ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976680 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◣ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L8
MTRNR2L2
GRB7
TMEM199
POLDIP2
CRBN
UBE3B
GRHL2
ERAL1
SFSWAP
TOMM22
MRPL45
RGPD2
RGPD1
PSMD3
STARD3
ISY1-RAB43
ISY1
RBM48
PEX1
POLR2J3
MTBP
MRPL13
GET3
SLC45A4
RBBP8NL
PGAP3
ERBB2
UNC13D
SUPT6H
SDF2
TSR3
GNPTG
KAT8
LZTR1
STAT6
TOP3A
SMCR8
SLIRP
ALKBH1
SEMA3B
POLR2J2
C1orf174
SALL4
HEXA
TET3
HES1
TSFM
SAP30BP
RECQL5
ATP5MF-PTCD1
ATP5MF
MOCS3
DPM1
TRIB1
VPS50
HEPACAM2
ZNF335
UBE2I
TXN2
DMAC2
SRI
POLR2J
DNAJC11
RBBP5
PDAP1
BUD31
GFM1
PSMD1
MRPS15
SOCS2
RTF2
MIEN1
SMN2
SMN1
RPS26
MRTO4
EMC1
CCDC97
NCBP2AS2
NCBP2
AXL
DDX23
UPK3B
NEURL2
CTSA
MTRNR2L9
ABCB8
NAGPA
ZNF830
CCT6B
IDH3B
LRRC47
TJP2
YAP1
SLC25A45
C8orf33
MED6
BLOC1S1
INO80D
PDCD6IP
SNRPE
MRPL10
LRRC46
LAMP1
TBRG4
CDKAL1
ZZZ3
PALB2
DCTN5
NGDN
MAP3K7
EIF3H
PRPF6
SEPTIN9
PPWD1
CENPK
TMEM208
LRRC29
CENPBD1
TRMT2A
RANBP1
RPTOR
SLC35B1
STX16
SUPT7L
SLC4A1AP
DDX46
RPL23A
SPNS1
WASHC5
NSMCE2
THAP7
BHLHE40
NDUFA2
IK
SUMF1
C16orf91
ZSCAN25
ZNF408
ARHGAP1
ELP3
TAS1R1
NOL9
POLR3F
DZANK1
C5orf51
LAMTOR1
ZNF165
PHAX
PSME3
FUT1
ITFG2
ATG14
MAN2C1
PFKM
ZNF383
SENP1
ZFYVE26
REXO1
NDUFA9
AKAP3
CLPTM1
KRR1
LTO1
SLC25A53
CD55
RAE1
KMT5B
DIABLO
XAB2
NDUFA4
UBQLN1
NEMF
NOM1
PEPD
GSN
MRPL58
NR1H2
HAGH
FAHD1
ZNF2
NVL
PSMG2
CEP76
RCE1
PFDN1
CASC3
VPS52
RPS18
TRMT1
CCDC124
NOC2L
NOL10
METTL2A
LRFN4
ZNF576
IRGQ
ZCCHC4
ZCCHC10
NOP16
HIGD2A
TRMO
U2SURP
NOL8
CENPP
SUPV3L1
TRUB2
COQ4
GPRC5A
ZGPAT
ARFRP1
PSMB7
VIRMA
GATB
PRR3
GNL1
THUMPD1
GPATCH3
CBLL1
ZSCAN22
STYXL1
SART3
ISCU
COLEC12
SENP5
DDX41
TRAF4
TMEM203
NDOR1
RWDD1
NXT2
CASP8
ZNF507
BRWD1
MB
ZG16B
DNAJC30
BUD23
TIMM22
TFPT
PRPF31
BIRC3
DOHH
TCTEX1D4
BTBD19
TATDN3
NSL1
FAM83A
PRSS22
CPSF1
LRATD2
BRPF1
EVPLL
SART1
ZDHHC6
VTI1A
DPP3
GTF2IRD2B
GABRR1
TOMM6
TBC1D15
CLCN7
CCDC59
NUP214
TSN
VGLL4
HEMK1
PTP4A1
GTPBP4
NCAPH2
LMF2
SEC61B
ALG2
VPS33A
CDK12
VAC14
EXOSC5
BCKDHA
MRPS7
GGA3
OXNAD1
DPH3
HTRA2
PCYT1A
COLEC11
LANCL2
GCN1
KMT2A
LCN2
HUS1
CNPY2
PMPCB
SETD3
CCNK
TBL1X
DOK7
EPS8
ZNF212
BABAM1
IL1RN
RTEL1
TBL3
SLPI
SURF2
SURF1
EIF2D
CCNT1
NHP2
SEMA5B
WDR24
NDUFB5
MRPL47
RIN1
MRPS11
MRPL46
MAF1
RCOR3
