ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX735292 | Unclassified
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◢ Cdk9: Average

◢ SRX9144814: 3T3-L1

◢ SRX9144815: 3T3-L1

◢ SRX9144816: 3T3-L1

◢ SRX9144817: 3T3-L1

◢ SRX104410: ES cells

◢ SRX11717263: ES cells

◢ SRX11717264: ES cells

◢ SRX11717265: ES cells

◢ SRX11717266: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◣ SRX735292: Unclassified

◢ Cdk9: STRING

Tcstv3
Greb1
Txndc11
Cldn34d
Il31ra
Calcoco1
Fyco1
Xcr1
Nkx2-6
Chac1
Nudt13
Hexb
Phf12
Kpna1
Scrib
Prcc
Ccl4
Ccl3
Car5a
Banp
Ddx23
Phb
Usp48
Slc39a1
Aldh9a1
Lsmem2
Naa80
Ifrd2
Hyal3
Tmem125
Sspn
9430015G10Rik
Ifng
Pex14
Dffa
Abhd6
Mrpl19
Rptor
Brox
Aida
Dync1i2
Dusp2
Astl
Usp5
Cdca3
Ppig
Fastkd1
Nop14
Grk4
S1pr4
Ncln
Pprc1
Ap2m1
Olfr806
Ccl1
Slc39a4
Cpsf1
Zfp513
Snx17
Eif2b4
Sec61a1
Kif2c
Btrc
Cotl1
Olfr1274
Tinf2
Nedd8
Gmpr2
Tmem88
Naa38
Cyb5d1
Wdr70
Nup155
Unk
H3f3b
Mtg1
Sharpin
Maf1
Cyc1
Gm35339
Pknox1
Sympk
Foxa3
Cd209a
Xcl1
Dhx33
Opa1
Hmx2
Bub3
Phlda1
Psat1
Proser1
Nhlrc3
Lrrc59
Dnttip2
Fbxl18
Rpp30
Rpia
Zfyve19
Dnajc17
Cwc22
Zfp637
Atp5o
Mapkapk5
Cox8c
Chchd6
Dcps
Sphk2
Spaca4
Rpl18
Fam83e
Hspa5
Zfp189
Mrpl50
Odc1
Chmp4b
Clpb
Usp31
Pomp
Mmachc
Ccdc163
Gm10710
Dchs2
E030030I06Rik
Osbpl1a
Med6
Scaf1
Rras
Capn15
Hsph1
Ap1g1
Mrpl44
Ormdl3
Dffb
Cep104
Nr4a1
Tmed2
Rilpl1
Fam193a
Prr5l
Commd9
Gatb
Pigu
Kbtbd7
Chmp6
Vcpip1
Pafah2
Mff
Med27
Asmt
Rps19bp1
Atf4
Arl14ep
Timm13
Lmnb2
Gde1
Ccp110
Rps20
Pcbp1
Setd4
Cbr1
Trp53rkb
Csf2ra
Timm22
Nxn
Aaas
Wnk1
Alg10b
Nfkbia
Col6a6
Tctex1d4
Btbd19
Krr1
Ube3c
Thap3
Phf13
Kat7
Tmem11
Slc35b4
Zfp207
5730455P16Rik
Pds5b
N4bp2l2
Gsk3a
Ncbp2
0610012G03Rik
Cnot1
Lrif1
Htra2
Dqx1
Snw1
Il2
Herpud1
Ints9
Hmbox1
Gtf3c6
Cep128
Naa60
Dnah7b
