ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457145 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◣ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

ALDH18A1
SLC39A10
WDTC1
DDX17
EPC2
HNRNPA2B1
CBX3
EIF4G2
GABARAP
STRBP
SEPTIN7
SLC25A25
NAIF1
WASF2
NUDT3
GPR137
BAD
DAGLA
RSF1
AAMDC
GSK3B
MSMO1
RPGRIP1L
FTO
DDX42
CCDC47
USP49
FANCA
SMARCD2
SRGAP2
FAM72A
SERPINI1
PDCD10
XPO7
SRSF1
FAM72C
SRGAP2B
FAM72D
MAN1B1
MDM2
PMS1
ORMDL1
MOB1B
AURKAIP1
DICER1
SRGAP2C
FAM72B
WWOX
HDAC6
MAP3K1
ADGRL1
MEMO1
NEXN
MARCHF2
BACH2
DENR
PRAME
INTS10
RFX1
INO80C
PPP6R1
C21orf58
GP1BB
KANSL3
GYPB
WBP2
XRCC5
CSTF2
E2F6
CAPRIN2
NFE2
CFAP36
MAN2A2
NFU1
TMEM87B
CASS4
ZNF497
ZNF451
VWA7
CDK12
P2RX6
TCP11L2
POLR2J3
SYT7
THAP6
NUP214
PSMD5
H4C4
TRUB2
COQ4
TJP3
DNAJB2
YJU2
TMEM59
ZNF609
TRIM37
TRMT10A
MTTP
AIFM1
KIAA1586
FKBP8
SIRT1
RIPOR3
SUPT7L
SLC4A1AP
RPS11
CMIP
KAT5
WDR89
CEP43
NCAPD2
MRPL51
PRDX1
NXT2
PAXBP1
UROD
CASC3
ERCC6L2
FUT10
BRD7
PPIL2
NOP16
HIGD2A
CRB1
RBBP5
ANKFY1
ZNF165
VILL
UFD1
CDC45
ERMAP
KDSR
FOXJ1
CRKL
EML2
PRPF38A
ORC1
CTBS
NME1-NME2
NME1
THAP7
TUBGCP5
LYL1
SCN9A
RAB33B
COQ10B
GTF3C2
ZNF335
CENPF
SPATC1L
ZNF408
ARHGAP1
GNB2
IL1R1
LZTR1
SLFN14
PDE4C
BTBD10
REXO4
NUF2
OBSL1
INHA
SDF2L1
FBXW11
STAT6
FABP6
TNPO3
ARF3
PTMS
COASY
SUPV3L1
RPS26
ZNF391
YIF1B
PPOX
ZSCAN31
BNIP3L
ATAD2
KDM3A
GBA
PCIF1
ILF2
TBL1X
GYPE
DMAP1
MRPL40
HIRA
TOP3B
PLSCR1
TRIM69
ASXL1
HPN
ST6GAL1
FAM83A
RGL2
UBE2L3
TSC1
GFI1B
SAMD4A
AP1G1
BLVRB
BAG6
GOLGA8B
WASHC2C
NDUFS3
KBTBD4
MBD2
MED15
PUS7L
IRAK4
RPL12
LRSAM1
SIRT4
MAPK14
IQUB
ZZZ3
TUBE1
FAM229B
RRP15
AQP10
NR1H3
ACP2
AJUBA
C3orf86
EPS15
HSP90AB1
SMG7
CA1
TFPT
PRPF31
ITGB3BP
EFCAB7
CCNI
ZSCAN30
PAFAH2
SLC25A37
MRPL48
DGCR2
NDUFS7
NCAPG
CCNG2
SLC35E2A
LUC7L2
ZCCHC24
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ASCC1
ANAPC16
TIMM10B
ARFIP2
IMPA1
CLTCL1
RPS19
NDUFA2
IK
KLHL20
CDC5L
PLK3
SZT2
MED8
PTCD3
POLR1A
SEC22B
RPA2
MICOS10-NBL1
MICOS10
UTP3
RTBDN
CALM2
TRIM6-TRIM34
TRIM6
S100A13
CHTOP
GOLGA3
ARFGEF2
GABPB2
SSBP1
NUP155
H4C8
COPB2
TAF10
C1orf159
DDX39B
CCNC
ALKBH7
AP1M1
KRR1
DNAJB12
ALG14
PMVK
RBL1
RPS8
ZBTB45
SEC31A
TRAPPC9
CHCHD2
THAP9
LARS2
GET4
CSDE1
PPM1D
MRPL45
SART1
SCAMP3
S100Z
UBE3B
ADARB1
GAGE2C
GAGE2B
GAGE2A
SNRPE
