ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930121 | Acute myeloid leukemia
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◣ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX20532176: hESC H1

◢ SRX20532177: hESC H1

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

WASHC2C
HEXA
WASHC2A
AP5Z1
LAMP1
COMMD9
GET4
FIGNL2
KAT5
RAD9A
UBE2Q1
ATP6V0D1
CYB561
CCL4L2
RNF149
MTHFR
CLCN6
MCOLN1
LUZP1
CLCN7
BPI
BAX
AOAH
NFX1
RPS6KA1
LST1
MTRNR2L8
MTRNR2L2
ALDH18A1
GRB7
HNRNPA2B1
CBX3
SLC39A10
EPC2
WDTC1
SLC45A4
DDX17
EIF4G2
NUDT3
STRBP
SLC25A25
NAIF1
GABARAP
SEPTIN7
TMEM199
POLDIP2
WASF2
MRPL45
ERAL1
NEURL2
CTSA
GPR137
BAD
POLR2J3
CDK4
HAGH
FAHD1
SFSWAP
GSK3B
NAGPA
RSF1
AAMDC
SPATC1L
SPNS1
MSMO1
CRBN
RPGRIP1L
FTO
RGPD2
RGPD1
UBE3B
TRMO
RBBP8NL
RBM48
PEX1
MTBP
MRPL13
DAGLA
GRHL2
PSMD3
MDM2
SKIL
SUMF1
RAE1
SLC35B1
CUTA
HES1
SMARCD2
USP49
TOMM22
C1orf174
DDX42
CCDC47
SRSF1
SUPT7L
SLC4A1AP
RPUSD4
FAM118B
C8orf33
GBA
ILF3
STARD3
TRIB1
ISY1-RAB43
ISY1
ZZZ3
POLR3F
DZANK1
SERPINI1
PDCD10
RBBP5
SOCS2
MAN1B1
STX16
LZTR1
STAT6
TSR3
GNPTG
ATP6V1G1
THAP7
VPS50
HEPACAM2
UNC13D
VPS33A
BHLHE40
FAM72C
SRGAP2B
FAM72D
MIEN1
OSGEP
APEX1
ZNF335
SLC35A5
ATG3
PGAP3
ERBB2
YJU2
UVRAG
TBL1X
TRMT2A
RANBP1
CCDC59
FANCA
PSMB7
POLR2J
CLPTM1
AURKAIP1
SUPV3L1
SUPT6H
SDF2
SNRPE
TFPT
PRPF31
IDH3B
RPS26
BLOC1S1
SMN2
SMN1
DMAC2
NUP214
SRGAP2
FAM72A
TBRG4
WASHC5
NSMCE2
MOCS3
DPM1
VIRMA
TET3
POLR2J2
ZNF408
ARHGAP1
C5orf51
ATF3
SALL4
XPO7
CLN3
MRTO4
EMC1
HPS5
GTF2H1
INO80C
SRI
PDAP1
BUD31
SLC25A53
TSFM
GET3
TOP3A
SMCR8
PFKM
YAP1
CDKAL1
SLC25A45
MFSD1
PPP6R1
ZNF165
SAP30BP
RECQL5
CASC3
ATP5MF-PTCD1
ATP5MF
NME1-NME2
NME1
DOK7
SLC4A2
SLIRP
ALKBH1
DVL2
PAXBP1
TRMT1
C16orf91
ZSCAN22
PCIF1
U2SURP
CEP162
ZNF383
UBE3C
ZDHHC6
VTI1A
AMDHD2
EIF2D
SENP1
CDK12
ARHGAP32
FLOT2
TAS1R1
NOL9
WWOX
SLC25A11
RNF167
AXL
ZSCAN25
ATAD2
PMS1
ORMDL1
MTRNR2L9
ZBTB45
SMG7
GATB
MEF2C
GFM1
ITFG2
MEMO1
FLOT1
MRPS15
FAM83A
PTBP1
KRR1
UBE2B
CDKL3
TBC1D30
HUS1
PIP4P1
RTF2
CLSTN1
DDX41
DNAJC11
NUP107
ZNF668
VAC14
GP1BB
INTS10
PLAGL1
SUSD4
KAT8
SH3GL1
NDUFA2
IK
SUMO3
KCNMA1
WBP2
E2F6
NDUFA4
PHAX
ZNF576
IRGQ
TRIP4
CCNT1
LANCL2
ECH1
ANKS6
UBAP2L
C1orf43
SEMA3B
SSBP1
ADGRB3
MOB1B
CCDC97
MIER1
DAZAP1
RAD51AP1
C12orf4
RRP15
PSME3
UBE2I
SHLD2
GLUD1
