ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976672 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◣ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L8
MTRNR2L2
GRB7
TMEM199
POLDIP2
CRBN
TOMM22
ERAL1
GRHL2
RGPD2
RGPD1
POLR2J3
UBE3B
SFSWAP
STARD3
STAT6
PGAP3
ERBB2
MRPL45
GET3
PSMD3
MTBP
MRPL13
UNC13D
RBM48
PEX1
SLC45A4
ISY1-RAB43
ISY1
RBBP8NL
TSR3
GNPTG
VPS50
HEPACAM2
HEXA
HES1
SEMA3B
KAT8
LZTR1
GFM1
POLR2J2
TXN2
POLR2J
UBE2I
SOCS2
YAP1
SLIRP
ALKBH1
TOP3A
SMCR8
PDAP1
BUD31
SUPT7L
SLC4A1AP
MRPS15
SUPT6H
SDF2
C1orf174
MOCS3
DPM1
SRI
LAMP1
DMAC2
ATP5MF-PTCD1
ATP5MF
PSMD1
NAGPA
TRIB1
AXL
MRTO4
EMC1
RPTOR
UPK3B
SAP30BP
RECQL5
THAP7
MED6
SLC25A45
RPL23A
C8orf33
SLC35B1
CCDC97
STX16
LRRC47
NEURL2
CTSA
ZNF335
TRMT2A
RANBP1
TET3
PHAX
ABCB8
TAS1R1
NOL9
DDX23
EIF3H
MIEN1
SALL4
RBBP5
CD55
IDH3B
SUMF1
RTF2
ATG14
NGDN
EXOSC5
BCKDHA
NCBP2AS2
NCBP2
ZNF383
DNAJC11
DOHH
ELP3
POLR3F
DZANK1
ZNF408
ARHGAP1
MTRNR2L9
UBQLN1
ZNF830
CCT6B
C16orf91
PPWD1
CENPK
LTO1
TMEM258
FEN1
MRPL10
LRRC46
TMEM208
LRRC29
FAM162A
CCDC58
RCE1
TSFM
NOL8
CENPP
PALB2
DCTN5
ZZZ3
HAGH
FAHD1
MAN2C1
NOM1
SEPTIN9
PSMG2
CEP76
KMT5B
C5orf51
CDKAL1
ZGPAT
ARFRP1
PRPF6
PSMB7
NDUFA2
IK
TCTEX1D4
BTBD19
STYXL1
SENP5
RPS26
SLC25A53
ZNF165
BLOC1S1
U2SURP
SEC61B
ALG2
INO80D
SPNS1
CASC3
TATDN3
NSL1
SMN2
SMN1
SUPV3L1
TBRG4
DDX46
DIABLO
BHLHE40
YJU2
SART3
ISCU
WASHC5
NSMCE2
GABRR1
ZNF2
VPS52
RPS18
TXNL4B
DHX38
PFKM
SENP1
RIN1
TRMO
TMEM203
NDOR1
BRPF1
FUT1
NVL
METTL2A
CENPBD1
RAE1
RAD9A
BRWD1
FASTKD2
SNRPE
UBE2M
TMEM40
MB
VIRMA
NDUFA9
AKAP3
TRIQK
NCAPH2
LMF2
PFDN1
APOBEC3H
SLC39A9
ERH
BIRC3
ZNF17
MRPL58
TFPT
PRPF31
TRUB2
COQ4
DPP3
CCDC174
BABAM1
NUP107
TJP2
REEP4
SF3B3
COG4
REXO1
SEMA5B
NR1H2
CEP162
ZNF576
IRGQ
MAP3K7
NSA2
GFM2
DERL1
ZSCAN25
EPS8
OAZ3
MRPL9
OXNAD1
DPH3
SLPI
RNF39
CCDC124
HUS1
ORAI3
PTP4A1
THUMPD1
MED23
MRPL53
PPIL4
ARMC1
CCDC59
FAIM
WDR53
FBXO45
ZSCAN22
TRMT1
PSME3
DGAT2
CPSF1
API5
NUP214
MRPS7
GGA3
TSN
SF3A3
RRNAD1
ISG20L2
NOC2L
WDR24
GTPBP4
CBLL1
GPATCH3
RTEL1
ATG101
VGLL4
ABT1
VAC14
FAM222B
LRFN4
NOL11
UBIAD1
CCNT1
DNAH5
LAMTOR1
BMS1
FOS
DDX49
COPE
SCARB1
ENOSF1
SMPD4
MZT2B
SKIL
FAM83A
DNAJC30
BUD23
SEC13
COMMD2
MAPKAPK5
ERGIC2
ZG16B
MRPL38
CLPTM1
PRSS22
FLOT2
MRPL3
ZNF461