MYL12A
WDR74
NBEAL2
IGF2BP3
SLC25A11
RNF167
CACTIN
TMEM18
ATXN7L2
CAPS2
SS18
MRPS28
KCNAB2
HERC1
MYBPHL
NDE1
MARF1
CCDC59
UBE2I
CCRL2
SPIDR
LENG9
TRIP4
PIH1D2
NKAPD1
C8orf37
PHF19
TAS1R1
NOL9
HMX3
BCAS2
IQCB1
EAF2
H4C3
NRL
DCAF11
KDM5C
PRR19
PAFAH1B3
ECE1
CEP85L
UBE2B
CDKL3
JMJD1C
TMEM242
SS18L2
SEC22C
PUF60
KLLN
NCOA4
ZNF444
MRPL27
EME1
TOM1L2
DRC3
HMBS
RBM26
ZNF555
ARMC8
TXNDC2
MRPS7
GGA3
MAD1L1
STX5
QRICH1
UBOX5
FASTKD5
PPP4R3A
KMT5A
HYLS1
ZDHHC6
VTI1A
ATG101
PIK3R3
RNFT1
PPIH
MDM4
RBPJ
TRIB1
CSTF2T
TARS1
PRRG2
NOSIP
PITHD1
RCCD1
TMEM167B
TRAPPC4
RPS25
YTHDC1
BSDC1
TTI2
DHPS
AP5Z1
SPNS1
TAOK1
PDE7A
COX7A2L
ARL14EP
ARNT
CFAP298-TCP10L
CFAP298
DDIT4
MDC1
GAL3ST4
HDAC8
SUPT5H
CRCP
POLR3F
DZANK1
DMAC2
PSME3
ZC3HC1
IREB2
PSMC5
FTSJ3
TTC21B
RABEP2
MRPL39
BPHL
CCDC97
GPATCH3
DGCR8
SDE2
GP6
DYNC2I2
RINT1
WNK4
PPP1R13L
POLR1G
ZMPSTE24
RPS7
WDR55
SKIV2L
NELFE
SFSWAP
GTF2H4
CACYBP
SRCAP
LOC730183
H2BC18
CD33
KMT2D
PACSIN2
ITFG2
PXT1
KCTD20
RPL5
WDR83OS
WDR83
MST1
THG1L
PDCD2L
FZD1
IFNAR1
TPR
ODR4
TIPIN
ZNF74
GYPA
SLC27A4
NCDN
KIAA0319L
MRPL10
LRRC46
PFDN4
HNRNPH1
PRR5
ATAD3A
JOSD2
PPP4R3B
AHCTF1
SH3BGR
LCA5L
RHBDD1
GPBP1L1
RPL10A
SYCP2L
WASHC2A
THRAP3
STAT3
NEK2
ATP8A1
HNRNPH2
SMG5
FDXACB1
C11orf1
TIMM17A
USP54
STRIP1
MYO1C
MORF4L2
PRMT3
SRSF7
USP9X
RPL36
ANXA2
GET1
TRMO
EIF1AD
BANF1
RBM28
TMEM248
TCTEX1D4
BTBD19
H2AZ2
PARK7
GDAP1
CXXC1
UIMC1
EIF2D
ULK4
RPL37
XPC
LSM3
SCAND1
LSM2
CAB39
NIP7
COG8
ORAI3
ATR
NHLRC4
PDE4A
SLC25A53
CHD1
SNRPD3
GUCD1
TUT1
TMEM168
NADK
GAS8
RNPEP
VPS33A
MRPL21
IGHMBP2
SLX1B
SLX1A
BOLA2B
BOLA2
SHB
SRFBP1
FAM156B
FAM156A
ALDH3B1
HSPBP1
MTERF1
DHDDS
NFYC
PROCA1
DHDH
MYL6
MCOLN1
SETD1A
RBSN
PAK1IP1
C6orf52
TIMM44
C2orf42
TNFSF9
PTGS1
TTC32
VMAC
NDUFA11
ZCCHC14
CYTH2
EBNA1BP2
CFAP57
LOC388282
MRPL54
TTC26
FAM200B
AKAP1
NMNAT1
LZIC
APBA3
PMF1-BGLAP
PMF1
ZNHIT1
PLOD3
HSPA9
DCAF10
POLDIP3
ALG1
EXD1
CHP1
RHOT1
SSR4
IDH3G
C5orf51
SH2B1
LRIG2
UQCC2
POTEE
TBRG4
NDUFAB1
PLS1
CTR9
YIPF2
TIMM29
ZYG11B
NOP14
GRK4
SLC2A12
KLHDC8B
ERAP1
ZNF180
SLC35C2
DDX41
PSMC3
NBPF1
ZNF561
ZNF510
STXBP4
COX11
DNAJC28
ZNF280A
SLC12A9
SH3D21
BMS1
BOLA2-SMG1P6
GPBP1
SPRING1
RNFT2
POC5
SPAG9
MRPS15
LMAN2
PEAK1
METTL1
HMG20A
EEF1AKMT3
FMC1-LUC7L2
FMC1
IFT140
CRAMP1
CCNL1
UMAD1
RAB5A