Zc3h12c
Fbxw4
Crebl2
Rbl2
Tbc1d31
Ipo13
Pemt
Slc33a1
Lars
Tmem43
Chchd4
Oasl1
Hspa8
Tmem115
Tsnaxip1
Ranbp10
Nprl2
Cyb561d2
Rassf1
Zmynd10
Kdm5a
Ccdc77
Ltb
Tnf
Lta
Tmed9
B4galt7
Syngr1
Rpl3
Nabp1
Tmem101
Gm525
Uqcc3
Ubxn1
Mettl25
Ccdc59
M6pr
Lemd2
Dexi
Clec16a
Nmt1
Tex14
Clptm1l
Calm1
Wrap53
Trp53
Psmd7
Atg101
Smim41
Rcc1
Gtf2ird2
Rcc1l
Sepsecs
Srek1ip1
Cwc27
Ifna13
Ggps1
Arid4b
Invs
Erp44
Bicd2
Sass6
Max
Aadacl2fm1
Rel
Stk25
Psmg3
Ythdf2
R3hcc1l
Prmt6
Tmem214
Mapre3
Ap2s1
Eef1a1
Rnf44
Cdhr2
Nr1h3
Acp2
Trap1
Pabpc1
Rab5c
Rsph3b
Dnajc16
Casp9
Rabac1
Cmas
Palb2
Dctn5
Dph2
B4galt2
Atp6v0b
Tbcd
Shmt2
Ndufa4l2
Cdk9
Snrnp27
Znfx1
Ctu1
Kat2a
Hspb9
Dhx58
Crtam
Yars
S100pbp
Slc27a4
C87436
Wfs1
Spty2d1
Nudt15
Retsat
Elmod3
Snrpd1
Esco1
Tmem245
Stc2
Csf2
Edem2
Prim1
Hsd17b6
Srp68
Galr2
Sectm1b
Chordc1
Tnfsf8
Ap5s1
Slc7a11
Cltc
Tab1
Ndufa9
Akap3
Rdh14
Cipc
Trmt44
Acox3
Nvl
Cnih4
Prkcsh
Ccdc151
Eef1akmt4-ece2
Eef1akmt4
Alg3
Cenps
Trip4
Pclaf
Eapp
Ndufs4
Slc7a1
Cox7c
Enc1
Rangap1
Ube2j2
Pfdn5
Myg1
Phf23
Gabarap
Dvl2
Tbck
Aimp1
Nup54
Vps50
Hepacam2
Snrpc
Rnf123
Mst1
Ncbp3
Fam227b
Dtwd1
Tm7sf2
Zfpl1
Vps51
Tmem262
Cdca5
Zfp945
Btg1
Zcwpw2
Azi2
Nfkb1
Eif2b5
Drg2
Wdr36
Coro2a
Wwox
Gm550
Ndc1
Pcbp2
Rps21
Togaram1
Klhl28
Ubqln4
Rab25
Lamtor2
Pigq
Nhlrc4
Celf2
Slc39a13
Cluh
Sgms1
Sec24a
Sar1b
Mfn2
Gpr84
Smg8
Mrpl21
Ighmbp2
Mrpl35
Immt
Ccdc126
Nup153
Vrk1
Ero1a
Zpr1
Bud13
Psmc6
Mocs1
Tmem94
Thg1l
Zc3h11a
Zbed6
Thap11
Nutf2
Cenpt
Klhl20
Nme1
Cdk7
Ptcd3
Polr1a
Nelfa
Zfp369
Gorasp2
Wdr74
Stx5a
1700092M07Rik
Ptcd2
Mrps27
Iqch
Aagab
Mphosph10
Mcee
Mrps25
Ufl1
Lrrc8a
Rad18
Atp5g2
Blmh
Psmd3
Ppp1r11
Rpl27
Ifi35
Znrd1as
Znrd1
Cstf1
Aurka
Psmb5
Psmb11
Zbtb4
Slc35g3
Polr2a
Ttc4
Tarbp2
Npff
Map3k12
Ddx47
Fitm2
Ippk
Commd1
Cct4
Rab33b
