ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX735308 | Th1 Cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◢ Cdk9: Average

◢ SRX9144814: 3T3-L1

◢ SRX9144815: 3T3-L1

◢ SRX9144816: 3T3-L1

◢ SRX9144817: 3T3-L1

◢ SRX104410: ES cells

◢ SRX11717263: ES cells

◢ SRX11717264: ES cells

◢ SRX11717265: ES cells

◢ SRX11717266: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◣ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◢ SRX735292: Unclassified

◢ Cdk9: STRING

Tcstv3
Greb1
Cldn34d
Brox
Aida
Kpna1
Txndc11
E030030I06Rik
Il31ra
Nkx2-6
Olfr855
Olfr854
Hexb
Ifng
Zfp949
Asmt
Rgs1
Pknox1
Acacb
Fbxw4
Rps29
Lrr1
Aldh9a1
Fkbp1a
Fyco1
Xcr1
Abhd6
Nemf
Olfr1274
Cd209a
Ifna13
Sfi1
Eif4enif1
Csf2ra
Tmem125
Npffr2
Olfr806
Abca3
Abca17
Col6a6
Nudt13
Wasf3
Ccdc9
Wwox
Tmsb4x
Vps18
Cdh12
Cerk
9430015G10Rik
Cox8c
Furin
Fam227b
Dtwd1
Lrrc32
Nfkbia
Dhx40
Acod1
Il7r
Nabp1
Dnah7b
Aadacl2fm1
Il2ra
Sytl3
Nes
Spata20
Tex14
Ahdc1
Id2
Ankdd1a
Psmd3
Tgfb3
Ift43
R3hdm4
Kiss1r
Arid3a
Setd4
Cbr1
Fmnl3
Sspn
Snx18
Stat1
Med4
Ms4a6d
Mrpl39
Dusp5
Tspoap1
Irf4
Osbpl5
Rasgef1b
Rfng
Gps1
Lmbrd1
Niban1
Slc34a1
Pfn3
Tatdn3
Nsl1
Dpep2
Oasl1
Irak2
Chd9
Nsg2
Tmem18
Anxa6
Cebpb
Piezo1
Ralgds
Cblc
Prdx2
Junb
Btrc
Stx16
Il16
H2-L
H2-D1
Ccin
Fam166b
Cdc42bpg
Ptpru
Mecr
Nfam1
Camk2g
Spata5l1
AA467197
Selenon
Mtfr1l
Ifnab
Gm3448
Gm3417
Tcte3
Ermard
Dusp2
Astl
Nob1
Adnp
Prkce
Katnbl1
Taf12
Gmeb1
Lyl1
Lman1l
H3c3
H2bc3
H1f2
Zswim7
Ttc19
Zcwpw2
Azi2
Ahcyl1
Gtf3c6
Pds5b
N4bp2l2
Man2b2
Eapp
Sema4a
Rangrf
Mrps11
Mrpl46
Lst1
Aif1
Shc1
Flad1
Cks1b
Lenep
0610009B22Rik
Lilrb4a
Rrp15
Gipr
Snrpd2
Qpctl
Lilr4b
Lsmem2
Naa80
Ifrd2
Hyal3
Gpr83
Tinf2
Nedd8
Gmpr2
Nsmce4a
4932438H23Rik
Actb
Gzmb
Clcnka
Gm3435
Agk
Map4k5
Atl1
