ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX104410 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◢ Cdk9: Average

◢ SRX9144814: 3T3-L1

◢ SRX9144815: 3T3-L1

◢ SRX9144816: 3T3-L1

◢ SRX9144817: 3T3-L1

◣ SRX104410: ES cells

◢ SRX11717263: ES cells

◢ SRX11717264: ES cells

◢ SRX11717265: ES cells

◢ SRX11717266: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◢ SRX735292: Unclassified

◢ Cdk9: STRING

Tcstv3
Greb1
Cldn34d
Hexb
Kpna1
Zfpm1
Comp
Slc44a2
Ap1m2
Map2k4
Brox
Aida
Tsga10
Lipt1
Klhl36
Mfge8
Olfr806
Abhd6
Wwox
Zdhhc20
Dok4
Tbc1d16
Ccdc40
Lrrc74a
Angel1
Sp8
Tnfaip8
Mfap3l
Il31ra
Txndc11
Nkd1
Psen2
Fam214b
E030030I06Rik
Pcgf5
Nrbp2
Spata2l
Olfr1274
Lrrfip1
Kazn
Aadacl2fm1
Plxnd1
2310022B05Rik
Abtb1
Dennd4c
Gm2a
Acsl1
Trrap
Tmem130
Znrf3
Xylt2
Txndc5
Pdp1
Pknox1
Nkx2-6
Ccsap
Cpm
Eif2ak4
Usp12
B4galt5
Degs1
Nde1
Marf1
Cers5
Garem1
Cmtm4
Rassf4
Acer3
Tpmt
Kdm1b
Dlc1
Slc8a2
Kptn
Timm22
Nxn
Arfgap3
G3bp1
Atox1
Mcrs1
Phf23
Gabarap
Dvl2
Pole4
Orai1
Smurf1
Sesn1
Cep57l1
Vil1
Rad51ap2
Prpf40b
Fam186b
Adpgk
G3bp2
Uso1
Plag1
Ccdc112
Tspan17
Eif4e1b
Cadm4
Sema3f
Tmem123
Tpst2
Iffo2
Asap3
Fzr1
Dohh
Fbxw4
5031439G07Rik
Slc19a2
Glrx3
Sspn
Slc8b1
Plbd2
Zc3h12a
Sp1
Asmt
Slc14a2
Gdpgp1
Cib1
Aldh9a1
Gatad2a
Trappc2l
Galns
Tmbim4
Llph
Anapc4
Usp3
Foxc2
Vps26a
Foxl1
Acacb
Acads
Rpl37rt
Snx8
Napepld
Ppp2r5c
Polr2k
Fbxo43
Itga2b
Usp44
Homer3
Pip4k2b
Prodh
Esr1
Pak1
Vgll4
Raly
Ldlrap1
Dusp11
Hpcal1
Slc12a4
Larp1b
Saraf
Leprotl1
Tbc1d14
Chaf1b
Gm10710
Dchs2
Cdc42se2
Pdk1
Micall2
Slc29a4
Twsg1
Setd4
Cbr1
Add3
Dnmbp
Ctdsp2
Unc13a
Ogfod3
Hexdc
Tmtc2
Csgalnact2
Zbtb2
Bcam
Xpr1
Rab22a
Zfp28
Csf2ra
Spsb1
Tspan14
Hebp1
Slc25a15
Oasl1
Ccdc9
Apc2
Litaf
Ripk2
Arhgef3
Socs3
Esd
Ing5
Dtymk
Acadm