Mrps33
Cnot2
Ppp2r5b
Atg2a
Gpha2
Dgat1
Pole3
Alad
4933430I17Rik
Dmap1
Zfyve1
Rhebl1
Kmt2d
Fam53c
Cdc25c
2610001J05Rik
Slx4ip
Mkks
Snx18
Get4
Pex3
Adat2
Dhrs9
9130401M01Rik
Zfp949
Faf1
Cdkn2c
Fam149b
Ecd
Cog7
Zfp870
Map1lc3b
Sebox
Tsfm
Tmem199
Poldip2
Cops8
Tkfc
Ddb1
Dcaf10
Dnajc11
Sec13
Ndufs7
Trmt10c
Pcnp
Klhdc4
Mib2
Rps3a1
Dcp1a
Dus1l
Nup35
Gm3448
Gm3417
Tcte3
Ermard
Lrrc51
Taf12
Gmeb1
Rhot1
Il2ra
Slc3a2
Stau1
Rad54l2
Hinfp
Arl10
4833439L19Rik
Gspt1
Gtse1
Rexo2
Usp30
Svop
Zfp738
Cerk
Mrpl39
Cox7a2
Atf6
Bod1
Ndufs3
Kbtbd4
Rps23
Cops7a
Tfap4
Rplp0
Gcn1
Vmn2r4
Rpl9
Lias
Ppp6c
Cct8
Lpcat2b
Btbd8
Fra10ac1
Ube2g2
Tysnd1
Ccpg1os
Ccpg1
Ifrd1
Tspoap1
Kifc5b
Tmem107
Dpagt1
Hmbs
H2ax
Gapdh
Mettl9
Sars
1110004F10Rik
Slc4a2
Cdk5
Cdk5rap2
Wbp2
Unc13d
Syt3
1700008O03Rik
Psmb2
Jak2
Gm40193
Psmb6
Gltpd2
Mtres1
Cnot10
Mbd6
Ddit3
Nol10
Arfgef1
Trub1
Pdcd7
Mrpl58
Sdad1
Rpl22
Rnf207
Tcof1
Mterf1a
Frg2f1
Foxj3
Rpl30
Erich5
Tpr
Odr4
Zfp296
Gemin7
Ndufs2
Adamts4
Rab42
Aars2
Ttc13
Arv1
Slmap
G3bp1
Atox1
Mrps15
Slc24a1
Ints14
Pycrl
Gfus
Eif5
Hexim2
Spns1
Lat
Man1b1
E130309D02Rik
Prpf4
Cdc26
Nsfl1c
Tut7
Rpl8
Commd5
Thoc1
Nek4
Itih1
Rbm39
Eefsec
Tmem147
Gapdhs
Rfc4
Srp19
Cdkn2aipnl
Cox6c
Gtf2h3
Eif2b1
Sox5
Tmed10
Kdm3b
Gid4
Cacybp
Rtn2
Dimt1
Actb
Vps72
Pip5k1a
Dhx30
Arid1a
Actr10
Plaa
Gm12657
Sdf2l1
2610318N02Rik
Stx18
Mrpl30
Mitd1
Rbsn
Rgs14
Lman2
Ubxn11
Slc38a1
Cd52
Kmt2a
Eif2b3
Rab1a
Gmfb
Cgrrf1
Zfp113
Cops6
Phospho1
Eif4e2
Chrng
Ptrhd1
Cenpo
Psca
Jrk
Rpl5
Rpl36
Micos13
Secisbp2
Cks2
Eps15
Tmem167b
Rbm34
Ppip5k2
Gin1
Tpgs1
Madcam1
Heatr5a
Mlec
Kctd5
Rabl6
Ccdc183
Tcea1
Zar1l
Brca2
2210016L21Rik
Alkbh8
Fam187a
Eftud2
Ccdc103
Nemf
Lrwd1
Alkbh4
Sdhaf3
Mcl1
Zfp791
Nudcd1
Eny2
Mief1
Espl1
Diaph1
Atg16l1
Taco1
Ece1
Mpzl3
Fbxo48