Scnn1g
Slc26a8
Mapk14
Olfr266
Ptpre
Clrn3
Alpk2
Scrib
Stat5b
Stat5a
Med7
Pim1
Slc44a2
Ap1m2
Mterf1a
Bcl6
Ier5
Flywch1
Zfp3
Nudcd1
Eny2
Gimap1
Gimap5
Car5a
Banp
Zfyve1
Spns1
Lat
H4f16
H2aj
Pif1
Plekho2
Btg1
Stag1
Tesmin
Gadd45g
Pafah2
Zscan22
Trp53rkb
Zbtb45
Llgl2
Tsen54
Caskin2
Kbtbd7
Rasip1
Izumo1
Eif4b
Ankrd6
Gna15
Rsph3a
Pten
Yars
S100pbp
Palb2
Dctn5
Runx3
Cetn4
Bbs12
Ppard
Get1
Gtdc1
Prkcq
1700001O22Rik
Myc
Cfap45
Cox8b
Ptp4a2
Hemk1
6430571L13Rik
Ints9
Hmbox1
Calm3
Zbtb4
Slc35g3
Polr2a
Gm10710
Dchs2
Unk
H3f3b
H3c15
H3c14
H2ac19
H2ac18
H4c14
H3c13
H2bc18
H4bc24
H2bc23
H2ac24
H2ac23
H4c3
H1f6
Srsy
Gm21828
H2bc6
H4c18
Cxcl1
Rsph3b
Osbpl1a
Rps19bp1
Atf4
Eif1
Cwc22
Errfi1
H4c4
H3c4
Mt1
Mt2
Polg2
Ddx5
Cep95
H2bc7
H2ac7
Ubc
H1f3
H3c6
H2bc8
H2ac8
Mat2a
Jund
Iqcn
Gm525
Actg1
Fth1
Klf7
H3c11
H2bc22
H2ac22
H1f5
H1f4
Eef1a1
Ube2a
Hnrnpa2b1
Cbx3
H3c8
H4c9
H2bc12
H2bc11
H2ac12
H2ac11
Tob1
Ier3
Flot1
Ttc39d
Srsf7
Ppp1r10
Mrps18b
Atat1
Hspa8
Zfand5
Hspa5
Arf6
H4c17
Syngr1
Rpl3
Dusp1
Tsc22d1
Ctnnb1
Pgk1
Kif2c
H2ac10
H4c8
Egr1
H4c6
Mcl1
Poldip3
Ppia
Ubb
Slc35e3
H3c2
H2ac4
Raly
Mdm2
Vim
H2bc21
H2ac21
H2ac20
Id3
Fam53c
Cdc25c
Ier2
Nr4a1
Ftl1
Bax
Zfp143
H4c2
Zfp945
Sp1
H4c1
Ddit4
H3c1
Arl4d
H3c10
H2bc13
H2ac13
Cited2
Calm1
Srsf2
Mfsd11
Ifrd1
Thbs1
Zyx
Adamts1
Fbxl18
H2bc14
Vcl
Chac1
Fus
Zfp36l1
Cirbp
Mettl23
Sirt4
Rplp0
Gcn1
Sdc4
Cebpd
Sqstm1
Slc38a2
Id1
Herpud1
Cdkn1a
Nfkbiz
Fam174c
Btg2
Tpt1
Pnrc1
Cltc
Fos
Ccnl1
Zfp36l2
Prdx1
Lmna
Ulk2
Sympk
Ppp1r12a
Txnip
BC005537
Dnajb4
Ccn1
Znfx1
Lima1
Vmn2r4
H1f1
Pcif1
Calcoco1
Tuba1c
Uspl1
Srsf5
Odc1
Efcab2
Clec2d
Yeats4
Pald1
Tmem167b
Nfat5
H2-DMa
Ptp4a1
Hsp90aa1
Tmem107
Plk2
Slc35b2
Sgk1
Dpagt1
Tuba1a
Sik1
Serpine1
Rbm39
Litaf
Slc14a2
Fubp1
Tpm1
H2bc4
