ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457146 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◣ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

ALDH18A1
WDTC1
SLC39A10
DDX17
STRBP
EIF4G2
SLC25A25
NAIF1
EPC2
HNRNPA2B1
CBX3
WASF2
SEPTIN7
GABARAP
NUDT3
GSK3B
GPR137
BAD
RSF1
AAMDC
RPGRIP1L
FTO
MSMO1
USP49
DDX42
CCDC47
SRSF1
MAN1B1
SERPINI1
PDCD10
MDM2
DAGLA
FAM72C
SRGAP2B
FAM72D
SMARCD2
GP1BB
FANCA
SRGAP2
FAM72A
XPO7
WBP2
PMS1
ORMDL1
MEMO1
MOB1B
AURKAIP1
SRGAP2C
FAM72B
WWOX
INO80C
MAN2A2
NFU1
PPP6R1
CAPRIN2
INTS10
TMEM59
PRAME
DICER1
BACH2
DENR
E2F6
AIFM1
YJU2
ADGRL1
CDK12
CSTF2
KANSL3
RFX1
TBL1X
CFAP36
PSMD5
KIAA1586
CMIP
TJP3
MARCHF2
TRUB2
COQ4
PI16
HDAC6
CEP43
TRIM37
ARMC8
CTBS
NCAPD2
MRPL51
NFE2
ZNF451
NEXN
PCIF1
SYT7
XRCC5
KDSR
NR4A1
MAP3K1
NXT2
SCN9A
TNPO3
PAXBP1
SPINK4
GYPE
VWA7
CENPF
IL1R1
CAPS2
GTF3C2
CASS4
KDM3A
ZNF497
VILL
PLSCR1
LZTR1
ATAD2
BTNL10
CASC3
EML2
GBA
KLLN
ZNF408
ARHGAP1
ZNF609
TCP11L2
PTCD3
POLR1A
CHCHD2
TMEM18
FKBP8
P2RX6
NUP214
GYPB
HPN
THAP6
RPS11
H4C4
CRKL
MAD1L1
ZNF165
TSC1
GFI1B
WDR89
H4C8
GNB2
MBD2
NDUFS7
DNAJB2
MAPK14
ILF2
SLFN14
PSIP1
DNAJB12
PPIL2
FBXW11
BAG6
PRDX1
FUT10
GOLGA8B
USP11
AP1G1
SIRT1
PLSCR2
C3orf86
METTL1
EEF1AKMT3
TUBGCP5
KLHL20
SAMD4A
GTF2H4
BCL6
ASCC1
ANAPC16
SDE2
SLC35E2A
FAM83A
PIK3R3
PDE4C
ZDHHC6
VTI1A
UFD1
CDC45
PXT1
KCTD20
RTBDN
RBPJ
CCNI
ST6GAL1
NOP16
HIGD2A
PRPF38A
ORC1
THAP7
UROD
POLR2J3
YIF1B
SUPV3L1
EIF4A2
TMEM191C
SPIDR
FZD1
WASHC2C
SNRPE
BRWD1
UBE3B
ATP2C1
NBEAL2
ERCC6L2
SS18L2
SEC22C
BNIP3L
TIMM10B
ARFIP2
ERMAP
TAF10
ANKFY1
CNKSR3
CLPTM1
PPOX
LYL1
BRPF1
NDUFS3
KBTBD4
SOCS2
LSM2
FABP6
ZNF510
RAB33B
CACTIN
IL1RL1
TOM1L2
DRC3
TRAPPC9
TUBE1
FAM229B
UBE2L3
PIH1D2
NKAPD1
SPATA24
SLC25A11
RNF167
ALG14
SEC31A
THAP9
RIPOR3
ZNF74
QRICH1
CSTF2T
GP6
WWP1
PRKCI
PITHD1
REXO4
H4C15
H4C14
RBBP5
UBE2B
CDKL3
SH2B1
VPS52
RPS18
UBC
HEPH
ARID1A
DDIT4
TFR2
TTC12
SF3A3
JMJD1C
SLC35A4
APBB3
GUK1
RTN3
CCDC97
RPA2
VPS13B
ALKBH7
TMEM69
FOXJ1
GPBP1L1
ITGB3BP
EFCAB7
KLHL18
KIF9
C21orf58
NOL8
CENPP
INKA2
DDX20
WDR83OS
WDR83
OBSL1
INHA
RNFT1
GABPB2
POLM
LPCAT3
UTP18
MBTD1
MAP1LC3B2
ATF7-NPFF
ATF7
PAK1IP1
C6orf52
MARCHF7
DGCR8
MST1
FAM53C
CDC25C
EZH1
CA1
USP3
HMBS
POLA1
IREB2
EIF1AD
BANF1
TTC26
PRR5
MED15
STAT6
VAT1