TXNL4B
DHX38
PSMC3
FUBP3
TNPO3
EIF2S1
ATP6V1D
ABT1
TIMM50
TMEM258
FEN1
MED23
PIK3C2B
ZNF668
BIRC2
MRPL21
IGHMBP2
FASTKD2
ZNF646
SYBU
FLOT2
NFKBIA
INTS1
NSA2
GFM2
TAGLN2
ALKBH3
BMS1
ATF3
TMEM40
PNO1
TCERG1
SNIP1
CLDN22
AP5Z1
ZNF524
FIZ1
ATG101
ORAI3
KLK6
MRPL38
FAM222B
SMPD4
MZT2B
GOSR2
DDX19A
DNAJB12
P3H4
FKBP10
NUP107
DGAT2
KMT5C
RASEF
KRT17
COMMD2
NOL11
UQCRQ
GDF9
UBE2M
OST4
SKIL
API5
FOXS1
RNF207
DHRS3
SMG8
FOS
STK19
DXO
MAD2L1BP
NOP58
AMDHD2
PARG
SNRNP200
CDKN2AIPNL
COX16
CHRM3
TFAP2C
FANCD2
MAGOH
E2F4
THOC1
YJU2
RAD51AP1
C12orf4
SF3B3
COG4
TMEM41A
SCAF11
ICE1
VPS11
CACTIN
EFTUD2
CCDC103
ADPRS
SMG7
OAZ3
MRPL9
LEKR1
SLC30A6
RABGEF1
WDR53
FBXO45
RPL26L1
DNAH5
PES1
SRP19
SLC39A9
ERH
CD63
PPIL4
RICTOR
PDRG1
MDM4
SLC7A6OS
PRMT7
SUGCT
MPLKIP
FBXW2
DDX49
COPE
FEM1A
METTL2B
RBPJ
RBSN
SMIM12
TP53I3
PUS10
PEX13
SEC13
GID8
DIDO1
CDK11A
ECH1
SRD5A1
ATP6V1G1
DUS2
DDX28
TIMM23
MRPL3
POC1B-GALNT4
PLEKHG6
SSNA1
ANAPC2
MTIF2
PIKFYVE
CZIB
SRP68
LENG8
DUSP6
EIF1AD
BANF1
GAR1
DHRS13
MRPL53
FSCN1
ATP6V1H
FADD
MORF4L1
RBM25
MRPL1
EIF2B2
NUDT5
CDC123
BAG6
RUSF1
RNPS1
ALDH18A1
HNRNPA2B1
CBX3
GET4
SLC39A10
EPC2
WDTC1
DDX17
EIF4G2
NUDT3
STRBP
SLC25A25
NAIF1
GABARAP
SEPTIN7
WASHC2A
KAT5
WASF2
WASHC2C
UBE2Q1
GPR137
BAD
CDK4
GSK3B
ATP6V0D1
RSF1
AAMDC
MSMO1
RPGRIP1L
FTO
DAGLA
MDM2
CUTA
SMARCD2
USP49
DDX42
CCDC47
SRSF1
RPUSD4
FAM118B
GBA
ILF3
SERPINI1
PDCD10
COMMD9
MTHFR
CLCN6
MAN1B1
FAM72C
SRGAP2B
FAM72D
OSGEP
APEX1
SLC35A5
ATG3
UVRAG
MCOLN1
FANCA
AURKAIP1
RAD9A
SRGAP2
FAM72A
XPO7
CLN3
HPS5
GTF2H1
INO80C
MFSD1
PPP6R1
NME1-NME2
NME1
SLC4A2
DVL2
PAXBP1
PCIF1
CEP162
UBE3C
ARHGAP32
WWOX
SLC25A11
RNF167
ATAD2
PMS1
ORMDL1
ZBTB45
MEF2C
MEMO1
FLOT1
PTBP1
UBE2B
CDKL3
PIP4P1
CLSTN1
GP1BB
INTS10
SH3GL1
SUMO3
WBP2
E2F6
TRIP4
ANKS6
UBAP2L
C1orf43
SSBP1
ADGRB3
MOB1B
MIER1
DAZAP1
RRP15
SHLD2
GLUD1
HNRNPH2
SUSD4
ST7
TNC
KANSL3
SLK
SRGAP2C
KCNMA1
FAM72B
FGGY
SUMO2
TPP1
ALG6
HM13
SCAMP5
WDR62
THAP8
OTUD7A
THRAP3
USP30
XRCC5
SLC33A1
ADAM23
SPATC1L
STX6
TBC1D30
GNS
SMARCA4
RAB3IP
LARP1
TMEM116
ERP29
ADGRL1
LIMA1
ITGB3BP
EFCAB7
STAU2
RABGAP1L
RALGDS
EIF5A2
BLOC1S4
DENR
PPP5D1
CALM3
MYCL
PRMT3
ACVR1B
NUDCD3
DICER1
BAX
ZNF497
RXRA
SBK1
FAIM
NSD1
SPHK2
RPL18
KDM3A
QRICH1
NPEPPS
SCYL3
RMND1
ARMT1
