ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976678 | KYSE-410
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◣ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L8
GRB7
MTRNR2L2
ERAL1
SLC45A4
RBBP8NL
TMEM199
POLDIP2
MTBP
MRPL13
SLC35B1
GRHL2
SFSWAP
NAGPA
MRPL45
RBM48
PEX1
CRBN
C1orf174
ISY1-RAB43
ISY1
PSMD3
C8orf33
MIEN1
UNC13D
POLR2J3
STARD3
TET3
TOMM22
SMN2
SMN1
PGAP3
ERBB2
SUPT7L
SLC4A1AP
POLR2J
SKIL
IDH3B
CDKAL1
VPS50
HEPACAM2
GPATCH3
RPTOR
HES1
RGPD2
RGPD1
STX16
UBE3B
ZDHHC6
VTI1A
TRIB1
FLOT2
EIF2D
POLR3F
DZANK1
SOCS2
FLOT1
ZZZ3
GATB
PLD1
SLC25A45
PLAGL1
HAGH
FAHD1
SAP30BP
RECQL5
ABCB8
SNRPE
PSMB7
LAMP1
SUPT6H
SDF2
RBBP5
SPHK2
RPL18
TAS1R1
NOL9
GET3
ATF3
SALL4
WASHC5
NSMCE2
CLPTM1
BIRC3
SLC25A53
EIF3H
TMEM203
NDOR1
U2SURP
RAD51AP1
C12orf4
MRTO4
EMC1
EIF3F
NDUFAB1
KMT5B
MOCS3
DPM1
BHLHE40
RPS26
ATP5MF-PTCD1
ATP5MF
ZNF383
DNAJC30
BUD23
YAP1
RTF2
FAIM
ZNF830
CCT6B
EIF5A2
ATP6V1G1
PFKM
SENP1
TJP2
ELP5
CTDNEP1
TRMT2A
RANBP1
TFAP2C
FAM83A
LANCL2
SEMA3B
ERP27
TRAF4
PKP2
NGDN
HUS1
THAP7
TSR3
GNPTG
POLR2J2
NEURL2
CTSA
ZNF335
JRK
HEXA
PDAP1
BUD31
ZNF165
NFKBIA
BRPF1
TSN
OAZ3
MRPL9
STX6
DUS2
DDX28
SEPTIN9
GPRC5A
COMT
DDX41
RAB3IP
REEP4
WDR53
FBXO45
SF3B3
COG4
PES1
DHRS3
SUMF1
ZSCAN22
DMAC2
C16orf91
CCDC59
AXL
LRRC23
FAM162A
CCDC58
RNF39
SPNS1
REXO1
TIMM21
FBXO15
CCDC97
EFR3A
ZGPAT
ARFRP1
TSFM
KAT8
SLIRP
ALKBH1
INTS1
LTBR
EMC4
NME1-NME2
NME1
SMG8
OPA1
TBRG4
VAC14
LTO1
GOLGA3
KMT2D
TRMT1
FOS
NRDE2
C5orf51
ELP3
RPS11
EIF4A2
COLEC12
RTEL1
KRT80
FAM98B
SLX4IP
HR
TFPT
PRPF31
MAP3K7
GSDMD
DOK7
GABRR1
URM1
PRKG2
ITGB3BP
EFCAB7
HACD2
ZNF2
GUCA2A
NOL12
MRPS7
GGA3
UPK3B
MTA3
KCNG3
NPAS3
LZTR1
DPP8
SEMA5B
KIFC2
CYHR1
NUP107
OXNAD1
DPH3
TAF2
STAT6
ATG14
LMAN2
GTF2H3
EIF2B1
TOP3A
SMCR8
ABT1
ALDH3B2
SRI
DCTN6
MTRNR2L9
ATF6
MRPS33
BRF2
ITFG2
LSG1
BRIX1
EVPLL
RNF40
CCDC189
EPS8
SART3
ISCU
MB
TBL3
TRIAP1
RTN4IP1
QRSL1
ZNF408
ARHGAP1
MRPS35
SSNA1
ANAPC2
AAAS
GTF3C5
TTC31
CCDC142
GRK7
CCNT1
TRMO
MRPS11
MRPL46
DPP3
PRR15
DDX46
NDUFB3
FAM126B
EXOSC5
BCKDHA
PAXBP1
CACTIN
BNIP1
ENO3
ZCCHC4
PHAX
DDX23
SLC24A1
INTS14
ZRANB2
LAMA3
METTL1
EEF1AKMT3
TSC1
GFI1B
COLEC11
TCERG1
INO80D
ZSCAN25
NVL
CENPBD1
SUPV3L1
KRR1
SYT1
METTL2B
MAPKAPK3
CISH
RXRA
NDUFA9
AKAP3
MED1
SREK1IP1
