ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976676 | KYSE-410
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◣ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L8
GRB7
MTRNR2L2
SLC45A4
TMEM199
POLDIP2
SFSWAP
ERAL1
RBBP8NL
UBE3B
RBM48
PEX1
NAGPA
GRHL2
STARD3
TOMM22
VIRMA
TSR3
GNPTG
STAT6
C8orf33
CRBN
BHLHE40
TRIB1
C1orf174
FLOT1
MIEN1
POLR3F
DZANK1
SALL4
MOCS3
DPM1
LAMP1
YAP1
SLC35B1
PHAX
TET3
MRPL45
PSMD3
IDH3B
TRMT1
THAP7
MTBP
MRPL13
NEURL2
CTSA
KAT8
SUPT6H
SDF2
DNAJC11
SOCS2
UNC13D
PSMB7
SPNS1
ZZZ3
POLR2J
FLOT2
LZTR1
RGPD2
RGPD1
EIF5A2
SLIRP
ALKBH1
CLPTM1
POLR2J2
SAP30BP
RECQL5
VAC14
POLR2J3
EIF2D
HAGH
FAHD1
ZNF335
ATP5MF-PTCD1
ATP5MF
GATB
CCDC59
PFKM
SENP1
SMN2
SMN1
CDKAL1
MRTO4
EMC1
SEMA3B
SMG7
LANCL2
CENPBD1
RBBP5
PLAGL1
PGAP3
ERBB2
TMEM41A
SUPV3L1
ZBTB45
GET3
ZNF383
RTF2
SRI
FAIM
SLPI
PSMD1
DPP8
FAM98B
SKIL
AXL
ISY1-RAB43
ISY1
MRPS15
AAAS
ZSCAN22
REEP4
MTA3
KCNG3
TRAF4
SUMF1
ABT1
RRP15
COASY
C16orf91
DDX41
RAE1
HES1
UBE2I
TFPT
PRPF31
RPS16
RPTOR
HEXA
ATG14
SYT12
LAMA3
TXN2
LSG1
GPRC5A
SART3
ISCU
DMAC2
CACTIN
VPS50
HEPACAM2
NGDN
BIRC2
NUP214
ATAD2
KRR1
MRPL10
LRRC46
RCOR3
ATF3
STX6
DNAJC30
BUD23
SLC25A53
SEPTIN9
ZCCHC4
ZDHHC6
VTI1A
LTO1
ACP3
SLC25A45
LRRC23
SUPT7L
SLC4A1AP
TOP3A
SMCR8
ZFYVE26
CLDN22
STX16
PHB2
E2F4
DOK7
GFM1
WASHC5
NSMCE2
NDUFA2
IK
ZNF576
IRGQ
RAD51AP1
C12orf4
TRMO
U2SURP
SERP1
EIF2A
PRPF6
COPS7B
NCAPH2
LMF2
TSFM
NUDT5
CDC123
FOS
ZNF408
ARHGAP1
EPS8
SNRPC
SLX4IP
ELP5
CTDNEP1
UPK3B
FAM133B
RPS26
MTRNR2L9
TMEM208
LRRC29
KMT5B
DNAJB12
PRR3
GNL1
PRSS22
ECH1
SSNA1
ANAPC2
NUP155
PKP2
PDAP1
BUD31
PAXBP1
EIF4A2
CCNT1
FAM162A
CCDC58
TSN
DHRS13
TRIQK
TGFA
SEC13
NCBP2AS2
NCBP2
PDRG1
EIF3F
PUS10
PEX13
PPWD1
CENPK
TTC32
TMEM203
NDOR1
TMEM248
PLEC
MAP3K7
BLOC1S1
LIMA1
NVL
TRABD
TRRAP
GBA
MRPS7
GGA3
NFKBIZ
COQ5
ZSCAN25
GABRR1
GINS1
DGAT2
NFKBIA
HSPBP1
LRRC47
COLEC12
INO80D
BIRC3
GCN1
TBL1X
RTEL1
SPHK2
RPL18
SEMA5B
ANXA3
TBRG4
TRIP4
URM1
MAGOH
PHF5A
ACO2
SMIM6
CASC3
HUS1
UBQLN1
OAZ3
MRPL9
UBE2L3
LRP6
NDUFA9
AKAP3
DDIT3
MCM7
AP4M1
EFR3A
KCTD5
VPS11
ATF6
RRNAD1
ISG20L2
FEM1A
POMZP3
TXNL4B
DHX38
KLK6
SNRPE
KMT5C
FAM83A
PDCD6IP
FANCD2
NOL8
CENPP
MAPKAPK5
KPTN
RFC4
HNMT
SLC31A1
FKBP15
FSCN1
C2orf49
DPH7
TIMM50
GRK7
ALG10B