HNRNPH2
ST7
TNC
KANSL3
SLK
SRGAP2C
FAM72B
TJP2
FGGY
SUMO2
NGDN
TPP1
ALG6
HM13
SCAMP5
PPWD1
CENPK
UBQLN1
WDR62
THAP8
OTUD7A
THRAP3
USP30
XRCC5
SLC33A1
BIRC3
ADAM23
TRAF4
EPS8
RPTOR
ABCB8
SEPTIN9
STX6
GPATCH3
GNS
SMARCA4
MRPS7
GGA3
RFX1
RAB3IP
ATG14
LARP1
TXN2
ZNF2
TSN
PSMD1
DHRS13
TMEM116
ERP29
ADGRL1
VPS11
LIMA1
ITGB3BP
EFCAB7
CACTIN
STAU2
ZNF524
RABGAP1L
FIZ1
ELP3
RALGDS
EIF5A2
TMEM208
LRRC29
BLOC1S4
DENR
PPP5D1
CALM3
MYCL
PRMT3
RTEL1
ACVR1B
NUDCD3
DICER1
MAP3K7
MRPS11
MRPL46
DUSP6
ZNF497
RXRA
SBK1
FAIM
NSD1
ZCCHC4
SPHK2
RPL18
KDM3A
QRICH1
TRUB2
COQ4
NPEPPS
OAZ3
MRPL9
SCYL3
RMND1
ARMT1
ARID5B
NCBP2AS2
NCBP2
PSMD5
EIF3F
FSCN1
TNPO3
DGAT2
KDM1A
AP2A2
SF3A3
KDM7A
GPRC5A
TFDP1
DDX23
VWA7
NOL8
CENPP
LPCAT3
LMAN2
GRHL1
PUS10
PEX13
NDUFAB1
FLYWCH1
TMEM18
EIF1AD
BANF1
NOP16
HIGD2A
DNAJC30
BUD23
PEAK1
METTL1
HMG20A
EEF1AKMT3
DDX46
DPP3
HDAC6
CBX7
STRA6
SAP30
ATP6V1C1
STYXL1
PRKCA
BMS1
NEXN
LSG1
DIP2A
UBE2E2
COPS7B
BAG6
SFXN1
RRAGC
UPK3B
KDM4C
FASN
NDUFS7
SMG8
NVL
SPTAN1
REEP4
METTL2A
ATP6V1H
PRAME
MRPL10
LRRC46
SH2B1
RPS11
LUC7L2
TMEM59
SYNCRIP
DHRS3
KRT80
TM2D2
ADAM9
TIMM22
TCERG1
LTO1
SERP1
EIF2A
COX16
PDCD6IP
NFKBIA
NUF2
BNIP1
HOOK2
TTC32
TMEM203
NDOR1
CHD7
ZNF507
TMEM40
BRPF1
ATG101
PLEKHF2
HOXC13
MINDY2
FBXL3
DNPEP
PRR3
GNL1
SART3
ISCU
ZGPAT
CAPRIN2
C17orf58
ARFRP1
MAN2A2
CHIC2
ZNF830
CCT6B
LRFN4
CACNA2D2
CHMP7
NFU1
MAN2C1
USP28
PHF21A
MYL12A
ACTN4
PSMG2
CEP76
KDSR
NDUFB5
MRPL47
WWP1
SF3B3
COG4
SSNA1
ANAPC2
AAAS
RNASEK
EIF3H
UBE2L3
FEM1A
BACH2
FOS
FMC1-LUC7L2
FMC1
PATZ1
JMJD1C
CFAP206
RPS14
NAPA
TFAP2C
IKZF2
MAF1
FRMPD1
AIFM1
KMT5B
DTNB
CENPBD1
C3orf70
FAM133B
MAZ
IGF1R
DNAH5
KLHL12
LRRC23
SP2
METTL2B
COLEC12
USF2
HERC5
SYT7
INTS1
CUTC
COX15
THAP6
HSPBP1
GTF2H4
GABRR1
PHIP
GTF3C5
PRKCE
MB
WBP1L
CSTF1
AURKA
TBL3
S100A2
DPP8
NDUFA9
ATXN7L3
AKAP3
FAM222B
EIF2S1
ATP6V1D
ADCY9
VPS52
RPS18
UBXN2A
PRPF6
CHD1
URM1
LASP1
VGLL4
UTP3
MRPL1
ETV4
PTK2
ATXN7L2
ZCWPW1
MEPCE
XAB2
SEC13
RBPJ
MSS51
PXT1
KCTD20
FCHSD2
AFF4
RPL5
COMMD2
CABIN1
IFT140
CRAMP1
NFASC
CCDC174
SPRTN
EXOC8
ZNF17
TMEM41A
IRF2BP2
BSG
MAP3K1
EFNA3
HSPA9
COASY
TTC31
MARCHF2
CCDC142
TSC1
GFI1B
C1QTNF1
COMMD4
RBKS
BABAM2
PSMA1
WDR53
FBXO45
PTPN12
GCN1
EIF4A2
BRIX1
LYPLA1
FAM162A
CCDC58
FAM98B
DNAJB12
ATG9A
ANKZF1
ABT1
SLC24A1
INTS14
OAZ1