Pofut2
Traf5
Mapk8
Anxa11
Gpr155
Nmt2
Aacs
Xpc
Lsm3
Snx22
Ppib
Ankrd50
Qsox1
Ell
Garnl3
Vkorc1l1
Pim1
Pitx3
Gbf1
Dynlt1b
Tnip2
Tlnrd1
Mesd
Tmem169
Pecr
Eef2kmt
Pex10
Sympk
Dars
Sh2b3
Rell1
Bicdl1
Kctd6
Tmem64
St6galnac6
Gpr157
Ak1
Atl2
Trim21
Zfp143
Gxylt1
Prdx3
Sertad2
Hs6st1
Frat2
Jund
Iqcn
Ifna13
Klf16
Vav2
Cerk
Cmip
Tmub2
Afg3l2
Rab43
Yars
S100pbp
Nepro
4921524J17Rik
Sebox
Vtn
Sarm1
Pwwp3a
Tnnc2
Snx21
Ctnnbip1
Id3
Lss
Tmem158
Matr3
Lnpep
Scarb1
Copg2
Glt28d2
Cd209a
Brpf1
Prx
Slc2a13
Dynlt1a
Fnbp1
Fgfr3
Fam210b
Arrdc1
Gins2
Nup107
Tecpr1
Tmem87b
Spryd7
Sgtb
Nln
Pkd1
Pias1
Prex1
Nfe2l2
Zbtb37
Cmtm6
Crocc
Bcap31
Abcd1
Mios
Papolg
Dnm3
Gk5
Slc4a11
Rhpn2
Prpsap2
Inpp5a
Clybl
Paqr3
Lonp1
Catsperd
Wipi1
Dnpep
Dop1b
Rbm38
Dera
Chrnb3
1700001O22Rik
Ntmt1
Rab39
Mnd1
Helb
Zhx1
Tcf3
Urb1
Gja3
Glis2
Tsks
Pou3f1
Baiap2l1
Osbp2
Mtrf1l
Nphs1
Kirrel2
Ola1
Aplp1
Tmem125
Lamc1
Kat6b
Jrkl
Ccdc82
Rbis
Sytl3
Rmdn1
Cpne3
Dynlt1f
Dynlt1c
Plcd1
Sp4
Gcnt1
Fah
Gng12
Fez2
Nemf
Shcbp1l
Tom1
Setmar
Notch1
Plcd3
Acbd4
Llgl2
Tsen54
Ldlrad3
Mindy2
Pde8b
Ascc2
Cyld
Mast3
Ctnnal1
Crmp1
Spata13
Bhlha15
Erc1
Clic4
Cpt2
Usp28
Tctn1
Abcb9
Gpc5
Lmbrd1
Rbbp6
Med26
Ppp2r3a
Slc38a10
Chmp5
Bag1
Slc37a4
Trappc4
Rps25
Mapk9
Pgbd5
Avpi1
Tmem220
Cep55
Ern1
Ppfia3
Lin7b
Sdhc
Mpz
Gpbp1
Rab11fip1
Mfsd14a
Wdr64
Opn3
Chml
Fam227b
Dtwd1
Lcn2
1110008P14Rik
Zfp746
Tbc1d2
Zfp791
Tent5c
Atp1b3
Nrtn
Dus3l
Tppp
Fbxl21
Syn2
Agpat2
Tram2
Sntg2
Brd3os
Mef2b
Copz1
Bri3
Mpc2
Dcaf6
Pif1
Plekho2
Grsf1
Slco4a1
Faiml
Cep70
Vgf
Cyp2w1
Cox19
Impa2
Stx1a
Mex3d
Rxylt1
Hddc2
Dipk2a
Tmem221
Slc27a1
Nxnl1
Tbxa2r
Cactin
Sptbn4
Ing2
Blvrb
Tprgl
Megf6
Tec
Trp53bp2
Tmem41a
Atp7b
Alg11
Frmd6
Rrbp1
Tppp2
Rnase13
Ndrg2
Myo6
Ssh3
Spire2
Slc22a21
Iqce
Brat1
Smg1
