A
TMCC3
MTUS1
LFNG
ITPK1
GOLGA7B
DNAJC30
BUD23
METTL1
EEF1AKMT3
DDX46
CYP27B1
PRRT2
MAZ
PRSS22
HSPB1
DPP3
HDAC6
CBX7
NSD2
SAP30
BAHCC1
COL1A1
ATP6V1C1
ZHX2
STYXL1
RASEF
CA5A
ATP6V1E1
PRKCA
PHF21A
BMS1
NEXN
LSG1
ITM2C
LDHD
UBE2E2
CAPRIN2
C6orf47
BAG6
APOM
GSC2
SFXN1
UQCRHL
RRAGC
UPK3B
KDM4C
RARA
KDELR1
GRIN2D
NDUFS7
AP5S1
TMEM91
NR5A2
NAPA
SNAP29
SMG8
PI4KA
NVL
SEC13
LOC388282
METTL2A
EFHD2
DGAT2
EPB41L1
PRAME
SH2B1
RPL13A
LUC7L2
CXXC5
TMEM59
AFF4
SYNCRIP
RPLP0
GCN1
LURAP1L
KRT80
TIMM22
LTO1
ZNF608
TSC1
SERP1
GFI1B
EIF2A
COX16
CD109
STON2
MKLN1
NFKBIA
NUF2
BNIP1
ARID1A
DUSP2
ASTL
PPP1R37
MRPL1
PYCR2
AFAP1
TTC32
TPRN
TMEM203
RAB33A
NDOR1
CHD7
PDE3B
UBE2L3
GTF3C5
ZNF507
NXF3
SMIM41
BRPF1
TUFT1
CYP4X1
TMCC2
ATG101
PLEKHF2
HOXC13
MINDY2
FBXL3
ST6GALNAC1
PRR3
GNL1
LCA5
INTS1
SART3
ISCU
ZGPAT
C17orf58
ARFRP1
AGTPBP1
PLEKHH2
MAN2A2
CHIC2
MEIOSIN
ZNF830
CCT6B
WDR74
STX5
CACNA2D2
AMOTL1
UTP3
CHMP7
TTC17
NFU1
MARVELD1
MAN2C1
DRC7
SETD1A
ORAI3
USP28
SAMD10
PTCH1
PRPF6
OBSL1
BMP7
ACTN4
PSMG2
CEP76
RTN4
KDSR
NDUFB5
MRPL47
WWP1
SF3B3
COG4
NTRK1
INSRR
SSNA1
ANAPC2
AAAS
SYNPO
RNASEK
C17orf49
PLEKHA4
PAGR1
EIF3H
ALLC
WNK1
BCAR1
EPB41
TBC1D14
PIK3R3
BACH2
ATXN7L2
PHLDB2
SYBU
TCF24
IFIT1
FOS
FMC1-LUC7L2
FMC1
PATZ1
JMJD1C
CFAP206
RPS14
DNAH5
PPARGC1A
METTL27
TFAP2C
GNG4
IKZF2
FADD