ARID5B
PSMD5
EIF3F
PLAGL1
KDM1A
AP2A2
SF3A3
KDM7A
TFDP1
VWA7
LPCAT3
LMAN2
GRHL1
NDUFAB1
FLYWCH1
TMEM18
PEAK1
METTL1
HMG20A
EEF1AKMT3
HDAC6
CBX7
STRA6
SAP30
ATP6V1C1
PRKCA
NEXN
LSG1
DIP2A
UBE2E2
SFXN1
RRAGC
KDM4C
FASN
NDUFS7
SPTAN1
REEP4
PRAME
SH2B1
RPS11
LUC7L2
TMEM59
SYNCRIP
KRT80
TM2D2
ADAM9
SERP1
EIF2A
NUF2
BNIP1
HOOK2
TTC32
CHD7
PLEKHF2
HOXC13
MINDY2
FBXL3
DNPEP
CAPRIN2
C17orf58
MAN2A2
CHIC2
CACNA2D2
CHMP7
NFU1
USP28
PHF21A
MYL12A
ACTN4
KDSR
WWP1
AAAS
RNASEK
BACH2
FMC1-LUC7L2
FMC1
PATZ1
JMJD1C
CFAP206
RPS14
NAPA
IKZF2
AIFM1
DTNB
FAM133B
MAZ
IGF1R
COPS7B
KLHL12
LRRC23
USF2
RFX1
SYT7
CUTC
COX15
THAP6
HSPBP1
GTF2H4
UBE2L3
PHIP
GTF3C5
PRKCE
WBP1L
CSTF1
AURKA
S100A2
DPP8
ATXN7L3
ADCY9
UBXN2A
CHD1
URM1
LASP1
UTP3
ETV4
PTK2
ATXN7L2
ZCWPW1
MEPCE
MSS51
PXT1
KCTD20
FCHSD2
AFF4
RPL5
CABIN1
IFT140
CRAMP1
NFASC
CCDC174
SPRTN
EXOC8
ZNF17
IRF2BP2
BSG
MAP3K1
EFNA3
HSPA9
COASY
TTC31
MARCHF2
CCDC142
TSC1
GFI1B
C1QTNF1
COMMD4
RBKS
BABAM2
PSMA1
FRMPD1
PTPN12
EIF4A2
BRIX1
LYPLA1
FAM162A
CCDC58
FAM98B
SLC24A1
INTS14
OAZ1
FZR1
ZNF3
TAOK1
GOLGA3
PHB2
MAPKAPK3
KLHL32
GFER
KMT2D
UPF1
ZMPSTE24
PTPRG
PKP2
ZBTB14
ZC3HC1
CTBP1
TRIQK
LCOR
TMEM242
CCNI
REXO4
TMEM167B
ZNF217
CSTF2
MELK
MAST2
LYPLAL1
GAB2
CCDC88A
AP3S2
CBX6
C19orf48
NDUFB3
FAM126B
GTF2H3
EIF2B1
CCAR2
ZNF609
KAT6A
PTBP3
MAPKAPK5
ZBTB18
MLLT10
RBM19
NDUFS3
KBTBD4
MRFAP1
SPPL3
ERGIC2
ELAPOR2
CMIP
MED1
EIF4H
OBSL1
INHA
PKNOX1
SGO1
WDR74
PTP4A3
AUTS2
ARMC8
PTCD3
POLR1A
CFAP36
TEFM
C12orf66
LIFR
COPS4
RBM14-RBM4
RBM14
GNB1
TIPARP
BHLHB9
PPP2R5A
PVALEF
AATK
SNRPC
ERCC6L2
ULK4
THAP1
HERC5
STAT5B
RYK
PARD6B
GTF2A1
SLX4IP
POMZP3
CRKL
SMURF1
ZNF292
PPP2R3B
ARPC2
MED20
BYSL
SRSF6
IQCG
YTHDF2
COMMD8
ATOH7
FEZ1
NFE2
ALG14
AMOTL1
GSDMD
TMEM266
MRPS33
VILL
MRPL40
HIRA
FBXL5
RABEP1
P4HB
ATG9A
ANKZF1
SGTA
MRPL27
EME1
RALGPS2
ELP5
CTDNEP1
NF2
HHAT
CACYBP
C3orf70
AMMECR1
MCM7
AP4M1
SNX19
ARRDC3
BTBD3
TJP3
KLF16
TENT2
SYT12
TOR1AIP1
AVEN
NEK6
TM9SF4
BRF2
ZNF451
SLC6A6
OPA1
MTF2
ADARB1
TRAPPC2L
TCTA
RPS7
RHOA
GALNS
SREK1IP1
CWC27
KIAA1586
EXOC6
SNX12
PLSCR1
ZRANB2
PIK3R3
CAPS2
PPP1R37
SIAH1
RNFT1
DUS3L
RBM28
CHEK1
GLCCI1
C20orf141
PHF3
FUT10
TSPAN7
RUVBL1
PAPSS1
NR4A1
GTF2H2C
WDR89
TPD52L2
THAP12
GVQW3
GRWD1
TRIM37
TMCC1
LFNG