ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976675 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◣ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L8
GRB7
SLC45A4
TMEM199
POLDIP2
MTRNR2L2
SFSWAP
ERAL1
STARD3
RBBP8NL
C8orf33
CRBN
UBE3B
TOMM22
NAGPA
VIRMA
STAT6
RBM48
PEX1
TSR3
GNPTG
GRHL2
C1orf174
SALL4
BHLHE40
TRIB1
SLC35B1
PSMB7
PSMD3
FLOT1
MRPL45
POLR3F
DZANK1
IDH3B
MIEN1
MOCS3
DPM1
RGPD2
RGPD1
LAMP1
PHAX
PFKM
SENP1
EIF5A2
EIF2D
SUPT6H
SDF2
YAP1
ATP5MF-PTCD1
ATP5MF
FLOT2
SOCS2
DNAJC11
SPNS1
THAP7
NEURL2
CTSA
POLR2J3
UNC13D
KAT8
GATB
TET3
SAP30BP
RECQL5
RTF2
GPRC5A
SEMA3B
PSMD1
MTBP
MRPL13
CCDC59
TRMT1
TFPT
PRPF31
HES1
PLAGL1
CDKAL1
VAC14
LZTR1
MRTO4
EMC1
FAM98B
ZNF335
ZZZ3
SKIL
SUMF1
POLR2J
CLPTM1
LANCL2
SLPI
SUPV3L1
ZBTB45
COASY
AAAS
ZNF383
SLIRP
ALKBH1
HAGH
FAHD1
CENPBD1
EPS8
SYT12
ISY1-RAB43
ISY1
UBE2I
RPTOR
SLC25A45
HEXA
FAIM
SRI
ATG14
LTO1
DMAC2
SMG7
SUPT7L
SLC4A1AP
REEP4
DPP8
PGAP3
ERBB2
ACP3
RBBP5
GET3
NGDN
SEPTIN9
SART3
ISCU
DDX41
ABT1
TRMO
NUP214
C16orf91
ZFYVE26
LAMA3
ATF3
TXN2
BIRC2
AXL
SLC25A53
TMEM41A
MTRNR2L9
SLX4IP
TGFA
RAD51AP1
C12orf4
TRAF4
ELP5
CTDNEP1
SMN2
SMN1
TRIQK
ZNF408
ARHGAP1
RRP15
PRPF6
RPS16
LSG1
E2F4
NDUFA2
IK
UPK3B
KRR1
LIMA1
FEM1A
ZCCHC4
PDAP1
BUD31
DHRS13
DGAT2
RPS26
GFM1
LRRC23
KMT5B
MTA3
KCNG3
RAE1
TOP3A
SMCR8
ZSCAN25
ATAD2
STX6
NCAPH2
LMF2
MRPL10
LRRC46
RCOR3
SERP1
EIF2A
VPS50
HEPACAM2
ZNF576
IRGQ
GTSF1L
BLOC1S1
MRPS7
GGA3
CACTIN
MRPL1
NFKBIZ
MRPS15
FAM83A
TSN
FAM133B
U2SURP
DDIT3
RTEL1
UBE2L3
GCN1
TRABD
SMIM6
WASHC5
NSMCE2
ZDHHC6
VTI1A
BIRC3
UQCC1
NVL
NCBP2AS2
NCBP2
SEMA5B
TMEM203
NDOR1
STX16
LRRC47
ATF6
RASSF6
TSFM
HABP2
POLR2J2
HSPBP1
KCTD5
KLK6
PHB2
MAPKAPK5
ANTKMT
FOS
NDUFA9
AKAP3
PLEC
LCN2
TMEM248
NUP155
RRNAD1
ISG20L2
ZSCAN22
TIGD5
EEF1D
INTS1
GRWD1
TAS1R1
NOL9
SSNA1
ANAPC2
REXO1
PNMT
PPARD
MYNN
RAB3IP
PRSS22
HUS1
ZNF2
SMG8
RPS14
NUDT5
CDC123
C5orf51
GSDMD
MAGOH
UPK3BL1
KMT2A
MLST8
CTNNA1
DNAJC30
BUD23
PPIL4
ARL14EPL
CCNT1
KRT80
DNAJB12
PKP2
LRP6
DDX46
PAXBP1
TMEM208
LRRC29
EIF3F
TIMM50
MRPL53
HNMT
ALKBH3
CPSF1
DOK7
PUS10
PEX13
BRPF1
DNAH5
DPP3
GTF3C5
PMPCB
CCDC124
TBRG4
CCDC97
TEFM
EFR3A
LRCH4
FBXO24
EFCAB14
MAP3K7
PDCD6IP
ORAI3
TTC32
SPINT2
SNRPC
MED24
SEC13
PEPD
LSM14B
