ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930140 | RH-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◣ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L2
HEXA
MTRNR2L8
LAMP1
WASHC2A
WASHC2C
AP5Z1
NEURL2
CTSA
TNC
MSS51
ZNF668
CLCN7
WBP1L
ARID5B
C1QTNF1
AFAP1
KCNMA1
SUMF1
ZAR1L
BRCA2
GPSM1
KAT5
STRA6
C20orf141
TRMO
PVALEF
AATK
OR51T1
GFRA1
ATP6V0D1
COMMD9
SLC35A5
ATG3
CLN3
LTBP1
SULF1
FCRLA
GBA
TNNT1
FREM1
MYPN
GET4
SMYD1
CLIP1
FHL2
MYOG
DOK7
MUSTN1
FLCN
HDAC9
TBL1X
HAGH
FAHD1
B3GALT5
ARL14EP
MYBPC2
ZNF507
AMDHD2
HRCT1
PTPRD
TCF4
MFSD1
PAFAH2
SH2D7
NAGPA
BLOC1S1
RRAGC
SBK2
MAP3K7CL
SPNS1
SMARCD2
VPS33A
NDUFA4
HNRNPH2
KDSR
TBC1D9
MYLK4
BAX
RPS7
CREB5
ITGB3BP
EFCAB7
RASGRP3
RYR1
ANKRD13A
UBE2Q1
BLCAP
SYNPO2L
FLRT3
ANKRD1
RMND1
ARMT1
FAM200B
TMEM167B
CCN2
SLC44A1
ALK
HES1
UCHL5
RO60
KANSL3
AMPD3
INTS10
OPRD1
NAV2
SSBP1
KDM3A
S100A2
PPP6R1
CDK4
ACOT9
EYA1
MYL12A
SLC25A34
NPEPL1
SPATC1L
PTK6
MXRA7
CNN3
NAPA
TNNT2
G2E3
ZBTB18
ACVR1
VTA1
NMBR
SREBF1
RBPJ
MAST4
MINDY2
SEMA3D
MAPK10
INTS12
GSTCD
YARS1
S100PBP
MCOLN1
SSTR5
RGS12
CGGBP1
C3orf38
LRRC17
SYTL2
TLN2
USPL1
HMGB1
KANSL1
ZCCHC24
MYO18A
SNRPB2
ATP6V1C1
STYXL2
ZNF335
G6PC3
ABLIM1
ERI1
RPA3
SUPT7L
SLC4A1AP
KDM1A
NUDCD3
CCNG2
BCAT1
BTG2
PPIP5K2
GIN1
SYTL3
MTBP
MRPL13
ABHD2
KLHL12
TBC1D19
SERP1
EIF2A
MED18
IFNAR2
PPP1R3D
FAM217B
PBK
UTP3
COMMD4
SEM1
MAMSTR
DZIP3
CIP2A
ODF2L
HOXC13
SSBP2
TACR3
TDRP
TNPO3
CASD1
RAD9A
ST7
TNNC2
MTHFD2L
WRN
TANK
PURG
CEP162
VPS11
TMBIM4
SLF2
MDM2
VAMP5
NCAM1
CCNI
TRIM62
ASB18
FIP1L1
PROSER1
NHLRC3
ATP6V1H
CCDC174
COX7A2
PCBP2
RAP1B
MAP3K7
ANKRD12
NUP42
NOXO1
RRAS
PSMA5
RPUSD4
FAM118B
PIP4P1
THAP1
MTF2
AZIN1
CDC42EP3
SLC4A2
RRP15
MARCHF8
CDK5
RBM48
PEX1
DVL2
TPP1
ZNF32
CHMP2B
AFF1
WDR11
CRYAB
E2F6
CACYBP
GTF2B
CAND1
FITM1
UVRAG
MNAT1
RRN3
PPP4R3B
SMAD3
SPATA9
RHOBTB3
LRRC58
DARS1
TSPAN31
MUSK
PLEKHS1
GRN
DNTTIP2
DBF4B
SH2B1
MSL2
UBB
RXRG
STAT1
RBMS3
SF3A3
PIH1D2
NKAPD1
CHRNG
ARMC8
LOC389831
THAP10
LRRC49
WBP11
C12orf60
AP3S2
RPL22L1
FANCC
KCTD9
CDCA2
NFIA
VGLL3
PEX3
ADAT2
PPM1D
THUMPD3
SH2D3C
NAGLU
LFNG
POLR2M
PPCDC
DENND2A
RTKN
SH3BP4
TTC30A
TUBA1B
ATP6V1G1
CCDC146
N4BP2L2
PFDN4
MYL12B
KCNF1
KRTAP5-3
MTMR9
EXOSC8
OSGEP
APEX1
WASHC5
NSMCE2
INMT
PNPT1
TPM2