Slc22a5
Kif27
Dnajc16
Casp9
Hk1
Fbxo31
Rpl29
Acy1
Abhd14a
Tia1
Pcyox1
Tmem205
Ccdc159
Rab3d
Sowahc
Septin10
Pnpla3
Celf6
Adap2
Sec23a
Gemin2
Mboat2
Acer2
Tctex1d4
Btbd19
Sugct
Mplkip
Plk3
Rnaset2b
Rnaset2a
Fam76a
Csnk1g2
Lims1
Zfp78
Plrg1
Fgb
Fancc
Nt5dc3
Ppargc1b
Kremen1
Wdr20
Otud1
Avl9
Dlg4
Acadvl
Lsm5
Ptdss2
Adh5
Ano9
Inpp4a
Ywhab
Sh3bp4
Slc29a3
Nadk
Ppfibp1
Eepd1
Mphosph10
Mcee
Adss
Ak7
Clcn3
Nek1
Zfp367
Habp4
Btbd2
Sergef
Optn
Fbxo5
Mgst3
Polr1d
Rnf2
Lnx2
Ltc4s
Rsph3b
Olfr855
Olfr854
Ube2g1
Golga5
Plekhg5
Tmem132c
Gpc3
H6pd
Nt5c3
Pqlc3
Capzb
Limk1
Nip7
Cog8
Tmed6
Lonrf1
Fam219a
Dnaic1
Atp5g1
Cyb5r1
Adipor1
Ahsa2
Itprid2
Zbtb5
Polr1e
Akap7
Spa17
Siae
Znfx1
Txnrd3
Syt14
Prkar1b
Dnaaf5
Inpp5f
Anxa5
1810062G17Rik
Osbpl9
Foxn2
Rc3h1
Fhod3
Wdr76
Mfap1a
Prrc1
Vcl
Ubr3
Heatr1
Tbc1d23
9430038I01Rik
Cdc34
Gzmm
Phf19
Tmem50b
Camsap1
Setx
Sh2b1
Tufm
Rassf3
Actr5
Ebag9
Arhgap29
Rabep2
Manea
Pter
Lrrc4b
Pus1
Ep400
Mospd3
Slc2a10
Hspg2
Slc35b2
Nfkbie
Agps
Nbeal1
Tmem151b
Ap3d1
Zfp983
Shank1
Clec11a
Dhdds
Ogfrl1
Rpl31
Mbd2
Zfp664
Ccdc92
Ppfia4
Lag3
Ptms
Pura
Rrm2b
Phf10
Ankrd10
Arrb2
Wrn
Purg
Tmem240
Abhd18
1700034I23Rik
Slc19a1
Col6a6
Brf1
Xpnpep1
Uqcrq
Leap2
Gdf9
Sdc1
Defb36
C1ql1
Gm525
Eea1
Mertk
Xkr8
Klc3
Ckm
Tmem192
Micu1
Atg14
Ctbs
Tarsl2
Gdpd5
Hps6
Armh3
Arhgef17
Senp8
Myo9a
Man1c1
Pop7
Phc2
Setd1a
Orai3
Strada
Skap2
Ap3m1
Adk
Ccdc85c
Hic2
Acot7
Saysd1
Sox12
Dnah7b
Zfp945
Amz2
Epb41l2
Shank3
Trip10
Gpr108
Smco2
Fzd9
A930018P22Rik
Grin2c
Nod2
Kcnq3
Tfip11
Tm2d2
Adam9
Trappc9
Lsm11
Pbx2
Gpsm3
Nmral1
Hmox2
Cdt1
Aprt
Mcm9
Hspa2
Txn1
Fbrsl1
Smox
Pgpep1
Mybl2
Ipo5
Slc25a40
Dbf4
Zdhhc2
Pxn
Stk32c
Usp33
Ralgapa2
Miga1
Serinc5
Scyl2
Ptprcap
Coro1b
Gpr152
Cabp4
Edem1
Zfand1
Castor1
Usp20
BC005624
Drap1