NAALADL2
YJU2
UBQLN1
FANCD2
DPH7
CASC3
COPS7B
NUS1
HAX1
SLC31A1
FKBP15
ECH1
DHRS3
PRR3
GNL1
TRRAP
LIN52
ALDH6A1
TRMT2A
RANBP1
PSME3
GJB5
VPS52
RPS18
ZNF17
POMZP3
ING4
ZGPAT
ARFRP1
GTF2H4
MRPL27
EME1
CDC23
KPTN
USP30
OAZ3
MRPL9
TTC31
CCDC142
MCM7
AP4M1
SOD2
WTAP
ENO3
COA8
BAG5
CLCN7
MTIF2
TBC1D23
COQ5
KAT5
SF3B3
COG4
SERPINE1
VWA7
METTL2A
GOSR2
NSA2
GFM2
TAGLN2
MAF1
SYT1
C12orf73
TMA16
KRT13
TRIP4
PSMG2
CEP76
TXNL4B
DHX38
NDRG1
RABL2A
CCT8
TMEM18
CALM2
MCCC1
TIMM23
AURKAIP1
PPWD1
CENPK
ZNF497
LARP1
NOL8
CENPP
LRFN4
MAN2C1
SNRNP200
SPHK2
RPL18
METTL2B
FAM162A
CCDC58
SREK1IP1
CWC27
GINS1
STAM2
FBXL18
POU5F1
GPR39
PSMD12
METTL17
ERP27
MED20
BYSL
MRPS35
ATP6V1G1
ZNF165
FSCN1
MED1
SH2D4A
RFC4
DDX23
GABRR1
HSPA9
PRKG2
TMEM123
ZMAT2
TMEM230
KMT2D
GRK7
BBS10
CDK12
ITFG2
COX16
RNF223
VPS11
LGALS8
IFTAP
SNRPE
MRPS11
MRPL46
NFKBIA
RPL37
SENP2
MRPL38
DDX56
VARS1
TOMM70
LNP1
PLPP2
COMMD2
GOLGA3
CCAR2
PIGO
FCF1
AREL1
PRR15
TRIM56
SLC33A1
LEKR1
TACO1
XAB2
BCL3
ALDOA
PSENEN
CTDSP2
PIK3C2B
MAP2K3
NUDCD3
LEO1
MUL1
NOTCH2NLC
GTF2H3
EIF2B1
CHRM3
SRFBP1
SSBP1
ATP6V1H
HR
CLDN22
FMN1
UBE2Q1
NAPA
MB
BRIX1
ZKSCAN2
STK19
DXO
PROCA1
FOXK1
NUP107
URM1
IPO11
PHF5A
ACO2
TSC22D4
TRIM29
ZNF805
TMEM120A
NDUFAB1
CRKL
HEMK1
SKIDA1
CEP63
ANAPC13
RCE1
GLCCI1
GTF2IRD2B
TIMM9
KIAA0586
ABCB8
EIF2S1
ATP6V1D
SCAF11
TM9SF4
EMC4
SNIP1
FOCAD
ANAPC5
GGCX
ARHGAP32
ETV4
RAD52
COQ8B
TFAP2C
ADPGK
ARF3
IBA57
WDR53
FBXO45
REXO4
ARFGEF2
POLE3
C9orf43
SLC7A6OS
PRMT7
MRPL4
NDUFS3
KBTBD4
PHF3
ORC4
MBD5
FNTB
KLHL32
CCZ1B
JRK
NDUFAF4
CLCF1
RWDD1
TPGS1
NSFL1C
POP7
CCDC38
AMDHD1
TJP2
MRPS33
PARG
PDRG1
DDX49
COPE
OGG1
MPHOSPH10
MCEE
ALG10
GOSR1
SNRPD2
QPCTL
MAGEA3
COIL
LMAN2
FGD3
MUC20
ZSCAN21
RECQL4
LRRC14
NOP16
HIGD2A
TMEM40
ZNF623
MRPS34
EME2
PARL
XRCC6
DESI1
TPD52L2
TBCK
AIMP1
TINAGL1
RPS27A
CLHC1
EVPLL
TAF6
CNPY4
SART1
GID8
DIDO1
MRPL20
TMEM222
PLEKHG6
PPP6C
TNFAIP1
IFT20
NAMPT
CEP120
TMPRSS4
RNF139
DNTTIP2
FAM110A
UNC50
COA5
NMNAT1
LZIC
DNAH2
ANKRD36C
MAPKAPK3
CISH
MRM3
GLOD4
SENP5
CSTF1
AURKA
HACD2
MRPL3
MYORG
BNIP1
CTTN
MRPS18A
PA2G4
C15orf62
KIAA0100
ZNF3
NR1H2
RASEF
STYXL1
KAT6A
LMNA
ZNF16
TUBGCP6
ATP6V0D1
CDK5RAP2
SZRD1
TMED10
PRR12
LYRM4
FARS2
TBCB
POLR2I
TUBA1C
KMT5C
RABL2B
C6orf89
RBM27