LOC100421372
HSPA14
CDNF
ERCC6L2
POMZP3
ZNF212
CCDC15
KYAT1
TP53RK
CDC7
HNRNPD
MATR3
MRPL44
PLEKHD1
RBBP5
TSR3
GNPTG
EPS8
TBC1D30
GNS
JMJD1C
ATP6V1E1
SELENOT
THADA
ZNF143
KLHL41
FREM2
VPS50
HEPACAM2
COX16
SLC35E2A
NUP205
ANKRD40
NKAP
SGIP1
STK36
RNF25
SLC25A26
ZNF644
STXBP5
MTMR14
MOB4
POLR3F
DZANK1
NUP107
C2orf49
TAMM41
OTUD7B
TMEM230
SCAF11
DAB2
ARHGAP24
HSD17B11
WASL
XRN1
COMMD2
SGO1
MC2R
HRC
KLHL7
INO80C
DCAF10
COMMD1
KRT80
FANCD2
CITED2
TRIM55
TMF1
ZNF397
SMARCE1
BEST3
ATP5F1E
MEF2C
NUF2
SETDB1
MTERF1
MMADHC
PUM3
KAT6A
SLC38A7
RHOJ
ZSCAN30
NKIRAS1
ARNT
SHPRH
WDPCP
MDH1
RPL15
TNFRSF19
ZNF684
PNRC2
NEXN
WARS2
TCTE3
ERMARD
FAM240C
EPM2A
HPS5
GTF2H1
RPL27
ARID1A
GPN1
CCDC121
FAF1
RTN4
KANSL1L
CRBN
ZNF830
CCT6B
TTC26
RAB5B
CFAP69
PCOTH
MIPEP
ZNF343
RESF1
MTFR2
ATP5MC1
CEP120
METTL15
KIF18A
ZMPSTE24
CCAR2
ATR
ICE2
ZBTB6
TBPL1
SLC38A2
NOTCH2
DDX5
CHMP7
ZNF292
CYCS
UBXN2B
C3orf14
EPHA3
TRMT5
SLC38A6
DMPK
MFN1
STX16
DMAC2
THAP6
EIF4A2
THOC1
CXXC5
NDE1
MARF1
DTNA
FDFT1
CCDC59
C5orf51
KRR1
PUS10
PEX13
PSIP1
TMCO1
CCNC
CPED1
PEX2
OGFRL1
NXT1
SUGT1
SEMA3A
INKA2
DDX20
LIMCH1
ELOVL6
TOMM5
IPP
HFM1
CDC37L1
MEF2A
TM9SF4
CALM2
HBS1L
LEMD3
KRIT1
ANKIB1
VAMP4
HSPB7
OPA1
ERLIN2
DMTF1
ZCWPW2
AZI2
PREPL
CAMKMT
ANKRD50
RFX3
ALG9
NBPF1
ZCCHC3
TRMT6
MCM8
SPAG8
OXNAD1
DPH3
RPS12
SHOC2
BBIP1
ZFAND5
HSPE1-MOB4
HSPE1
HSPD1
GNG11
GCLM
NUP54
CNOT2
NFIB
HOMEZ
BECN1
AP1AR
SERPINI1
PDCD10
MST1
ATG4C
TMBIM6
RAB11A
ZER1
RARB
ANKRD18B
MRPS23
HBP1
CFLAR
SLC35A1
ZNF780A
SERBP1
NME1-NME2
NME1
SLC33A1
TYW3
CRYZ
CCN1
GMNN
PDAP1
BUD31
FAM98B
ELAPOR2
PHF5A
ACO2
COMMD3-BMI1
COMMD3
DHX8
LARS2
SCN3B
FRA10AC1
HIPK1
ACHE
PACRGL
RBMS1
UFM1
ADGRL2
STARD4
MAP3K13
SLC24A1
INTS14
COPS4
FZD1
RPL21
MTRF1L
ZCRB1
PPHLN1
SULF2
MYCBP2
PTPN1
RPL5
CBWD5
CLDN12
HNRNPDL
CTNNAL1
APBB2
ETV4
NRAS
TAF13
ALLC
ING3
COX10
MAGI3
DUSP6
AIFM1
ZRANB2
NDUFV2
PPIG
PLEKHM3
PARP2
NDUFAF5
ESF1
DGLUCY
NEMF
GPATCH8
RPS6KA5
THAP5
DNAJB9
STARD3NL
SMG8
CSDE1
DLAT
ANO6
EMSY
TRIM45
LDHB
PSMC2
MTHFR
CLCN6
YTHDF2
STAG1
SCNM1
LYSMD1
RIN2
SLC35D1
NUDCD1
SLC9B2
TFPT
PRPF31
TOP3A
SMCR8
PCNP
CCDC77
KDM5A
AGBL3
NAA38
USP15
HACL1
BTD
ATP2A1
CCDC169-SOHLH2
CCDC169
CRNKL1
CFAP61
FOXJ3
MKRN2
GTF2A1
PLSCR1
SNIP1
EIF2AK3
CCDC43
SECISBP2
DPH5
DNAJC24
DCDC1
