ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10045307 | LNCAP
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◣ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

GET4
HEXA
UBE2Q1
CDK4
CUTA
AP5Z1
ILF3
HPS5
GTF2H1
UVRAG
LAMP1
KAT5
OSGEP
APEX1
RPL5
SPATC1L
ATP6V0D1
WASHC2C
WASHC2A
PGK1
COMMD9
MTHFR
CLCN6
CTDP1
SPNS1
YJU2
TRMO
THRAP3
PIP4P1
KDM4C
NDUFS7
EIF2S1
ATP6V1D
WDR62
THAP8
TOR1AIP1
UBE2B
CDKL3
RPUSD4
FAM118B
HOOK2
CHMP7
CCDC90B
CLN3
DVL2
MTRNR2L8
HDAC2
MED11
PLAA
IFT74
RNASEK
CSDE1
TMEM259
TPP1
ITFG2
LTA4H
HAGH
FAHD1
TPR
ODR4
C8orf37
UBAP2
FNTB
SMG7
FEM1A
FBXL19
CACYBP
PIK3R3
ZNF672
AFF4
DUS3L
LARS1
PPRC1
ARF4
FANCF
CEP162
OXNAD1
DPH3
GBA
SLX1B
SLX1A
BOLA2B
BOLA2
GSTA4
PDXDC1
ATL1
MAP4K5
MSL2
RPS29
RAD9A
SHC1
CKS1B
VPS33A
MTF2
PRKCI
NME1-NME2
NME1
NUF2
MLH1
EPM2AIP1
MTRNR2L2
KLHL12
THG1L
PHLPP1
SLC35A4
APBB3
RFXANK
BORCS8
TMEM116
ERP29
CHD1
VEZT
FGD6
ATP5MC2
GABPA
ATP5PF
CDIP1
GTPBP8
TMED4
USPL1
HMGB1
HACD2
SLC38A7
NSUN4
QTRT2
CCDC191
EFHC1
LONP1
CATSPERD
STX5
EED
CEP70
USP35
KCTD21
GOSR2
ALG14
ZSCAN22
CUL5
RPS27
ZNF140
RPLP2
MMADHC
ISY1-RAB43
ISY1
SNRPE
TFPT
PRPF31
ZMPSTE24
B9D1
FRMPD1
TIMM17A
GLIPR1L2
TIMM10B
ARFIP2
SESN1
CEP57L1
RPL27
CBWD5
SLC35A5
ATG3
PRORP
PPP2R3C
EIF2AK3
BOLA2-SMG1P6
CCDC146
LAMTOR5
CDK19
AMD1
CLSTN1
PMVK
PPIP5K2
GIN1
TSACC
CCT3
LANCL2
NCBP2AS2
NCBP2
BAG6
PCYT1A
UBQLN1
SLC33A1
METTL1
EEF1AKMT3
PIGO
C5orf51
CPEB4
UBAP2L
C1orf43
CYCS
CCT2
ESCO1
TIMM13
TUFT1
PPP1R2
TIMM22
AATF
USE1
NUDT15
TMEM242
H4C15
H4C14
TTI2
C16orf91
NSA2
GFM2
CCNL1
SP2
TOGARAM1
KLHL28
INTS8
RFX1
TM9SF4
FUS
UFSP2
ATP5MF-PTCD1
ATP5MF
TASP1
TNFRSF19
HSPA5
SLC35B1
ARL14EP
PRMT2
HOXC13
SIRT4
WDR36
NCSTN
COPA
USP42
MFSD1
TTC32
THAP6
MRPL54
ACAD9
APBA3
DAD1
CCDC59
PPOX
WARS2
ATP6V1G1
BMS1
BHLHB9
IQCG
EIF3E
LMLN
PMF1-BGLAP
PMF1
DBT
SRPRB
BNIP3L
GBE1
FITM2
IDE
SCAF11
TIPARP
INTS7
DTL
C10orf88
DUSP12
SUPV3L1
VHL
PDCL3
PEF1
MTBP
MRPL13
C12orf66
RINT1
CLTC
EIF4G2
CLPB
TBRG4
PPP2R5A
SEC31A
ARIH1
RPS26
RPL21
OXSR1
DCAF8
GOLGB1
SPG11
MRPL45
AP2B1
STMP1
PRCC
ORC4
MBD5
STAM
SKA3
MRPL57
SMIM4
NEURL2
CTSA
RAB5B
CBWD3
HSPH1
H2AC19
H2AC18
TMX2
MED19
SDR39U1
ZCCHC7
PDE4DIP
SF3A3
SERF2
EIF3F
EEF1AKNMT
KLHL32
NDUFAF4
SLC35E2B
ABHD14B
ABHD14A-ACY1
ABHD14A
TESK1