H2ac6
Hmbs
H2ax
Rgs2
Srsf6
Brd2
Dnaja1
Ap1g1
Rps20
Dnajb1
Myl12a
Ddx3x
Pcbp1
Srsf3
Slc25a4
Palld
Hsp90ab1
Zfp36
Esr1
9030025P20Rik
Tuba1b
Slc3a2
Ptgs2
Ywhaz
H3c7
H2bc9
Fn1
Epc1
Tti2
Ddx23
Rhob
Tiparp
H4c11
Tmem123
Nup62
Il4i1b
Atf5
Timp2
Ints6
Vmn2r102
Ccl7
Serinc3
B2m
Hnrnph1
Zfp207
5730455P16Rik
Cdc42
Tecpr1
Rptor
Zfp513
Snx17
Eif2b4
Plekhg2
Pabpc1
Gorasp2
Erdr1
Klf6
Zfp869
Usp4
Gpx1
Eif5
Phlda1
Rcc1
Ccl2
Mrpl44
1810013L24Rik
Taf4
Tra2a
Gtf2b
Setd5
Calm2
Pole4
Dync1i2
Kmt2e
Cnot1
Col1a1
Dstn
Itga5
Mpdu1
Hmox1
Eif4a1
Atp5g1
Larp4
Napepld
Phlda3
Hnrnpab
Tmem50a
Syf2
Rsrp1
Insig1
Myh9
Itgb1
Smim10l1
Med1
Cdk12
H4c12
H2bc15
H2ac15
Phf12
Ncl
Hexim2
Rsrc2
Kntc1
Ppbp
Amn1
Selenop
Rap1b
Stat3
Zfp963
Pdlim5
Flna
Emd
Sde2
Gm13285
Gm13290
Gm13289
Coq10b
Aaas
Ppp1r15a
Plekha4
G3bp1
Atox1
Trib3
Scaf1
Rras
Tmed2
Rilpl1
Csf1
Urgcp
Lag3
Gcat
Zfp791
Pus1
Ep400
Hmgb2
Nfe2l2
Zfp1
Tmem129
Tacc3
Slbp
Chmp4b
Gapdh
Hif1a
Rnf10
Coq5
Esyt2
Zc3h6
Ndufs7
Prcc
Resf1
Zfp868
Mbd6
Ddit3
Pkd1
Jun
Crem
Ptms
Retsat
Elmod3
Mknk2
Rad23a
Hgsnat
Slc25a3
H1f0
Eef2
Dapk3
Slc18b1
Socs3
Zfp655
F3
Wsb1
Rdm1
Pim3
Wdr81
Tob2
Calr
Mrpl20
Ccnl2
Matr3
Atp6v0c
Amdhd2
Cxcl5
Tmsb10
Gem
Senp3
Tctex1d4
Btbd19
Nufip2
Sptan1
Rps12
Pias4
Nfkbil1
Ddx39b
Atp6v1g2
Zbtb37
Ifnz
Rnft1
Uqcc3
Gm13287
Gm13279
Gm13278
Gm13275
Trmt10c
Pcnp
Actr3
Wnk1
Eif3a
Mettl25
Ccdc59
Eif3c
Eif4g2
Cfl1
Crebzf
Ppp1r2
Gls
Nip7
Irf1
Gm13288
Cog8
Opa1
Baiap2
Kmt5b
Fam166a
Ywhag
Fstl1
Teddm1a
Glul
Dgat1
Tra2b
Taf13
Rpl10a
Stpg3
Pprc1
Pdlim7
Zbed5
Phkg1
Chchd2
Csrnp2
Rheb
Gtf2a1
Ppig
Usp48
Son
Gm36712
Gart
Snx5
Mgme1
Egr2
Ugdh
Spen
Map2k2
Creb3l3
Sec61a1
Pdss2
Rabgef1
Gm13272
Bach1
Arrdc2
Ctsl
Rnf19b
Mtf2
Atp2a2
Ldha
Aff4
Slc9a1
Slc39a4
Fosb
Cpsf1
Birc2
Raf1
Ptpn6