FZR1
ZNF3
TAOK1
GOLGA3
PHB2
MAPKAPK3
KLHL32
GFER
SCAF11
KMT2D
BIRC2
UPF1
TIMM50
GOSR2
ZMPSTE24
RPL23A
PTPRG
PKP2
ZBTB14
RCE1
LRRC47
ZC3HC1
MRPL21
IGHMBP2
LAMA3
KMT5C
LAMTOR1
CTBP1
TRIQK
LCOR
OXNAD1
DPH3
TMEM242
CCNI
PES1
REXO4
TMEM167B
ZNF217
CSTF2
CNPY2
MELK
MAST2
LYPLAL1
GAB2
CCDC88A
AP3S2
CBX6
C19orf48
NDUFB3
MED23
FAM126B
GTF2H3
EIF2B1
EXOSC5
BCKDHA
PRSS22
CD55
CCAR2
SUGCT
MPLKIP
ZNF609
KAT6A
DIABLO
PTBP3
RWDD1
MAPKAPK5
ZBTB18
MLLT10
RBM19
NDUFS3
KBTBD4
COLEC11
MRFAP1
REXO1
PMPCB
SPPL3
HR
ERGIC2
NSA2
GFM2
ELAPOR2
CMIP
MED1
EIF4H
OBSL1
INHA
PKNOX1
PNO1
SGO1
WDR74
PTP4A3
AUTS2
ARMC8
PTCD3
POLR1A
CFAP36
TEFM
C12orf66
MAPT
SEMA5B
LIFR
COPS4
RBM14-RBM4
RBM14
GNB1
TIPARP
TAGLN2
BHLHB9
PPP2R5A
PVALEF
AATK
SNRPC
MTIF2
ERCC6L2
ULK4
THAP1
ALKBH3
STAT5B
RYK
CALM2
PARD6B
GTF2A1
SLX4IP
POMZP3
CRKL
SMURF1
ZNF292
TXNL4B
PPP2R3B
DHX38
ARPC2
MED20
BYSL
SRSF6
IQCG
YTHDF2
FANCD2
COMMD8
EVPLL
ATOH7
FEZ1
NFE2
FZD1
CHRM3
ALG14
AMOTL1
RAB5B
GSDMD
TMEM266
MRPS33
VILL
MRPL40
HIRA
FBXL5
CIC
RABEP1
P4HB
BRWD1
SGTA
MRPL27
EME1
DOHH
RALGPS2
ELP5
CTDNEP1
NF2
HHAT
MRPL53
CACYBP
AMMECR1
MCM7
AP4M1
NCAPH2
LMF2
SNX19
ARRDC3
BTBD3
TJP3
DUS2
DDX28
KLF16
TENT2
SYT12
SLPI
TOR1AIP1
AVEN
NEK6
TM9SF4
BRF2
NXT2
ZNF451
SLC6A6
OPA1
MTF2
ADARB1
TRAPPC2L
TCTA
RPS7
RHOA
GALNS
SREK1IP1
CWC27
KIAA1586
EXOC6
SLC30A4
PIK3C2B
SNX12
PLSCR1
MED6
ZRANB2
PIK3R3
CAPS2
PPP1R37
SIAH1
RNFT1
DUS3L
RBM28
MAGOH
NUDT5
GTPBP4
CHEK1
CDC123
GLCCI1
C20orf141
PFDN1
PALB2
DCTN5
BMI1
PHF3
FUT10
TSPAN7
RUVBL1
PAPSS1
NR4A1
GTF2H2C
WDR89
TPD52L2
THAP12
GVQW3
GRWD1
TRIM37
TMCC1
LFNG
CCNL1
MSL2
USPL1
PAFAH2
HMGB1
ZC3H7A
ARFGEF2
ZNF787
UBE2E3
HP1BP3
PTPRF
YEATS2
ATP6V0B
UBXN4
PHF12
PDE12
NSD2
DENND2B
ORAI3
MRPL54
ACACA
OPRD1
APBB1
MAPK8IP1
INKA2
DDX20
NCOA5
GNB2
CEP43
PIH1D2
NKAPD1
SGPL1
ATF6
GUCA2A
USP6NL
SEC61B
H4C4
ALG2
HEMK1
FAM174C
CBLL1
ASCC1
ANAPC16
SRSF11
MINK1
H4C15
H4C14
THEM4
SLC35A4
NCAPD2
MRPL51
GTF2IRD2B
DHX15
APBB3
SRCAP
PXN
MRPL48
LOC730183
CPEB2
NR1H2
GYPB
TMEM248
PDE4DIP
MYOG
FHL2
TCP11L2
IPO11
ZAR1L
PCID2
CUL4A
BRCA2
CASS4
SKIDA1
MRPS23
EFTUD2
CCDC103
SETD3
RUFY1
CCNK
ABCA5
ST8SIA1
PEPD
RPL27
PRKG2
LGALSL
HNRNPU
EML2
PFDN4
SYT1
GSN
SINHCAF
BCL2L13
GRK7
SRCIN1
PPARGC1A
DNAJB2
RPS12
CEP63
ANAPC13
THOC1
INO80D
SULF1
CCNG2
ROCK2
PMVK
CWC25