AI837181
Dhx35
Tmem59l
Klhl26
Rasip1
Izumo1
Fut1
Fgf21
R3hdm4
Kiss1r
Atp23
Med16
Gigyf2
Prrg2
Nosip
Prr12
Emilin1
Ost4
Dusp3
Cfap97d1
Ginm1
Tgif2
Scaf1
Rras
Wwtr1
Stim2
Rac3
Tfam
Dcxr
Foxi3
Pard6g
Jph1
Cbr2
Rnft1
Eloa
Zfp865
Zfp524
Fiz1
Cers4
Mapk13
Gamt
Dazap1
Trnau1ap
Tmem69
Gpbp1l1
Rhbdf2
Isyna1
Eml4
Idua
Dgkq
Col5a1
Pias3
Gba
Tspan15
Sppl2b
Lsm7
Lingo3
Zfp868
Caprin2
Dnaja2
Snap29
Pi4ka
Atp8b3
Elavl3
Lgi4
Fxyd7
Fxyd1
Mxi1
Gng7
Diras1
Mrpl2
Klc4
Cul7
Mlf2
Myo10
Unc93b1
Dsel
Wdr17
Myl12a
Rock1
Rap1gap
Efna3
Sox8
Myom1
Arhgef19
Ulk1
Klf11
Bckdk
Vkorc1
Prss53
Wnk2
Shmt1
Wwc2
Ankrd24
Sirt6
Prss57
Kifc2
Cyhr1
Foxh1
Sipa1
Fstl3
Myh9
Sart3
Iscu
Bcl3
Ninj1
Snx25
Aunip
Shc1
Mtch2
Pygo2
Pbxip1
Ralgds
Pdcl
Adipor2
Prxl2c
Tspan31
Marchf9
Cdk4
Mknk1
Dio3
Brwd1
Ilrun
St3gal1
Axin1
Trpv4
Aip
Thbs3
Mtx1
Tmem134
Sumo3
Abcc4
Fosl2
Pcid2
Cul4a
Lrig1
Zfp318
Yif1b
Kcnk6
Myadm
Cdh12
Rcan1
Mzt1
Bora
Tmcc1
Tmem126b
Zfr2
Ptprn2
Epb41l5
Cgn
Atcay
Rsph3a
Pcgf3
Prkra
Pjvk
Tmem59
Tceanc2
Kri1
Cdkn2d
Ackr3
Rassf8
Cpne7
Tent4b
Polr2h
Clcn2
Usp45
Tstd3
Trim3
Timm10b
Arfip2
Ttc38
Slain2
Ptpn4
Gng8
Slc41a3
Nphp3
Il12rb1
Bach1
Dcaf5
Snx1
Ciao2a
Inafm1
Zfp53
Ncapg
Acvr2b
Arhgap45
Il17d
Tpi1
Spsb2
H2bc6
H1f4
Fbxo11
Tle6
Pa2g4
Iqgap1
Kcnh2
Gdf6
Bag3
Slc23a3
Lrrc27
Usp7
Pgm2
E2f1
Abhd17a
Srebf2
Chid1
B4galnt3
Dgkd
Smim20
Tmem177
Hnrnph3
Pbld2
Ahcyl1
Birc6
Ppp1cb
Por
Pdhb
Sqle
Dennd4a
Nova2
Malt1
Prxl2b
Stom
Anxa7
Uba52
Rex1bd
Cbfa2t2
Snx6
Lck
Kank3
Stard5
Ppie
Nkx6-1
Aco1
Myo1c
Sh3bp2
Nectin2
Tmem86a
Pawr
Prr5
Vmn2r102
Ppp1ccb
Ppp1cc
Gtdc1
Prkdc
Mcm4
Gzmk
Gcc1
Fscn3
Arf5
Crim1
Nup93
Zfp516
Etnk2
Pacs1
Pcnx4
Raver2
Lrrc3
Hcn2
Fsip1
Sipa1l2
Mxra7
Magi3
Fam177a2
Fam177a
Trim62
Map2k2
Creb3l3
Armc5
9130023H24Rik
Tgfb1i1
Psmc6