TXNIP
PDE7A
PTPN12
RRN3
C1orf159
TIPRL
BTBD10
IQCH
AAGAB
GOLGA3
ATF3
CCRL2
SEC22B
PLK3
RNF168
RPS26
SLC33A1
COQ10B
TBX18
NEU1
PARK7
TRIM69
TCFL5
SPATC1L
BAZ1B
ISY1-RAB43
ISY1
SMG7
CDC5L
HOXB9
KCNJ11
MTBP
MRPL13
SUPT7L
SLC4A1AP
TRMT2A
RANBP1
C9orf16
MRPL54
APBA3
AQP10
CYB561D1
C2orf50
ECH1
H4C3
TSC22D4
BAHCC1
PPARD
NME1-NME2
NME1
GDAP1
PRRC2A
USP6NL
CRB1
CALM2
ABCF1
HERC1
TRIB1
PSME3
VMAC
NDUFA11
TOP3B
LMAN2
TPR
ODR4
ATAD3A
MYBPHL
RPL11
CCDC59
GTF2B
CFAP20
CCNG2
ULK4
MRPL40
HIRA
TRMT10A
MTTP
ETFRF1
CFAP94
TRAPPC4
RPS25
SH3BGR
LCA5L
GAS8
ICAM2
NDUFAF1
TMCO6
LRRIQ3
FPGT-TNNI3K
FPGT
YARS1
S100PBP
S100Z
ZC3HC1
RHOT1
TMC6
DDX41
DSTYK
TMEM87B
EPS15
ZCCHC14
ATG101
FDXACB1
C11orf1
ARF3
NHLRC4
ZNF576
IRGQ
MRPL27
EME1
RRP15
RGL2
RUNX1T1
YARS2
TMEM9
UTP3
JOSD2
TMCC2
PPP4R3B
PRPSAP1
MDC1
IQUB
MYL12A
MAPKAPK3
MRPL48
CISH
H2AZ2
AP1M1
HYLS1
DHDH
ZBTB45
KDM1A
RCOR3
CEP85L
NR1H3
ACP2
SSBP1
DGCR2
NCOA4
ATF4
PDAP1
BUD31
PAFAH2
SSBP2
PPM1D
IFT172
CTR9
H4C11
TRIM6-TRIM34
TRIM6
ZNF813
TLE2
TAS1R1
NOL9
TRIB3
ETFA
ZNF335
PHF19
USP9X
WDR74
TCTEX1D4
BTBD19
GSE1
DKKL1
LARS2
THEM4
ISG20
TRMO
LRRC23
NDUFB3
FAM126B
SELENOH
NOCT
C19orf25
COX7B
PLS1
CYTH2
HUS1
MICOS10-NBL1
MICOS10
TMBIM1
USP32
PRORP
PPP2R3C
BRD7
PDCD2L
SMG5
MGRN1
C5orf51
HNRNPH2
CCDC7
KIF2C
BPNT1
DUSP1
DLAT
GYPA
CYP51A1
TNFAIP8L1
ZSCAN25
TMEM167B
NUP205
ZSCAN31
KCNAB2
PFDN4
KPTN
HNRNPH1
FUS
USP54
PCGF5
PPP2R5A
RIMBP3
AP3S2
IMPA1
NRL
DCAF11
PUS7L
IRAK4
RABEP2
PHF12
PRR19
PAFAH1B3
DAB2
CTDSPL2
TRIM5
SLC46A3
PSRC1
MTOR
STX6
NCAPG
ATG16L2
SLC45A4
NEK2
ARCN1
MYADM
L3MBTL3
SDF2L1
FAM156B
FAM156A
BLVRB
COASY
AGBL3
CLTCL1
SPRING1
RNFT2
WDR5
STARD10
GTF2IRD2
CAT
FAM200B
TMEM222
RFC5
CCNT1
CDIPT
STK40
HLTF
C16orf46
RPS14
DOHH
MDM4
DPY19L4
TIMM10
KDM5C
RFX5
HCFC2
GLT8D2
PTGES2
PPIH
ZBTB40
SRFBP1
STXBP4
COX11
OTUD3
KIF23
GRAP2
KAT5
TRIP4
TBC1D30
GNS
TRIM28
ZNF524
FIZ1
NSUN4
NNMT
ZCCHC24
TMEM191B
PNISR
KRT18
DNAJC28
SNX24
MTIF2
NUP155
PPIL4
ACSL1
MAPK1
DUSP18
CENPN
BMS1
ZMPSTE24
SKIV2L
NELFE
SLC38A8
MRPS15
ELOVL6
PDXDC1
RAD21
SLC25A37
IKBKG
H2BC18
TSC22D2
OR52A1
PTMS
GAL3ST4
TMPPE
GLB1
SFSWAP
SHB
LSR
GALK2
COPS2
EIF2D
CCAR2
RBM28
AHCTF1
ZBTB21
COMMD4
COPS4
HEMK1
ZBTB8OS
RBBP4
ZKSCAN2
ILKAP
GTPBP3
APRT
YTHDF2
SETD1A
DCLRE1B
AP4B1
BCAS3
LENG9
FAM104B