RPL22L1
EXD1
CHP1
PSMC4
WDR89
NFX1
FIS1
EIF3L
ANKRD54
NDUFA6
DARS2
CENPL
PPP2R1A
SMIM13
TVP23B
INO80C
UFD1
CDC45
ATG5
MOK
C17orf97
GTF2H4
SRP9
N4BP2L2
ORC2
GTF2H2
GTF2H2C_2
ARMC5
OSCP1
ECH1
CHEK1
SRFBP1
CCDC15
TMED10
LOC101928764
EID1
FBXL18
KAT7
TTC37
ARSK
PDE12
NUP214
SSBP1
DDX18
RFC2
PPIG
LUC7L2
FMC1-LUC7L2
FMC1
RRM1
MRPS7
GGA3
SELENOH
HMGB2
SETD4
CEP350
RETSAT
ALDH18A1
GRB7
HNRNPA2B1
CBX3
SLC39A10
EPC2
WDTC1
SLC45A4
DDX17
NUDT3
STRBP
SLC25A25
NAIF1
GABARAP
SEPTIN7
TMEM199
POLDIP2
WASF2
ERAL1
GPR137
BAD
POLR2J3
SFSWAP
GSK3B
NAGPA
RSF1
AAMDC
MSMO1
CRBN
RPGRIP1L
FTO
RGPD2
RGPD1
UBE3B
RBBP8NL
RBM48
PEX1
DAGLA
GRHL2
PSMD3
MDM2
SKIL
SUMF1
RAE1
CLCN7
HES1
SMARCD2
USP49
TOMM22
C1orf174
DDX42
CCDC47
SRSF1
SUPT7L
SLC4A1AP
C8orf33
STARD3
TRIB1
ZZZ3
POLR3F
DZANK1
SERPINI1
PDCD10
RBBP5
SOCS2
MAN1B1
STX16
LZTR1
STAT6
TSR3
GNPTG
THAP7
VPS50
HEPACAM2
UNC13D
BHLHE40
FAM72C
SRGAP2B
FAM72D
MIEN1
ZNF335
PGAP3
ERBB2
TBL1X
TRMT2A
RANBP1
MCOLN1
FANCA
PSMB7
POLR2J
CLPTM1
AURKAIP1
SUPT6H
SDF2
IDH3B
BLOC1S1
SMN2
SMN1
DMAC2
SRGAP2
FAM72A
WASHC5
NSMCE2
MOCS3
DPM1
VIRMA
TET3
POLR2J2
ZNF408
ARHGAP1
ATF3
SALL4
XPO7
MRTO4
EMC1
SRI
PDAP1
BUD31
SLC25A53
TSFM
GET3
TOP3A
SMCR8
PFKM
YAP1
CDKAL1
SLC25A45
PPP6R1
ZNF165
SAP30BP
RECQL5
CASC3
DOK7
SLC4A2
SLIRP
ALKBH1
PAXBP1
TRMT1
PCIF1
U2SURP
ZNF383
UBE3C
ZDHHC6
VTI1A
AMDHD2
EIF2D
SENP1
CDK12
ARHGAP32
FLOT2
TAS1R1
NOL9
WWOX
SLC25A11
RNF167
AXL
ZSCAN25
ATAD2
PMS1
ORMDL1
MTRNR2L9
ZBTB45
GATB
MEF2C
GFM1
MEMO1
FLOT1
MRPS15
FAM83A
PTBP1
KRR1
HUS1
RTF2
DDX41
DNAJC11
NUP107
ZNF668
VAC14
GP1BB
INTS10
KAT8
SH3GL1
NDUFA2
IK
SUMO3
WBP2
E2F6
NDUFA4
PHAX
ZNF576
IRGQ
TRIP4
CCNT1
ANKS6
SEMA3B
ADGRB3
MOB1B
CCDC97
MIER1
DAZAP1
RAD51AP1
C12orf4
RRP15
PSME3
UBE2I
SHLD2
GLUD1
HNRNPH2
SUSD4
ST7
TNC
KANSL3
SLK
SRGAP2C
KCNMA1
FAM72B
TJP2
FGGY
SUMO2
NGDN
ALG6
HM13
SCAMP5
PPWD1
CENPK
OTUD7A
USP30
XRCC5
BIRC3
ADAM23
TRAF4
EPS8
RPTOR
ABCB8
SEPTIN9
STX6
TBC1D30
GPATCH3
GNS
SMARCA4
RAB3IP
ATG14
LARP1
TXN2
ZNF2
TSN
PSMD1
DHRS13
ADGRL1
VPS11
LIMA1
ITGB3BP
EFCAB7
CACTIN
STAU2
ZNF524
RABGAP1L
FIZ1
ELP3
RALGDS
EIF5A2
TMEM208
LRRC29
BLOC1S4
DENR
PPP5D1
CALM3
MYCL
PRMT3
RTEL1
ACVR1B
NUDCD3
DICER1
MAP3K7
MRPS11
MRPL46
BAX
DUSP6
ZNF497
RXRA
SBK1
FAIM
NSD1
ZCCHC4
SPHK2
RPL18