GATB
GCN1
RPL26L1
FASTK
NOL10
NUP85
FUBP3
COLEC11
SART1
CCDC12
MRPL12
EIF2D
RWDD1
CDK12
PPP1R37
TPD52L2
FBXW2
ALKBH3
CDKN2AIPNL
PSKH1
KMT5C
GTF2IRD2B
HTRA2
ICE1
TRIP4
ZCCHC4
PDRG1
CZIB
KRR1
LGALS8
FADD
MFN2
OSCAR
NDUFA3
PSMD7
DOK7
SMG8
NDUFB5
MRPL47
XAB2
CNPY2
ZFYVE26
CGGBP1
C3orf38
TOMM6
TIMM22
NFKBIA
AP5Z1
OBSL1
INHA
MAF1
SETD3
CCNK
MAD2L1BP
UQCRQ
GDF9
PRR3
GNL1
BIRC2
VPS33A
DDX41
ZNF507
PHB2
KAT6A
PNO1
PEPD
TIMM23
FOXS1
IL1RN
ZBTB45
TRAF4
GTF2H3
EIF2B1
SMIM12
PUS10
PEX13
TFAP2C
MRPL21
IGHMBP2
KLK6
PCYT1A
METTL17
NOP58
TMED2
CDK11A
TM4SF4
EIF2S1
ATP6V1D
SNRPC
ZNF668
MRPS11
MRPL46
INTS1
ZNF256
ZNF646
DHRS3
COX16
TBL3
PARG
D2HGDH
DUSP6
LMAN2
EFTUD2
CCDC103
TTI1
RPRD1B
COPS8
ZFP62
SLC7A6OS
PRMT7
COPS7B
NFKBIZ
CD63
ATF3
ATP6V1H
SNRNP200
LRATD2
SUGCT
MPLKIP
TCERG1
PISD
TUBD1
RPS6KB1
FLOT1
CACTIN
SERPINH1
C5orf15
TAGLN2
NUS1
PEX26
GID8
DIDO1
VEGFA
PPAN-P2RY11
PPAN
OST4
NDUFAF5
ESF1
MAGOH
TMEM123
PARP4
PMPCB
PIK3C2B
CDK5RAP2
RARS1
GJB5
CLDN22
FAM200A
SAMM50
TBL1X
MCM7
AP4M1
SRP68
RAD51AP1
C12orf4
GTF3C5
TPGS1
FOSB
TRIM4
CLCF1
CASP8
CSTF1
AURKA
GOSR2
MDM4
YIPF3
POLR1C
TFIP11
PRCC
CDK11B
P3H4
FKBP10
EIF2B2
ECH1
EIF1AD
BANF1
TMEM147
RRP36
CTNNBL1
BBS1
SRD5A1
RBM22
ZNF524
FIZ1
SSNA1
ANAPC2
KRT17
ADPRS
NPAS2
E2F4
COA8
BAG5
ZNF142
BCS1L
DGCR6L
DHRS13
NMNAT1
LZIC
SH2B1
MRPL1
INKA2
DDX20
RAMAC
MORF4L1
ALDH3B2
PAN2
TSC22D4
ALDH18A1
HNRNPA2B1
CBX3
GET4
SLC39A10
EPC2
WDTC1
DDX17
EIF4G2
NUDT3
STRBP
SLC25A25
NAIF1
GABARAP
SEPTIN7
WASHC2A
KAT5
WASF2
WASHC2C
UBE2Q1
GPR137
BAD
CDK4
GSK3B
ATP6V0D1
RSF1
AAMDC
MSMO1
RPGRIP1L
FTO
DAGLA
MDM2
CUTA
CLCN7
SMARCD2
USP49
DDX42
CCDC47
SRSF1
RPUSD4
FAM118B
GBA
ILF3
SERPINI1
PDCD10
COMMD9
MTHFR
CLCN6
MAN1B1
ATP6V1G1
FAM72C
SRGAP2B
FAM72D
OSGEP
APEX1
SLC35A5
ATG3
UVRAG
MCOLN1
FANCA
AURKAIP1
SRGAP2
FAM72A
XPO7
CLN3
HPS5
GTF2H1
INO80C
MFSD1
PPP6R1
NME1-NME2
NME1
SLC4A2
DVL2
PAXBP1
PCIF1
UBE3C
ZDHHC6
VTI1A
AMDHD2
ARHGAP32
WWOX
SLC25A11
RNF167
ATAD2
PMS1
ORMDL1
SMG7
MEF2C
ITFG2
MEMO1
PTBP1
UBE2B
CDKL3
PIP4P1
CLSTN1
GP1BB
INTS10
SH3GL1
SUMO3
WBP2
E2F6
NDUFA4
LANCL2
ANKS6
UBAP2L
C1orf43
SSBP1
ADGRB3
MOB1B
MIER1
DAZAP1
RRP15
SHLD2
GLUD1
HNRNPH2
SUSD4
ST7
TNC
KANSL3
SLK
SRGAP2C
KCNMA1
FAM72B
FGGY
SUMO2
TPP1
ALG6
HM13
SCAMP5
WDR62
THAP8
OTUD7A
