ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9144814 | 3T3-L1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◢ Cdk9: Average

◣ SRX9144814: 3T3-L1

◢ SRX9144815: 3T3-L1

◢ SRX9144816: 3T3-L1

◢ SRX9144817: 3T3-L1

◢ SRX104410: ES cells

◢ SRX11717263: ES cells

◢ SRX11717264: ES cells

◢ SRX11717265: ES cells

◢ SRX11717266: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◢ SRX735292: Unclassified

◢ Cdk9: STRING

Zbtb4
Slc35g3
Polr2a
H4f16
H2aj
Cxcl1
Unk
H3f3b
Cwc22
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
H3c15
H3c14
H2ac19
H2ac18
H4c3
H1f6
Slc35e3
Yeats4
H3c3
H2bc3
H1f2
H4c14
H3c13
H2bc18
Tob1
Eif1
H4c17
Ftl1
Bax
H2bc6
H4c4
H3c4
H2bc7
H2ac7
Ppbp
Cxcl5
Tuba1a
Mt1
Mt2
Tsc22d1
Arf6
Nfkbia
Sp1
Kmt5b
H3c8
H2ac10
H4c8
Hmgb2
H1f4
H1f3
H3c6
H4c6
Sned1
Pnrc1
Angptl4
Mat2a
Adamts1
Clec2d
Smim10l1
Txnip
Nup62
Il4i1b
Atf5
Col1a1
Rps19bp1
Atf4
Zfp36l1
Zfp36l2
Sqstm1
Mdm2
Fth1
Fam43a
B2m
Slc5a3
Mrps6
Uspl1
Arrdc2
Ttc39d
Srsf7
Ints6
Jund
Iqcn
H3c11
H2bc22
H2ac22
H1f5
Tuba1b
Hmgn2
Cebpd
Ppp1r10
Mrps18b
Atat1
H4c9
H2bc12
H2bc11
H2ac12
H2ac11
Efcab2
Mmp2
Nsd3
Letm2
Pcbp1
Ddit4
Klf7
H2bc21
H2ac21
H2ac20
Eef1a1
Gm3448
Gm3417
Tcte3
Ermard
Poldip3
Ubc
Prdx2
Junb
Slc25a4
Selenop
Resf1
Srsf3
Ulk2
Cited2
Brpf3
Lag3
Ptms
Ppp1r12a
Tex14
Btg1
Vim
Irf1
Son
Gm36712
Gart
Actb
Klhl24
Slc39a10
Pnp
H2bc8
H2ac8
Cebpb
Epc1
Napepld
Polg2
Ddx5
Cep95
Taf4
Gcat
H1f0
Syngr1
Rpl3
Cdkn1a
Ddah2
Clic1
Mpig6b
Ly6g6c
Rrp36
Mea1
Klhdc3
Nip7
Cog8
Pdf
Uhmk1
Tmsb10
Ppia
Med1
Cdk12
Ddx3x
Hexim2
Sec62
Ccng2
H3c2
H2ac4
H4c2
H4c1
H3c1
H1f1
Tcstv3
Slc38a2
Csrnp2
Gm13285
Gm13290
Gm13289
Ifnz
Gm13272
Srsf6
Rap1b
Pcif1
Cox20
Urgcp
Wsb1
Sp3
Dip2b
Zfp1
Fbxl3
Phlda3
Ctnnb1
Nde1
Marf1
Fus
Spen
Sik1
Col1a2