UBE2I
BSDC1
ASXL1
EOLA2
ATP13A3
NUDCD3
AHI1
OCIAD1
H4C12
MRPL44
TUT1
DNAJB6
BMF
UNKL
HEXA
TRMT1
LARP1
C19orf48
DGCR6L
DDX39B
ETFDH
C4orf46
GPN3
FAM216A
NUMBL
NRSN2
TFPT
PRPF31
GSDMD
PIGM
GAGE2C
GAGE2B
GAGE2A
TTC39A
TARDBP
ZCWPW1
MEPCE
ERGIC2
S100A13
CHTOP
DDX18
RIOK1
CAGE1
SIRT3
PSMD13
FOXP4
EFTUD2
CCDC103
TGIF1
IPO13
ZDHHC12
NUDT9
WDR73
RELA
NUP107
LUC7L2
PPP1R37
API5
WDR13
NRDC
TMEM37
CDC20
HPS5
GTF2H1
RPL5
YIPF3
POLR1C
MYL6
ZNF280A
MCOLN1
EIF3F
CD55
INTS7
DTL
HNRNPD
TOMM6
ISOC2
ALG8
SEC61B
ALG2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
ICE2
ASB6
PPCDC
ZNF391
RPS19
TMED7-TICAM2
TMED7
ZW10
SUMF1
HSPBP1
SRSF10
WFDC3
DNTTIP1
PRTN3
ZWILCH
RPL4
DAXX
PSMA1
EXOSC5
BCKDHA
ABCF3
CAB39
USE1
ZSCAN32
ZNF174
COA6
CPQ
SPOCD1
EVI5L
MSTO1
MAP1LC3C
CEP164
THRAP3
SLC9B1
NR6A1
SLC25A45
ITFG2
SAYSD1
MRPS28
ZFAND3
USP2
ITGB1BP1
CPSF3
GCLC
HSPA9
CDK11A
SLC39A9
ERH
UTP25
NFE2L2
UBIAD1
SLC25A16
FBXO8
CEP44
RBL1
YTHDC1
HARBI1
ATG13
USP30
NOL11
IGF2BP3
HDAC8
UQCC2
RIPK2
MYO18B
AAAS
DCAF10
WDR55
DMXL1
BRAF
CDCA7
CPPED1
YIF1A
UQCC3
LBHD1
MRTO4
EMC1
GPATCH3
TTC31
CCDC142
PSMC3
RC3H2
PTPN4
C21orf91
TAL1
TADA3
ARPC4-TTLL3
ARPC4
MRPL45
HAGH
FAHD1
ZSCAN22
GTF2H2C
GTF2H2
STX4
CXXC1
NRAS
NFYC
DNAH2
ATF2
PPME1
CREB3L3
C2CD3
ZZZ3
ELAPOR2
UMAD1
PEX3
ADAT2
STAM2
DRG2
OR8G2P
RMND1
ARMT1
ATXN7L2
MED20
BYSL
DUS3L
POLR3B
TXN
RPSA
OXSR1
RPL10A
MUC1
NAF1
CACFD1
ERAL1
UTP20
SYS1
LRIG2
IFTAP
DLD
ZNF562
ZNF473
WDR45
VRK3
FAM86B1
DARS1
NCSTN
COPA
FAM207A
SUCLG1
KLHDC10
MFAP3L
TIMM44
POC5
ADNP
PICALM
G0S2
PRMT3
TBL3
MRPL1
RPS7
RPL27
NFX1
CFAP298-TCP10L
CFAP298
SYCP2L
STRIP1
ARHGEF1
RILP
ZNF846
PRELID3A
ZNF442
FDX2
PSMB7
TAF6
CNPY4
VARS1
RSPH14
PTCD1
CPSF4
TBX19
CDK4
CCDC124
TMCO1
MRPS18C
HELQ
ANKRD13A
KMT5A
DDX59
FSIP1
SLC26A6
NDUFB2
FBXL13
ARMC10
PEAK1
HMG20A
RPL23A
DYNC2I2
AJUBA
BIRC6
HDAC5
PRXL2B
TMEM128
S100A2
KMT2D
CACYBP
GRWD1
RTL10
GNB1L
NAA38
SLC38A2
PDE4A
IST1
VWDE
EHBP1L1
CYB5D1
CCT5
ATPSCKMT
SPNS1
POLR2J2
FMC1-LUC7L2
FMC1
SZRD1
LRPPRC
RPS2
NUF2
TMEM39B
TIPIN
KIFC1
EBNA1BP2
CFAP57
HIPK3
SAMD1
RAVER1
FRAT1
RPUSD4
FAM118B
DMAP1
RABGEF1
RFXANK
BORCS8
YIPF2
TIMM29
RPF1
COL1A1
CNOT10
BAK1
TBRG4
ESCO1
INTS4
UBXN10
PLA2G2C
CDK9
VPS28
UQCRC2
SYCN
PRPF8
B4GALT3
PFKM
SENP1
TTC32
CBWD5
CBWD3
SS18
PPP4R3A