FAM222B
TCERG1
NUP54
RFFL
ZNF302
PDE12
LZTS2
ANKRD36
MRPS26
ERBB3
IQCG
EXOSC3
RPL35A
ASB6
KCTD11
SRRD
HPS4
C12orf43
FADD
HIF3A
NDUFB5
MRPL47
ZNF256
MBOAT7
FAM149B1
ECD
TMEM234
EIF3I
ESRP1
METTL1
EEF1AKMT3
TTI1
RPRD1B
RPS21
WASHC2A
RNF224
TBCC
BICRAL
VGLL4
ZRANB2
LENG8
SNRPD3
GUCD1
RHOT2
FXR1
ZNF668
BBS1
RNF39
ZNF646
UPP1
DENND2D
SUGCT
MPLKIP
PROSER1
NHLRC3
ZNF629
RASA3
ARNTL
RPS29
LRR1
LAPTM5
EBPL
ZNF524
FIZ1
COMMD5
ZKSCAN4
KLHDC7A
RNF168
TRMT61A
ANAPC7
SCARB1
IARS1
ZNF543
ALDH18A1
HNRNPA2B1
CBX3
GET4
SLC39A10
EPC2
WDTC1
AP5Z1
DDX17
EIF4G2
NUDT3
STRBP
SLC25A25
NAIF1
GABARAP
SEPTIN7
WASF2
WASHC2C
GPR137
BAD
CDK4
GSK3B
RSF1
AAMDC
MSMO1
RPGRIP1L
FTO
DAGLA
MDM2
CUTA
SMARCD2
USP49
DDX42
CCDC47
SRSF1
RPUSD4
FAM118B
GBA
ILF3
SERPINI1
PDCD10
COMMD9
MTHFR
CLCN6
MAN1B1
VPS33A
FAM72C
SRGAP2B
FAM72D
OSGEP
APEX1
SLC35A5
ATG3
UVRAG
TBL1X
MCOLN1
FANCA
RAD9A
SRGAP2
FAM72A
XPO7
CLN3
HPS5
GTF2H1
INO80C
MFSD1
PPP6R1
NME1-NME2
NME1
SLC4A2
DVL2
PCIF1
CEP162
UBE3C
AMDHD2
WWOX
SLC25A11
RNF167
PMS1
ORMDL1
MEF2C
MEMO1
PTBP1
UBE2B
CDKL3
PIP4P1
CLSTN1
GP1BB
INTS10
SH3GL1
SUMO3
WBP2
E2F6
NDUFA4
ANKS6
UBAP2L
C1orf43
ADGRB3
MOB1B
MIER1
DAZAP1
SHLD2
GLUD1
HNRNPH2
SUSD4
ST7
TNC
KANSL3
SLK
SRGAP2C
KCNMA1
FAM72B
FGGY
SUMO2
TPP1
ALG6
HM13
SCAMP5
WDR62
THAP8
OTUD7A
THRAP3
XRCC5
ADAM23
SPATC1L
TBC1D30
GPATCH3
GNS
SMARCA4
TMEM116
ERP29
ADGRL1
ITGB3BP
EFCAB7
STAU2
RABGAP1L
ELP3
RALGDS
BLOC1S4
DENR
PPP5D1
CALM3
MYCL
PRMT3
ACVR1B
DICER1
BAX
DUSP6
RXRA
SBK1
NSD1
KDM3A
QRICH1
TRUB2
COQ4
NPEPPS
SCYL3
RMND1
ARMT1
ARID5B
PSMD5
TNPO3
KDM1A
AP2A2
SF3A3
KDM7A
TFDP1
LPCAT3
GRHL1
FLYWCH1
EIF1AD
BANF1
PEAK1
HMG20A
HDAC6
CBX7
STRA6
SAP30
ATP6V1C1
PRKCA
BMS1
NEXN
DIP2A
UBE2E2
BAG6
SFXN1
RRAGC
KDM4C
FASN
NDUFS7
SPTAN1
PRAME
SH2B1
RPS11
LUC7L2
TMEM59
SYNCRIP
TM2D2
ADAM9
TIMM22
NUF2
HOOK2
CHD7
ZNF507
ATG101
PLEKHF2
HOXC13
MINDY2
FBXL3
DNPEP
CAPRIN2
C17orf58
MAN2A2
CHIC2
ZNF830
CCT6B
CACNA2D2
CHMP7
NFU1
USP28
PHF21A
MYL12A
ACTN4
KDSR
WWP1
RNASEK
EIF3H
BACH2
FMC1-LUC7L2
FMC1
PATZ1
JMJD1C
CFAP206
IKZF2
AIFM1
DTNB
MAZ
IGF1R
KLHL12
USF2
RFX1
SYT7
CUTC
COX15
THAP6
PHIP
PRKCE
WBP1L
TBL3
S100A2
ATXN7L3
ADCY9
UBXN2A
CHD1
LASP1
UTP3
PTK2
ATXN7L2
ZCWPW1
MEPCE
RBPJ
MSS51
PXT1
KCTD20
FCHSD2
AFF4
RPL5
CABIN1