Prdx1
Nrf1
Ubb
Fam53c
Cdc25c
Calm1
Hnrnph1
Zfp866
Rnf103
Zfp655
Zfp963
Dennd6a
Hnrnpa2b1
Cbx3
Tmem223
Tmem179b
Eif4g2
Odc1
Timp2
Serinc3
Gfpt1
Rhou
Cpsf6
Nfat5
9530077C05Rik
Anln
Atp6v0c
Amdhd2
Hmgn1
Recql4
Lrrc14
Lrrc24
C030006K11Rik
Gadd45a
Amacr
Ctdsp1
Rad23a
Sun2
Gadd45gip1
Dand5
Zfp207
5730455P16Rik
Eif3a
Dynll1
Gm13287
Gm13279
Gm13278
Gm13275
Gm13288
Gadd45b
Cplane1
Ccl7
Ankrd37
Zfp771
Dctpp1
Ddx17
Slc5a6
Cad
Atraid
Dpagt1
Hmbs
H2ax
Mylip
Phf2
Slc43a2
Hsp90aa1
Rsrc2
Kntc1
Rfc4
Ssbp4
Lrrc25
Kif2c
Bach1
Sdc4
Hexim1
Gpr19
Ier5l
Mthfd2
Mob1a
Srsf2
Mfsd11
Mettl23
Pdss2
Atp5g3
Frs2
Mmadhc
Atg10
Raly
Calm2
Nfyc
Tapbp
Rgl2
Ep300
Zfp41
Hif1a
Ahnak
Plxdc1
Zfp236
Mgst1
H2-DMa
Brd2
Mrpl45
Gm13277
Gm13276
Crebrf
Tmem65
Ywhae
Glg1
Rbm39
Trp53inp1
Ubn2
Rnpc3
Fam162a
Ccdc58
Rplp0
Gcn1
Ppm1a
Fbl
Dyrk1b
Wbp4
Elf1
Npm1
Rmi1
Hnrnpk
Acyp2
Tmem167b
Mogs
Mrpl53
Ccdc142
Tnks2
Gab1
Zfp143
Usp4
Gpx1
Cltc
Tmem183a
Eapp
Atf1
Zfand5
Cdkn1b
Litaf
Zfp868
Nckap5l
Zer1
Tbc1d13
Rgs2
Plpp3
Cbx7
Eci1
Fnta
Chrac1
Rasl11b
Zfp869
Tmem50a
Syf2
Rsrp1
Nt5c2
Itfg2
Wwp2
Znfx1
Morf4l1
Mllt10
Skida1
Vamp8
Vamp5
Ctsl
Cldn34d
Rfx3
Ccng1
Zfp740
Csad
Camk1
Pkn1
Sik2
Kctd20
Rab5a
Pxt1
Zfp248
Relb
Emilin1
Itm2b
Khk
Slc35b2
Hsp90ab1
Mcur1
Tmem125
Mak16
Tbrg1
Ier3
Flot1
Brwd1
Msantd2
Gpr146
Wdr19
Khsrp
Slc25a41
Pcmtd1
Tia1
Pcyox1
Tasor
Agbl3
Gmeb2
Csnk2a1
Hipk3
Cdkn2aip
Herpud1
Ccl2
Sppl2a
Vamp2
Marchf7
Kansl1
Zfp605
Plcxd1
Gtpbp6
Oga
Nabp1
Arhgap12
Tm9sf3
Lrrc58
Gm36028
Samd9l
Cap1
Acin1
1700123O20Rik
Lyplal1
Plk2
Slc3a2
Aga
Cirbp
Fam174c
Amn1
Retsat
Elmod3
Arl2bp
Ttc7
Lrrc61
Ndufb8
Hif1an
Sec31b
Mtif2
Hmox1
Calr
Farsa
Rock2
Cct2
Clk1
Dusp10
1700056E22Rik
Gpr85
Lbh
Gnas
Sgo1
Pdcd4
Nr3c2
Csf1
Tnp2
Socs1
Prm3
Prm2