KDM3A
QRICH1
TRUB2
COQ4
NPEPPS
OAZ3
MRPL9
SCYL3
RMND1
ARMT1
ARID5B
PSMD5
FSCN1
TNPO3
PLAGL1
KDM1A
AP2A2
KDM7A
GPRC5A
TFDP1
DDX23
VWA7
NOL8
CENPP
LPCAT3
LMAN2
GRHL1
PUS10
PEX13
NDUFAB1
FLYWCH1
TMEM18
EIF1AD
BANF1
NOP16
HIGD2A
DNAJC30
BUD23
PEAK1
HMG20A
DDX46
DPP3
HDAC6
CBX7
STRA6
SAP30
ATP6V1C1
STYXL1
PRKCA
NEXN
LSG1
DIP2A
UBE2E2
SFXN1
RRAGC
UPK3B
FASN
SMG8
NVL
SPTAN1
REEP4
METTL2A
DGAT2
ATP6V1H
PRAME
MRPL10
LRRC46
SH2B1
RPS11
TMEM59
SYNCRIP
DHRS3
KRT80
TM2D2
ADAM9
LTO1
SERP1
EIF2A
COX16
PDCD6IP
NFKBIA
BNIP1
TMEM203
NDOR1
CHD7
ZNF507
TMEM40
BRPF1
ATG101
PLEKHF2
MINDY2
FBXL3
DNPEP
PRR3
GNL1
SART3
ISCU
ZGPAT
CAPRIN2
C17orf58
ARFRP1
MAN2A2
CHIC2
ZNF830
CCT6B
LRFN4
CACNA2D2
NFU1
MAN2C1
USP28
PHF21A
MYL12A
ACTN4
PSMG2
CEP76
KDSR
NDUFB5
MRPL47
WWP1
SF3B3
COG4
SSNA1
ANAPC2
AAAS
EIF3H
BACH2
FOS
PATZ1
JMJD1C
CFAP206
RPS14
NAPA
TFAP2C
IKZF2
AIFM1
KMT5B
DTNB
CENPBD1
FAM133B
MAZ
IGF1R
DNAH5
COPS7B
LRRC23
METTL2B
USF2
SYT7
INTS1
CUTC
COX15
HSPBP1
UBE2L3
GABRR1
PHIP
GTF3C5
PRKCE
MB
WBP1L
CSTF1
AURKA
TBL3
S100A2
DPP8
NDUFA9
ATXN7L3
AKAP3
FAM222B
ADCY9
VPS52
RPS18
UBXN2A
PRPF6
URM1
LASP1
VGLL4
UTP3
MRPL1
ETV4
PTK2
ATXN7L2
ZCWPW1
MEPCE
XAB2
SEC13
RBPJ
MSS51
PXT1
KCTD20
FCHSD2
COMMD2
CABIN1
IFT140
CRAMP1
NFASC
CCDC174
SPRTN
EXOC8
ZNF17
TMEM41A
IRF2BP2
BSG
MAP3K1
EFNA3
HSPA9
COASY
TTC31
MARCHF2
CCDC142
TSC1
GFI1B
C1QTNF1
COMMD4
RBKS
BABAM2
PSMA1
WDR53
FBXO45
PTPN12
GCN1
EIF4A2
BRIX1
LYPLA1
FAM162A
CCDC58
FAM98B
DNAJB12
ABT1
SLC24A1
INTS14
OAZ1
FZR1
ZNF3
TAOK1
GOLGA3
PHB2
MAPKAPK3
GFER
KMT2D
BIRC2
UPF1
TIMM50
RPL23A
PTPRG
PKP2
ZBTB14
RCE1
LRRC47
ZC3HC1
MRPL21
IGHMBP2
LAMTOR1
CTBP1
TRIQK
LCOR
CCNI
PES1
REXO4
TMEM167B
ZNF217
CSTF2
CNPY2
MELK
MAST2
LYPLAL1
GAB2
CCDC88A
AP3S2
CBX6
C19orf48
NDUFB3
MED23
FAM126B
GTF2H3
EIF2B1
EXOSC5
BCKDHA
PRSS22
CD55
CCAR2
SUGCT
MPLKIP
ZNF609
KAT6A
DIABLO
PTBP3
RWDD1
MAPKAPK5
ZBTB18
MLLT10
RBM19
NDUFS3
KBTBD4
COLEC11
MRFAP1
REXO1
PMPCB
SPPL3
ERGIC2
ELAPOR2
CMIP
MED1
EIF4H
OBSL1
INHA
PKNOX1
PNO1
SGO1
WDR74
PTP4A3
AUTS2
ARMC8
PTCD3
POLR1A
CFAP36
TEFM
SEMA5B
LIFR
COPS4
RBM14-RBM4
RBM14
GNB1
TAGLN2
TCERG1
PVALEF
KMT5C
AATK
SNRPC
MTIF2
ERCC6L2
ULK4
THAP1
HERC5
ALKBH3
STAT5B
RYK
PARD6B
GTF2A1
SLX4IP
POMZP3
CRKL
SMURF1
ZNF292
TXNL4B
PPP2R3B
DHX38