Grcc10
Ptpn2
Csnk1a1
Chrac1
Srsf1
Hnrnpa1
Cbx5
Zfp866
Map1lc3b
H2-K1
Ndel1
Hnrnph3
Top1
Morf4l1
Tlcd2
Gadd45a
Ddx59
Cds2
Sp3
Wdr70
Lbh
Klf2
Mthfd2
Mob1a
Ptma
Gm14595
Gm14590
Sfpq
Mterf1b
Slc2a1
Kdm6b
Slc39a10
Phf23
Gabarap
Dvl2
Slc39a1
Ep300
Rock2
Nfyc
Homer1
Kctd5
Ubxn1
Nup155
Arl14ep
Mylip
Idh3b
Tmem230
Pcna
Txnl1
S100a10
Ncor1
Pdf
Sod1
Eif2b5
Gsto1
Mrpl45
Mbnl1
Txn1
Fitm2
Arntl
Nsrp1
Zc3h10
Rpl41
Chmp6
Phb
Nsd3
Letm2
9530077C05Rik
Arih1
Vdr
Sub1
Dynll1
Pigl
Cpeb2
Hmgn2
Cd80
Adprh
Gadd45b
Gpx4
Pbld2
Ahnak
Vegfa
Hipk3
Atp6v1h
Ifi211
Sppl2a
Sf3b1
Ufl1
Selenot
Egr3
Htra2
Dqx1
Ccdc88a
Fgfbp3
Btaf1
Zfp637
Galk2
Cops2
Wbp4
Elf1
Acta2
Ptges2
Gabpb2
Fasn
Gm13277
Sepsecs
Eif4e2
Chrng
Sned1
Rabggtb
Msh4
Frmd6
Hdlbp
Lrrc8a
Polr2m
Col4a2
Col4a1
Slc5a3
Mrps6
Aacs
Rpl9
Lias
Tmem175
Slc25a32
Gak
Dcaf13
Rab5if
Zbtb11
Rpl24
Gstp2
Gstp1
Rps3a1
Ets2
Zfat
Tm7sf2
Gm13276
Mmaa
Nsfl1c
Hexim1
Npm1
Sharpin
Maf1
Hnrnpa3
Cyc1
Prrc2a
Tmem87b
Parva
Map2k4
P4hb
Arhgdia
Ube2j2
Kdm5a
Ccdc77
Tmpo
Rps8
Rab11b
Ppm1a
Mtg1
Stau1
Tut7
Commd1
Cct4
Adpgk
Rpl17
Fosl2
BC031181
Sik2
Ubald1
Ncbp2
Mgrn1
0610012G03Rik
Rmi1
Hnrnpk
Kansl2
Pafah1b1
Tubb4b
Slc34a3
Atf1
1700001P01Rik
Lox
Rfx3
Hspa4
Dusp11
4930415O20Rik
Ppp6c
Ap2m1
Ero1a
Luc7l
Fam234a
Ranbp2
Slc7a5
Cct8
Gpr84
Tbcd
Nol12
Ndfip1
Lgals1
Ccng1
Gm35339
Sec62
Dpy19l4
Mmadhc
Hmgcr
Rabl6
Pkm
Ccdc183
Arl8b
Psmd7
Pnp
Kat7
Eci1
Saraf
Leprotl1
Aldoa
Rab1a
Lrif1
Brwd1
Adnp2
Mrpl35
Immt
Plxdc1
P4ha1
Mrpl19
Dcp1a
Spindoc
Fam43a
Atp5g2
Rps27rt
Rab13
Oat
Cct2
Paxip1
Clk1
Cox20
Tomm34
Stk4
Rbks
Babam2
Tcf25
Fbxl3
Cap1
H2bu2
Hspa9
Rfc4
Jak1
Gars
Calu
St3gal2
Rps6
Ndufb8
Hif1an
Tab1
Tle3
Plec
Ift46
Arcn1
Tmem115
Angptl4
Nop14
Grk4
Rrn3
Rab7
Zglp1
Trmt44
Tkfc
Ddb1
Acox3
S1pr4
Ncln