TSEN15
PLS3
ZNF780B
PIGK
CBLB
PIGF
CRIPT
HUS1
CBWD3
CBWD6
RNF6
PPP1R8
CTH
EHBP1
TTLL4
MRPL1
MTIF2
PRDX6
KDM8
CCDC7
PRKACB
INTS9
HMBOX1
DBT
SRRM1
TAF7
ZNF112
BRIP1
PNO1
TEFM
POMP
ZNF226
HMHB1
PTCD3
POLR1A
SCAND1
MRPS31
RBM7
C11orf71
GNAI1
METTL7B
SLC2A12
CAVIN2
WWP2
TUT4
SLIRP
ALKBH1
GINS1
GSTA4
PGS1
RNF103-CHMP3
RMND5A
RHOT2
CDK6
ERLIN1
WNT2B
USP16
RBM12
PAPOLG
CPNE1
AGPAT4
OAZ3
MRPL9
SUGCT
MPLKIP
CDK11A
RPS29
CCAR1
RPL24
POLI
TTC23
LRRC28
RNF20
RAPH1
BMT2
USP30
UBXN4
RPS3A
RTTN
GBE1
SAV1
RAB32
NOTCH2NLA
TRMT10C
SVOP
KRCC1
NCOA5
ETAA1
POLR2K
VPS45
MCL1
CLUAP1
TAF1A
OSBPL1A
CEP128
ZC3HC1
TMEM242
UTP23
DNAJC19
LRIG3
ZBTB40
TMA16
HELB
CTNNB1
GAR1
KIFAP3
MTREX
DHX29
SRBD1
GOLPH3L
CYB5R4
SLC10A7
FBXO4
MED4
VPS26C
WDR77
ATP5PB
SRSF2
MFSD11
GPRC5A
SEC31A
THAP9
TRMT61B
NCAPG
BAZ2A
LSM8
C2orf73
PLK2
MXD1
SP2
SMIM12
CCDC138
DYNC2LI1
MIB1
MYL4
NDC80
METTL4
PGM5
RFC3
SMAP1
CSTF2T
DYRK2
RPL11
USP42
FAM3C
PPIH
PRPF38B
RLF
EYA4
FAM133B
TOR1AIP1
PRKAG2
OSBPL7
TNKS
CHD8
RBM22
CENPE
OSER1
CBR3
PHIP
PNISR
SLC25A32
DCAF13
TMEM209
APBA1
SCRN3
CIR1
ZC3H15
FAM171B
PPM1B
SMCHD1
FRS2
UGP2
MKLN1
ZNF586
CEP350
PSMD14
PSMA2
MRPL32
CADM2
SPOPL
SCYL3
TMEM101
SSX2IP
NUP35
PHYHD1
CBX2
RTL8B
VIRMA
ROCK2
RSRC1
PROS1
NBEAL1
RPL37
CDCA7L
EXOC4
CEP70
RXYLT1
SUPT20H
HERC5
ABCD3
ITPRID2
DERA
ZCCHC17
SNRNP40
FAM126A
MITD1
RPAP2
GLMN
TIPARP
PRRC2C
ZZZ3
ALDH18A1
GRB7
HNRNPA2B1
CBX3
SLC39A10
EPC2
WDTC1
SLC45A4
DDX17
EIF4G2
NUDT3
STRBP
SLC25A25
NAIF1
GABARAP
SEPTIN7
TMEM199
POLDIP2
WASF2
MRPL45
ERAL1
GPR137
BAD
POLR2J3
SFSWAP
GSK3B
RSF1
AAMDC
MSMO1
RPGRIP1L
FTO
RGPD2
RGPD1
UBE3B
RBBP8NL
DAGLA
GRHL2
PSMD3
SKIL
RAE1
SLC35B1
CUTA
USP49
TOMM22
C1orf174
DDX42
CCDC47
SRSF1
C8orf33
ILF3
STARD3
TRIB1
ISY1-RAB43
ISY1
SOCS2
MAN1B1
LZTR1
STAT6
THAP7
UNC13D
BHLHE40
FAM72C
SRGAP2B
FAM72D
MIEN1
PGAP3
ERBB2
TRMT2A
RANBP1
FANCA
PSMB7
POLR2J
CLPTM1
AURKAIP1
SUPV3L1
SUPT6H
SDF2
SNRPE
IDH3B
RPS26
SMN2
SMN1
YJU2
NUP214
SRGAP2
FAM72A
TBRG4
MOCS3
DPM1
TET3
POLR2J2
ZNF408
ARHGAP1
ATF3
SALL4
XPO7
MRTO4
EMC1
SRI
SLC25A53
TSFM
GET3
PFKM
YAP1
CDKAL1
SLC25A45
ZNF165
SAP30BP
RECQL5
CASC3
ATP5MF-PTCD1
ATP5MF
PAXBP1
TRMT1
C16orf91
ZSCAN22
PCIF1
U2SURP
ZNF383
UBE3C
ZDHHC6
VTI1A
EIF2D
SENP1
CDK12
ARHGAP32
FLOT2
TAS1R1
NOL9
WWOX