Ptma
Ubr4
Cxcr6
Polg2
Ddx5
Cep95
Actg1
Zc3h10
Rpl41
Zfat
Ctdp1
Slc25a10
Mrpl12
Pcbd2
Rpl13a
Flt3l
Rps11
Cd69
Tspan4
Polr2l
Cd151
Rnf39
Sf3b2
Gal3st3
Ate1
Slc39a9
Erh
Tapbp
Rgl2
Mxra8
Sfxn5
Tatdn3
Nsl1
Aurkaip1
Mtrex
Dhx29
Thap4
Atg4b
Cant1
C1qtnf1
Snx19
Ric8b
Med17
Ddx1
Brf1
Them4
Ube2v1
Eif3g
Ptprcap
Ciao3
Ahcy
Lsm12
G6pc3
Tsg101
Zbtb7b
Trak2
Gpr15
Gpaa1
Exosc4
Larp4
Arf3
Hjurp
A730008H23Rik
Hacd2
Rpl27a
Napg
Pa2g4
Dntt
Ubb
Pus1
Ep400
Ints5
Ganab
1810009A15Rik
Lbhd1
Cdk5rap1
Cep135
Nrde2
Tra2b
Knl1
Ints12
Gstcd
Zdhhc21
Zranb3
R3hdm1
Alkbh3
Fam83g
Rbm17
Rplp2
Tefm
Mars1
Slc25a22
Pidd1
Smim13
Zbtb37
Nars
Trp53rka
Epn1
Ndufc2
Tmem127
Ciao1
Pigg
Olfr1416
Ndufa10
Sema6a
Leng8
Ccdc174
Tchp
Iars
Zfp566
Zfp260
Pten
Fem1b
Nuf2
Rbm22
Lcorl
Pde6d
Cops7b
Rasa1
Pgs1
Adrm1
Tmem248
Aasdh
Gtdc1
Psd
Fbxl15
Smim8
Brwd1
Poglut3
Ppil4
Wfdc21
Heatr6
Rad1
Brix1
Cnot8
Psmf1
Ddx46
Gm29733
Marchf5
Cpeb3
Xpc
Lsm3
Wdr5
Wdr25
Wars
Pan2
Il23a
Taf9
Rad17
Ak6
Ptpn6
Grcc10
Gars
Rps13
Rnf220
Guf1
Ctbp1
Vars2
Gtf2h4
Ybey
Mcm3ap
Ankrd46
Fam168a
Cyp11a1
Tti2
Snrpd3
Gucd1
Tfeb
Rhbdd3
Ewsr1
Asb8
Txnl4b
Dhx38
Mre11a
Ankrd49
Cd3g
Cd3d
Ccdc184
Tmem129
Tacc3
Slbp
Tyw3
Cryz
Zfp672
Sh3bp5l
Ndfip1
Zfp729a
Zfp148
Kcne2
Smim11
Gimap1
Gimap5
Adora2a
Uspl1
Epc1
Gtf2b
Egr2
Rabggtb
Msh4
Myc
Lancl2
Stx8
Cfap52
Zfp606
Txlnb
Dis3l2
Lyrm2
Mad2l1bp
Gtpbp2
Man2c1
Ndufb5
Mrpl47
Gas2
Unc45b
Nle1
Mpdu1
Eif4a1
Dda1
Ap4e1
Rnf166
Ctu2
Mrpl34
Abhd8
Tgm1
Rabggta
Appl2
Adck1
Pus3
Ddx25
Rdm1
Fam166a
Stpg3
Secisbp2l
Twf1
Zfp706
Ube2z
Psmd12
Pitpnc1
Plk3
Siah2
Nelfb
Pdia6
Gtf2h2
Fam118a
Mrps16
Dnajc9
Polk
Cert1
Zfp661
Mrps5
Calm3
Cdkl4
Arl8b
Ssbp1
Prrg2
Nosip
Cul2
Prr12
Cpped1
Wasf1
Cdc40
Sectm1a
Plekhn1
Noc2l
Klhl17
Csde1
Golga4
Kif13b
Nup188
Dolk
Srsf2
Mfsd11
Mettl23