Ccdc91
Mknk2
Gstp2
Gstp1
Sugp1
Mau2
Tnrc6c
Arpc1b
Zfp319
Usb1
Psap
Patj
Sspn
Sirt4
Cul5
Fbxo15
Timm21
Ptpn2
Phf10
Wnk1
H2-K1
Adnp2
Tgfbr3l
Map2k7
Klf6
Cpeb2
Sec61a2
Zfp397
Fn1
Tpk1
Vdac3
Nfkbie
Nup107
Zbed3
Nop53
Fscn1
Pop7
Hnrnpdl
Enoph1
Dhrs7
Brd1
Wdr45
Praf2
Inafm1
Klhdc1
Gigyf1
Ptma
Gng12
Btg2
Siah1a
Nop2
Asah2
Dnajb4
Fubp1
Pabpc1
Gas1
Rtn4
Wtap
Timmdc1
Ephb4
Rcn2
Cat
Maf
Raf1
Taok1
Chd4
Ilkap
Spr
BC005537
Teddm1a
Glul
Atp2a2
Rab1a
Ppp1ccb
Ppp1cc
Znrf1
Cutc
Cox15
Sox4
Gna12
Map1lc3b
Tmf1
Fbxo31
Sft2d3
Mphosph9
2810006K23Rik
Wwc2
Tmem87a
Ganc
Pim3
Ncor1
Pigl
Prkag1
Zfp68
A430033K04Rik
Dgcr6
Stat3
Gtf2a1
Dynll2
Trim28
Mrpl2
Klc4
Cul7
Sv2a
Sf3b4
Cul3
Snai1
Chmp2a
Gcc1
Fscn3
Arf5
Kdm3b
Slc18a1
Atp6v1b2
Cpne2
Prrc2a
Tmem39a
Pan3
Gtf2b
Tmpo
Rprd2
Bri3
Rybp
Sptan1
Map2k2
Creb3l3
Ndfip1
Senp5
Ppdpf
Zfyve16
Pck2
Ralbp1
F3
Lrp6
Ube2l3
Rimbp3
Otub1
Epc2
Rdh5
Cd63
Ppp1r3c
Sebox
Tmem199
Poldip2
Tmem209
Ssmem1
Txndc15
Pdcl
Lmna
Rhob
Oxsm
Ngly1
Nuak1
Klhdc2
Fam189b
Scamp3
Ttk
Cd80
Adprh
Nol12
Lgals1
Tcf25
Plec
Gxylt2
Tra2a
Socs3
Ppp2r3a
Cdkn2b
Cyth2
Rnf14
Ube2b
Cdkl3
Zfp991
Zc3h6
Gem
Ilf2
Jpt1
Tomt
Lamtor1
Anapc15
Dazap2
Npr1
C3
Tlk2
Prrc2b
Ppa2
Erdr1
Trmt44
Acox3
Tax1bp1
2700081O15Rik
Pkd1
Errfi1
D5Ertd579e
Nfkbiz
Uqcc3
Kctd5
Ubxn1
Elk4
Micu3
Lhx9
2310009B15Rik
Dnaja1
Ppp1r2
Flcn
Tnfaip2
Zfp617
Rhog
Birc2
Smad1
Cd248
Vasn
Klf11
Lasp1
Zfp69
Mmp11
Gm867
Chchd10
H3c10
H2bc13
H2ac13
H2bc14
Upf3a
Lig3
B3gnt9
Tradd
Fbxl8
Kansl2
Tgfbr3
Hlcs
Dyrk1a
Plin5
Plin4
Yeats2
Med28
Rnf19b
1810058I24Rik
Fbxo6
Fbxo44
Fbxo2
Cblb
Paip2
Itgb1
Sod1
Irs2
Bmt2
H2bc4
H2ac6
Klf2
Pura
Pkd2
Traf4
Pccb
Plcg1
Mcl1
Galk2
Cops2
Zglp1
Rfx1
Dda1
Mos
Tusc3
Ano8
Adamts5
Taf12
Gmeb1
Tmsb4x
Hnrnpm
Usp53
Rpl35a
Lmln
Iqcg
Gbe1