MLST8
ZNF2
SF3B3
COG4
GTF3C5
MRPL1
ELAPOR2
ORAI3
TIGD5
EEF1D
ANTKMT
PSENEN
TAS1R1
NOL9
MAN2C1
TEFM
HABP2
SERPINE1
COQ8B
KRT78
RPS14
INTS1
CPSF1
PELATON
ID1
MED24
KRT80
REXO1
PNMT
UQCC1
SMG8
CRKL
TNFAIP1
IFT20
CLCN7
METTL2A
RBM28
CDC23
POU5F1
CMTR2
DDX23
DPP3
DHRS3
PEPD
DNAJA3
GSDMD
MRPL27
EME1
MAF1
POLE3
C9orf43
GOLGA3
ENO3
C5orf51
HSPA9
NDRG1
LRCH4
FBXO24
TRMT2A
RANBP1
NME1-NME2
NME1
GLCCI1
ERP27
ATP6V1G1
KMT2A
MINK1
TMEM127
CIAO1
ENOSF1
PMPCB
GRWD1
NUS1
PSMD6
NUDCD3
DNAH5
GOSR2
NSA2
GFM2
MRPL53
LEKR1
PRR15
ACSL1
MBOAT7
LIN52
ALDH6A1
AMDHD2
PSMG2
CEP76
GTF2H4
ALKBH3
PHF3
PIGO
WDR24
SNIP1
MYNN
ANKRD36C
SPINT2
VWA7
RWDD1
SREK1IP1
CWC27
PIK3C2B
LSM14B
KLHL32
CDK5RAP2
NDUFAF4
ARL14EPL
TBC1D23
ING4
ITFG2
ZGPAT
ARFRP1
SCAF11
MED1
GJB5
LARP1
TMEM18
COMMD2
SNRNP200
MAP2K3
KAT5
GTF2IRD2B
SYT1
SCAND1
RABL2A
LMAN2
CEP63
ANAPC13
BCL3
PPIP5K2
GIN1
BBS10
EXOSC10
REXO4
DDX56
NR1D1
SSBP1
MRPS33
FCF1
AREL1
PPARD
ALG10
TMA16
HR
AURKAIP1
ZNF17
TTC31
CCDC142
CTDSP2
CSRNP1
TFAP2C
ETV4
TMEM242
TM9SF4
MRPS22
TRIM4
TMEM120A
PFDN1
USP30
NDUFAB1
LRFN4
TPD52L2
SOD2
WTAP
ALDOA
GPR39
DUSP6
RFFL
SLC7A6OS
PRMT7
PSMD12
XRCC6
DESI1
UPK3BL2
C12orf73
TMEM40
TAGLN2
FMN1
EIF1AD
BANF1
SKIDA1
ZNF629
PNKD
ADPGK
RNF223
FGD3
PROCA1
COA8
BAG5
NDUFB5
MRPL47
RCE1
MED20
BYSL
CEP162
NUP107
METTL2B
RPL37
RAD52
LEO1
UNC50
COA5
GTF2H3
EIF2B1
RBM19
TBCB
POLR2I
MTARC1
FAM222B
ZNF805
GLIS2
UBE2Q1
ZNF497
VPS52
RPS18
PROSER1
NHLRC3
TPGS1
SH2D4A
NBPF12
SF3A3
EIF2S1
ATP6V1D
IPO11
HAX1
VARS1
MB
TAF6
CNPY4
CCZ1B
MRPL38
PARL
TIMM23
HTRA2
IGFL4
TMPRSS4
MCCC1
ZNF623
TRIM56
MRPL20
NAPA
FAM110A
COMT
UBFD1
EARS2
XAB2
RHOT2
MRPL4
ABCB8
CSTF1
AURKA
WDR53
FBXO45
SETD3
CCNK
ATP6V1H
BRPF1
EVPLL
HEMK1
PARG
STAM2
JRK
TRIM29
TSSC4
RECQL4
LRRC14
RNF128
LGALS8
LENG8
KNTC1
TJP2
BNIP1
PPP6C
KLHDC7A
TOMM40L
RAB3IP
LMNA
CHRM3
ANAPC5
FBXL18
PLEKHG6
NMNAT1
LZIC
MRPS11
MRPL46
SH2B1
NDUFS3
KBTBD4
SART1
LYRM4
FARS2
NSFL1C
GFUS
PDE4DIP
FADD
GBP3
BRIX1
PES1
PDE12
RASEF
EXOSC3
CTTN
DNAH2
IVNS1ABP
SLC33A1
NOP16
HIGD2A
FBXO11
TACO1
PWP1
RNF139
SNF8
COIL
CCAR2
TINAGL1
ZKSCAN2
MPHOSPH10
MCEE
ZSCAN21
CDK11B
RPS21
UBXN1
NR1H2
RASA3
NAMPT
ZKSCAN4
LAPTM5
LCMT2
C6orf132
ADAL
KAT6A
MRM3
GLOD4
CLCF1
PSMD5
OPA1
ARFGEF2
SRRD
HPS4
GOSR1