THRAP3
USP30
XRCC5
SLC33A1
ADAM23
SPATC1L
STX6
TBC1D30
GNS
SMARCA4
RAB3IP
LARP1
TMEM116
ERP29
ADGRL1
VPS11
LIMA1
ITGB3BP
EFCAB7
STAU2
RABGAP1L
RALGDS
EIF5A2
BLOC1S4
DENR
PPP5D1
CALM3
MYCL
PRMT3
ACVR1B
NUDCD3
DICER1
BAX
ZNF497
RXRA
SBK1
NSD1
SPHK2
RPL18
KDM3A
QRICH1
NPEPPS
SCYL3
RMND1
ARMT1
ARID5B
PSMD5
EIF3F
FSCN1
TNPO3
PLAGL1
KDM1A
AP2A2
KDM7A
GPRC5A
TFDP1
VWA7
LPCAT3
GRHL1
NDUFAB1
FLYWCH1
TMEM18
NOP16
HIGD2A
PEAK1
METTL1
HMG20A
EEF1AKMT3
HDAC6
CBX7
STRA6
SAP30
ATP6V1C1
PRKCA
NEXN
LSG1
DIP2A
UBE2E2
BAG6
SFXN1
RRAGC
KDM4C
FASN
NDUFS7
SPTAN1
PRAME
RPS11
LUC7L2
TMEM59
SYNCRIP
KRT80
TM2D2
ADAM9
SERP1
EIF2A
PDCD6IP
NUF2
BNIP1
HOOK2
TTC32
CHD7
PLEKHF2
HOXC13
MINDY2
FBXL3
DNPEP
CAPRIN2
C17orf58
MAN2A2
CHIC2
CACNA2D2
CHMP7
NFU1
USP28
PHF21A
MYL12A
ACTN4
KDSR
WWP1
AAAS
RNASEK
FEM1A
BACH2
FMC1-LUC7L2
FMC1
PATZ1
JMJD1C
CFAP206
RPS14
NAPA
IKZF2
AIFM1
DTNB
FAM133B
MAZ
IGF1R
KLHL12
LRRC23
METTL2B
USF2
RFX1
SYT7
CUTC
COX15
THAP6
HSPBP1
GTF2H4
UBE2L3
PHIP
PRKCE
WBP1L
S100A2
DPP8
ATXN7L3
ADCY9
UBXN2A
CHD1
URM1
LASP1
UTP3
ETV4
PTK2
ATXN7L2
ZCWPW1
MEPCE
RBPJ
MSS51
PXT1
KCTD20
FCHSD2
AFF4
RPL5
CABIN1
IFT140
CRAMP1
NFASC
SPRTN
EXOC8
TMEM41A
IRF2BP2
BSG
MAP3K1
EFNA3
HSPA9
COASY
TTC31
MARCHF2
CCDC142
TSC1
GFI1B
C1QTNF1
COMMD4
RBKS
BABAM2
PSMA1
FRMPD1
PTPN12
EIF4A2
BRIX1
LYPLA1
FAM98B
DNAJB12
SLC24A1
INTS14
OAZ1
FZR1
ZNF3
TAOK1
GOLGA3
MAPKAPK3
KLHL32
GFER
SCAF11
KMT2D
UPF1
TIMM50
ZMPSTE24
PTPRG
PKP2
ZBTB14
ZC3HC1
CTBP1
LCOR
TMEM242
CCNI
PES1
REXO4
TMEM167B
ZNF217
CSTF2
MELK
MAST2
LYPLAL1
GAB2
CCDC88A
AP3S2
CBX6
C19orf48
NDUFB3
FAM126B
CCAR2
ZNF609
PTBP3
ZBTB18
MLLT10
RBM19
NDUFS3
KBTBD4
MRFAP1
SPPL3
ELAPOR2
CMIP
MED1
EIF4H
PKNOX1
SGO1
WDR74
PTP4A3
AUTS2
ARMC8
PTCD3
POLR1A
CFAP36
TEFM
C12orf66
LIFR
COPS4
RBM14-RBM4
RBM14
GNB1
TIPARP
BHLHB9
PPP2R5A
PVALEF
AATK
MTIF2
ERCC6L2
ULK4
THAP1
HERC5
STAT5B
RYK
PARD6B
GTF2A1
SLX4IP
POMZP3
CRKL
SMURF1
ZNF292
PPP2R3B
ARPC2
MED20
BYSL
SRSF6
IQCG
YTHDF2
FANCD2
COMMD8
EVPLL
ATOH7
FEZ1
NFE2
ALG14
AMOTL1
GSDMD
TMEM266
MRPS33
VILL
MRPL40
HIRA
FBXL5
COLEC12
RABEP1
P4HB
ATG9A
ANKZF1
SGTA
MRPL27
EME1
RALGPS2
ELP5
CTDNEP1
NF2
HHAT
CACYBP
C3orf70
AMMECR1
SNX19
ARRDC3
BTBD3
TJP3
DUS2
DDX28
KLF16
TENT2
SYT12
TOR1AIP1
AVEN
NEK6
TM9SF4
BRF2
NXT2