Zfp384
Nr2c2
Uhrf2
Pianp
Ttc17
Polb
Gsto1
Kansl1l
Ypel3
Tbx6
Srsf5
Palld
Ubald1
Mgrn1
Aven
Gtdc1
Cdc42ep3
Gamt
Dazap1
Nsmf
P4hb
Arhgdia
Ppp4r3b
Ndst2
Adck2
Nfatc3
S100a10
Pcmt1
Lats1
Necap1
Slc12a2
Rnf10
Coq5
Dlgap4
Cpt1b
Chkb
Fzd1
Pot1a
Nfkbil1
Ddx39b
Atp6v1g2
Lrif1
Ulk1
Ctsb
Baiap2
Tomm34
Stk4
Nrip1
Cstb
Slc17a7
Pih1d1
Aldh16a1
Adnp
Ddx59
H3f3a
Ssbp1
4833420G17Rik
Strn4
Fkrp
Il10rb
Fstl1
Mmaa
Ube2v2
C330018D20Rik
Akap1
Sike1
Atxn1l
Ksr1
Thap1
Mphosph6
Rtkn
Cdc42
Zbtb37
Atp5g2
Nrbp1
Rufy1
Zbtb44
Vps54
Id1
Arl15
Fmc1
Zfp821
Nipsnap2
Mrps17
Pole4
H4c12
H2bc15
H2ac15
Pcf11
Gpr155
Rbm5
Troap
Tmem237
Zbtb11
Rpl24
Zcwpw1
Ppp1r35
Mepce
Trmt1l
Swt1
Dennd4b
Tef
Patz1
Kmt2e
Trmt10c
Pcnp
Sub1
Arrdc3
Ubr1
Tmem62
Yme1l1
Mastl
Nudt4
Lyz2
Ywhaz
Dusp11
Sdhaf2
Mef2a
Cpsf7
Rpl26
Dync1li2
Thap7
Scand1
Cnbd2
Atp6v1g1
Aff4
Foxj2
Eef2k
Ccni
2010109A12Rik
Dennd6b
Slc23a3
Retreg2
Cnppd1
Crot
Per3
Nfe2l2
Bbs2
Ripor1
Akap8
Rab11b
Lox
St3gal2
Zmat1
Pick1
Sde2
Rplp1
Rbm12
Cpne1
Zfp438
Orc4
Mbd5
Maged1
Pxdn
Tti2
Rbm4b
Zfp672
Sh3bp5l
Kpna2
Tdrd1
Ccdc186
Npm3
Fgf8
Snrpb
Homer3
Rasl11a
Boc
Fam227b
Dtwd1
Zfat
Lemd2
Mtmr2
Mrtfb
Pdpk1
Snn
Zfp423
Selenot
Nsfl1c
Seh1l
E4f1
Cers5
Bdnf
Kbtbd3
Aasdhppt
Srbd1
Lifr
Tmem170
Rnf122
Frmd6
Ppp3cb
Cebpg
Drg1
Asb8
Smarcd1
Asic1
Cdkn2a
Zfp11
Pink1
Kif13a
Ptpn6
Grcc10
Csnk1a1
Phykpl
Haus1
Atp5a1
Tnfsf13
Tnfsfm13
Tnfsf12
Msh5
Usp40
Specc1l
Hoatz
Memo1
Lnpep
Rbm14
Gm21992
Slc29a3
Usp32
Slc25a15
Sp7
Lrrk2
Pafah1b1
Caprin1
Dusp7
Col3a1
Zfp703
Txnl1
Kdm3a
Coq9
Ciapin1
Ggnbp2
Rnf146
Dzip3
Cip2a
Pigw
Myo19
Tmem128
Gnpat
2810004N23Rik
Grsf1
Pcgf3
Mppe1
Dcdc2b
Iqcc
Ccdc28b
Trib3
Slc9a1
Fasn
Trir
Tnpo2
Get3
Ankrd17
Nras
Zbtb6
Rc3h2
Osmr
Dtwd2
Ei24
4930415O20Rik
Ccnt1
Zfp959
Hp1bp3