DCUN1D5
STYXL1
TCERG1
SNRPD3
GUCD1
HIF3A
POLD1
PTP4A1
TBCK
AIMP1
ZNF3
PTCD3
POLR1A
DHX8
TMEM123
PA2G4
ARHGAP32
SUGCT
MPLKIP
OGG1
TUBGCP6
HBP1
TUBA1C
RNF39
SZRD1
TMED10
MYL12A
USP32
SCARB1
RFESD
ZC3H3
FASTKD2
UMAD1
SYVN1
ZNF302
PPAN-P2RY11
PPAN
UBOX5
FASTKD5
ZNF256
STPG2
KRIT1
ANKIB1
ANKRD36B
COMMD5
ZNF668
ZNF524
FIZ1
METTL1
EEF1AKMT3
ZNF646
IQCG
POR
RPL35A
BBS1
EBPL
TBCC
BICRAL
ESRP1
KLHL18
KIF9
RPS29
LRR1
ALDH18A1
HNRNPA2B1
CBX3
GET4
SLC39A10
EPC2
WDTC1
AP5Z1
DDX17
EIF4G2
NUDT3
STRBP
SLC25A25
NAIF1
GABARAP
SEPTIN7
WASHC2A
WASF2
WASHC2C
GPR137
BAD
CDK4
GSK3B
ATP6V0D1
RSF1
AAMDC
MSMO1
RPGRIP1L
FTO
DAGLA
MDM2
CUTA
SMARCD2
USP49
DDX42
CCDC47
SRSF1
RPUSD4
FAM118B
ILF3
SERPINI1
PDCD10
COMMD9
MTHFR
CLCN6
MAN1B1
VPS33A
FAM72C
SRGAP2B
FAM72D
OSGEP
APEX1
SLC35A5
ATG3
UVRAG
MCOLN1
FANCA
RAD9A
YJU2
SRGAP2
FAM72A
XPO7
CLN3
HPS5
GTF2H1
INO80C
MFSD1
PPP6R1
ZNF165
SLC4A2
DVL2
PCIF1
UBE3C
CDK12
WWOX
SLC25A11
RNF167
PMS1
ORMDL1
MEF2C
MEMO1
PTBP1
UBE2B
CDKL3
PIP4P1
CLSTN1
GP1BB
INTS10
SH3GL1
SUMO3
WBP2
E2F6
NDUFA4
ANKS6
UBAP2L
C1orf43
ADGRB3
MOB1B
CCDC97
MIER1
DAZAP1
PSME3
SHLD2
GLUD1
HNRNPH2
SUSD4
ST7
TNC
KANSL3
SLK
SRGAP2C
KCNMA1
FAM72B
FGGY
SUMO2
TPP1
ALG6
HM13
SCAMP5
WDR62
THAP8
OTUD7A
THRAP3
XRCC5
ADAM23
SPATC1L
TBC1D30
GPATCH3
GNS
SMARCA4
TMEM116
ERP29
ADGRL1
ITGB3BP
EFCAB7
STAU2
RABGAP1L
ELP3
RALGDS
BLOC1S4
DENR
PPP5D1
CALM3
MYCL
PRMT3
ACVR1B
DICER1
BAX
RXRA
SBK1
NSD1
KDM3A
QRICH1
TRUB2
COQ4
NPEPPS
SCYL3
RMND1
ARMT1
ARID5B
TNPO3
KDM1A
AP2A2
KDM7A
TFDP1
LPCAT3
GRHL1
FLYWCH1
PEAK1
HMG20A
DDX46
HDAC6
CBX7
STRA6
SAP30
ATP6V1C1
PRKCA
BMS1
NEXN
DIP2A
UBE2E2
BAG6
SFXN1
RRAGC
KDM4C
FASN
NDUFS7
SPTAN1
PRAME
RPS11
LUC7L2
TMEM59
SYNCRIP
TM2D2
ADAM9
TIMM22
COX16
NUF2
HOOK2
CHD7
ZNF507
ATG101
PLEKHF2
HOXC13
MINDY2
FBXL3
DNPEP
CAPRIN2
C17orf58
MAN2A2
CHIC2
ZNF830
CCT6B
CACNA2D2
CHMP7
NFU1
USP28
PHF21A
ACTN4
KDSR
WWP1
RNASEK
EIF3H
BACH2
FMC1-LUC7L2
FMC1
PATZ1
JMJD1C
CFAP206
IKZF2
AIFM1
DTNB
MAZ
IGF1R
KLHL12
USF2
RFX1
SYT7
CUTC
COX15
THAP6
PHIP
PRKCE
WBP1L
TBL3
S100A2
ATXN7L3
ADCY9
UBXN2A
CHD1
LASP1
VGLL4
UTP3
PTK2
ATXN7L2
ZCWPW1
MEPCE
RBPJ
MSS51
PXT1
KCTD20
FCHSD2
AFF4
RPL5
CABIN1
IFT140
CRAMP1
NFASC
CCDC174
SPRTN
EXOC8
IRF2BP2
BSG
MAP3K1
EFNA3
MARCHF2
TSC1
GFI1B