CWC27
COPS3
MRPS15
COPS7B
GINS1
ZBTB45
SYNCRIP
RWDD1
APOBEC3H
TIMM22
TXN2
XAB2
HERC5
DNAJC19
NPAS2
DUSP6
NOP16
HIGD2A
NUP214
DNAJC11
STYXL1
CNPY2
NDUFS3
KBTBD4
POU5F1
ZNF256
PTK2
C12orf43
METTL2A
VPS33A
SERP1
EIF2A
ZMPSTE24
PNKD
PARG
TRIM6-TRIM34
TRIM6
MDGA1
CASC3
CEP162
NDUFA2
IK
ATP5MG
GFM1
MRPL21
IGHMBP2
ELAPOR2
PRPF6
CCDC174
CD55
DIABLO
MAPKAPK5
RPS21
GGA1
PPWD1
CENPK
DDIT3
SLC26A11
SGSH
ALG1L
BMS1
UBE2L3
HABP2
NUP54
MNAT1
UBQLN1
NDUFB5
MRPL47
VPS52
RPS18
ALDOA
CPVL
CHN2
NCAPH2
LMF2
HCAR2
AP5Z1
SMG7
USP30
NUDCD3
VGLL4
SEC13
GPBP1
PDCD6IP
HSPBP1
NDRG1
MRM3
GLOD4
MUC20
CDK12
PSMD1
LSM5
GPN1
CCDC121
KRT18
FEM1A
COMMD4
LMNA
TMEM69
PIKFYVE
ZNF260
ZFPL1
CDCA5
PHB2
TRIM29
SRRD
HPS4
RBX1
FAM133B
RPL23A
BCL3
ZBTB20
PAN2
PRKAR1A
ATAD2
TTC32
MINK1
PLEKHG6
MCC
EXD2
PCBP2
DOLPP1
PSMB6
EIF1AD
BANF1
PHF3
MED4
RPS12
RBM42
ASH2L
GOSR1
METTL3
ORMDL3
ZNF497
MRPL3
FGD3
SLC44A2
UBE2Q1
MED23
RBM19
FANCD2
WDR75
FBXO11
IFI16
FSCN1
MAN2C1
ZNF17
OBSL1
INHA
NUDT5
CDC123
CCDC77
KDM5A
KAT5
BAG6
DNAJB12
LRRC47
DOHH
AAR2
TSR2
COPZ1
SDHC
BLOC1S1
MCM7
AP4M1
BBS1
JADE2
KDM3A
AP3S2
RPL26L1
LONP1
CATSPERD
DSTYK
DLC1
TLE3
GID4
ATPAF2
ZNF3
IPO11
CEP63
ANAPC13
ARL14EPL
ANKRD22
XPNPEP3
ST13
NCBP2AS2
NCBP2
GLCCI1
RASEF
KRT17
ALG10
SENP2
ARMC1
TACSTD2
VIRMA
TMEM208
LRRC29
SH2B1
GTF2H4
KAT6A
MED20
BYSL
PIK3C2B
TPD52L2
PHF12
FBXW2
WDR83OS
WDR83
LZTS2
TRMT61B
MIDEAS
RPLP2
RPSA
METTL6
EAF1
CENPW
C1QTNF6
CIPC
MYL12A
RAB24
PRELID1
ENKUR
DNAH5
ICE1
ARL1
PIP4P2
ECH1
PRR3
GNL1
RPS14
SMG5
EFCAB14
MBD6
ZBTB6
LIMA1
ATG101
COPS4
EIF3E
UBOX5
FASTKD5
LYRM4
FARS2
TGFB1
C19orf48
TEFM
CDC23
GABARAPL1
RRP7A
PPP6R1
DHRS13
GCN1
ANXA3
NEMF
TNFAIP1
IFT20
HMGCL
TRIP4
MTO1
TFIP11
VPS37A
CNOT7
ZNF581
TMPRSS13
PALB2
DCTN5
EFTUD2
CCDC103
NSFL1C
PRDM1
TIMM23
KIAA1217
ERGIC2
GTF2H2C
GTF2H2
MED18
TTC6
FOXA1
SDCBP2
TMEM68
TGS1
ARHGAP32
CCAR2
PROSER1
NHLRC3
PPIH
RPS20
RPS16
RAD52
ALG10B
TOMM70
LNP1
EXOC5
AP5M1
ZNF503
BDP1
TRIQK
TXNL4B
DHX38
VILL
PTMS
ZNF250
GSTP1
DUT
TMEM40
RCE1
TMEM242
PRSS22
PPP1R37
NFKBIZ
ADPGK
MRPL12
UCKL1
HIRIP3
PNPT1
CWF19L1
CLASRP
SLC39A7
RXRB
PSME3
NDUFS7
FUT1
TINAGL1
SECISBP2
ZNF460
PSMD6
BCL9
COMMD1
ENDOV
CCT4
PINX1
FASTKD2
C2orf49
RPL21
TPGS1
API5
SCARB1
TM4SF4
NIBAN2
RAE1
LRFN4
TNRC18
CXXC4
CCZ1B