EFHB
RAB11A
RSPH14
NUP107
METTL2B
COMMD4
C19orf48
SLC35A4
APBB3
RTL10
GNB1L
TMEM209
TBX1
MAP10
RAPGEF2
PEX3
ADAT2
SETDB1
RFC2
NEU1
CLPB
PNISR
CNOT2
ABCF1
VAMP5
THUMPD3
H4C11
NME7
BLZF1
CEP162
UTP18
MBTD1
INO80B
HIPK3
UBP1
PHPT1
MRPL1
ISG20
AGBL3
NUFIP2
RFXANK
BORCS8
TBC1D15
SLC25A1
DHX9
LPCAT3
SMG8
S100A2
MARCHF7
MAPK1
HIKESHI
PTPN4
CPQ
CD2BP2
RPS14
TMEM222
SEC24C
KIAA1191
EVI5
TSFM
ZNF576
IRGQ
MTIF2
TMCO1
CDIPT
GNAI3
CLP1
ROBO3
PRCP
DDIAS
MTBP
MRPL13
BLCAP
WDR46
PFDN6
TCAF2
SNX15
MRPL2
KLC4
MAGEA6
PDAP1
BUD31
SLC33A1
LSG1
WWP1
HSF1
BOP1
CLDN12
ATP5MC1
RPS3A
IFTAP
PAGR1
MRPS16
TMED1
EOLA2
SPDL1
PURB
MTMR4
ATAD3B
COG7
SLC45A4
NDUFA4
SNRPC
NSUN4
TMEM101
EMC2
RNF168
CYB561D1
ZSCAN9
ARCN1
ZFAND3
VWDE
BRAP
ACAD10
CSTF1
AURKA
DUS3L
SEC61B
ALG2
STAM2
EXOSC3
C9orf16
TOE1
MUTYH
CGB2
ATP6V0D1
BLOC1S1
PSMA1
SLC24A1
INTS14
PMPCB
RBM42
NUP205
ZBTB6
AHCYL2
MUC1
NASP
MPC1
ARL2BP
GOSR2
MED23
EFTUD2
CCDC103
STK19
DXO
FUS
LSR
RPL38
FAM207A
UBXN10
PLA2G2C
ZSCAN25
SF3A3
YIPF3
POLR1C
ADPRS
GSTA4
MTMR14
POLG
WDR73
DDX59
SPDYC
ZNF524
FIZ1
ZCWPW1
MEPCE
SRSF3
RC3H2
FRA10AC1
MGRN1
KIF2C
SUV39H1
SUPT3H
LEMD2
SUPT6H
SDF2
ERGIC2
ABCF3
ARRB2
SMIM12
FAM227B
DTWD1
TIMM10
SPOCD1
PROSER3
ECH1
INKA2
DDX20
ZNF687
CDK16
SH2B3
SNAP29
PI4KA
TMEM217
TBC1D22B
NES
COPS7B
GTF2H2C
GTF2H2C_2
CDK7
WFDC3
DNTTIP1
SLC38A8
TAL1
ZNF669
HARS2
HARS1
MRPS17
SARNP
ORMDL2
PDE6D
DGAT2
H4C15
H4C14
C17orf75
ZNHIT6
PRTN3
SNRPD1
ZNF346
RBM19
GNL2
ATF7-NPFF
ATF7
DSN1
TMBIM1
MTX1
RAMAC
TSEN2
THBS3
OR4F3
OR4F29
OR4F16
PPP6R3
SH3BGRL3
PRR3
GNL1
CNPY2
YTHDF2
CDK5RAP1
UQCC1
KIFC1
TRIP6
HDAC5
TM2D1
SPATA1
GNG5
PSD4
RAB3GAP1
FAM86B2
TAF12
SLC36A1
ZNF529
IRF9
TSR2
FAM220A
ISOC2
PRXL2B
ZSCAN12
ZNF619
TRMT2A
RANBP1
MRTO4
EMC1
TRMT1
PPWD1
CENPK
BNIP1
AP3S2
TEFM
FCF1
AREL1
PPARD
H4C12
FAM76A
TMEM268
MAP2K2
ZDHHC7
CFAP54
COQ3
ABCB6
MRPS33
MTF2
GTF2H2
NKIRAS1
TMEM39B
RNF40
CCDC189
UTP20
AHCYL1
RPL15
SF3B6
FAM228B
RFX5
USP36
PAF1
NFKBIL1
ATP6V1G2
TTC16
PTRH1
MED16
USP6NL
PRORP
PPP2R3C
TMCC2
CFAP20
FUCA2
DNAJB6
RILP
UBE2T
LPCAT4
CARM1
MAK16
SPINK4
MRPS18C
HELQ
CCT8
DBF4B
GPN3
FAM216A
AARS2
VANGL1
CNTRL
C5
CLPTM1
RBKS
BABAM2
VPS26C
YARS2
ZNF397
ETFA
CPPED1
ZNF574
GCK
HSDL2
CUL7
CCDC9
RPUSD4
FAM118B
URM1
CEP350
NOTCH2NLC
MRPS14
HAUS5
UBLCP1
SETD4