HAX1
LENG8
TP53I3
NAMPT
NDUFA10
DGAT2
UTP3
PNO1
TAGLN2
C2CD5
TBCK
AIMP1
FOCAD
PRR12
URB1
VWA7
CWC25
TBC1D17
AKT1S1
RFFL
TNFRSF12A
TARBP2
ADAP1
SNRPC
TSR1
ACAD9
MAP2K3
DHX16
ATP5MPL
POLD4
TNPO3
MCCC1
BORCS7
PPIL3
NIF3L1
ZNF76
FAF2
RILPL1
ZC3HC1
ALKBH3
CBLL1
PSMC3
TAF6
CNPY4
WDR24
MRPS21
ETV4
SLPI
PHF5A
ACO2
KLK6
PNMT
POLE3
C9orf43
TSC22D4
SAMD4B
SLC11A2
RBM28
PTP4A1
SLC9A8
FRMPD2
RPL13A
ZFP62
NOL8
CENPP
FAM222B
EIF2S1
ATP6V1D
XPC
LSM3
HTRA2
CCDC12
MRPS18A
TRIP6
LAPTM5
SUPT16H
SCAF11
GJB5
DDX19A
RPL26
ZNF394
HOXA3
PSMD5
RPS7
UNC50
COA5
XDH
SDHD
MAGOHB
KMT5C
ZFP64
PPFIBP2
COX16
REXO4
PGS1
DGCR6L
KCTD11
STAM
RASSF6
AMDHD2
TMEM41A
SSBP2
ZKSCAN2
MYNN
RNF19A
ZKSCAN4
TGFBR2
TTPAL
CIAO3
MCF2L
SAR1B
RP1L1
TMEM18
PSMG2
CEP76
PMPCB
AIG1
LEO1
NAT10
LCN2
DCP1A
ZMYND8
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
MTIF2
ACP3
TBCB
POLR2I
COMMD5
ZNF384
SLC30A4
GABPB1
UPP1
CCZ1
VIPR1
MAGEA2B
MAGEA2
PDHX
APIP
ZNF524
FIZ1
POR
FBXL18
BCL6
WBP4
ELF1
SRRT
SRP68
MRPL40
HIRA
ERCC5
ZWILCH
RPL4
IFT52
FGR
SLCO1A2
CHD8
COPS8
CTTN
RABL2B
PPP1R1B
TRAK1
ATP6V1H
FMN1
ZFP36L1
ZNF576
IRGQ
SSBP1
SYT12
CCNL1
TGFA
MAD2L1BP
VASP
GTPBP2
E2F6
COMMD2
MED6
MAGOH
ATR
WDR36
ZNF623
LNPEP
PEX26
FOXA2
MGST2
EMC8
COX4I1
PUS10
PEX13
S100A2
MFSD3
CSTF1
AURKA
TRAPPC9
KCTD5
ZCCHC3
ZNHIT1
PLOD3
ZNF696
TIPARP
CYP20A1
NAPA
SKIDA1
GSN
MFN2
FOXS1
LGALS8
HNRNPH1
LEKR1
SERPINE1
FBXL19
SRP9
WDPCP
MDH1
SUGCT
MPLKIP
ALG14
MAF1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
PLEC
DDX56
SPRY4
PDRG1
SYS1
MLST8
SEM1
PSMB2
ZNF770
NUS1
NCOA3
PEMT
HEATR1
CYBA
ATP5MC2
SETDB1
DTNBP1
LRP1
CYP1B1
YJU2
ZCWPW1
MEPCE
HSPA9
PGGT1B
STON2
TIMM50
UMAD1
SNRPD3
GUCD1
POC1B-GALNT4
SPDYE14
SPDYE10P
RMDN3
IQCG
RPL35A
SNRNP200
PRR19
PAFAH1B3
RNF223
GTF2IRD2B
ADRM1
TRIM35
PTK2B
IGFL4
SHLD1
SLC25A11
RNF167
SH2D4A
RABL2A
TAF9
RAD17
AK6
CLCF1
SPCS1
GLT8D1
CUL9
TRIM23
TRAPPC13
SHLD3
ARHGAP27
NUF2
DNAJA3
MRPS22
ZNF16
TOMM40
SCRN3
CIR1
GPANK1
CSNK2B
ERCC6L2
LRATD2
RAB5IF
PWP1
RCN1
SELENOH
RNF187
FCF1
AREL1
NBPF1
DNMT1
FAM156B
FAM156A
TRIM4
MAGEA3
PELATON
CTNNB1
SLC30A6
GALK2
COPS2
AQP5
ING5
TFB2M
CNST
NSA2
GFM2
INTS12
GSTCD
RGS3
ADCK1
CUL2
CSF2
RNF224
NUP62
IL4I1
ATF5
CLSTN1
ORAI3
ZBTB4
POLR2A
TMEM183A
OTUB1
PLPP2
SPEF1
TM9SF4
RPL27