ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX735282 | Unclassified
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◢ Cdk9: Average

◢ SRX9144814: 3T3-L1

◢ SRX9144815: 3T3-L1

◢ SRX9144816: 3T3-L1

◢ SRX9144817: 3T3-L1

◢ SRX104410: ES cells

◢ SRX11717263: ES cells

◢ SRX11717264: ES cells

◢ SRX11717265: ES cells

◢ SRX11717266: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◣ SRX735282: Unclassified

◢ SRX735292: Unclassified

◢ Cdk9: STRING

Tcstv3
Greb1
Nkx2-6
Hexb
Txndc11
Il31ra
Kpna1
Cldn34d
Aldh9a1
Fyco1
Xcr1
Chac1
Pknox1
Calcoco1
Ddx23
9430015G10Rik
Phf12
Brox
Aida
Tmem125
Scrib
Olfr806
Abhd6
E030030I06Rik
Nudt13
Cd209a
Gm10710
Dchs2
Sspn
Olfr1274
Cotl1
Fbxw4
Prcc
Slc39a1
Nr4a1
Pprc1
Csf2ra
Cox8c
Kif2c
Nop14
Grk4
Fbxl18
Dusp2
Astl
S1pr4
Ncln
Hsph1
Ap2m1
Htra2
Dqx1
Usp48
Hspa5
Car5a
Banp
Phb
Ltb
Tnf
Lta
Sharpin
Maf1
Cyc1
Gm35339
Ccl1
Osbpl1a
Mrpl19
Clpb
Dync1i2
Proser1
Nhlrc3
Vmn2r4
Usp5
Cdca3
Asmt
Zfp513
Snx17
Eif2b4
Dhx33
Phlda1
Ppig
Fastkd1
Chmp4b
Tctex1d4
Btbd19
Unk
H3f3b
Mtg1
Gm525
Arl14ep
Clptm1l
Tmed2
Rilpl1
Mrpl44
Psat1
Ifna13
Slc39a4
Cpsf1
St3gal2
Rptor
Tmem88
Naa38
Cyb5d1
Trap1
Il2
Aadacl2fm1
Wdr70
Nup155
Tmem101
Lsmem2
Naa80
Ifrd2
Hyal3
Cnot1
Gtf2ird2
Rcc1l
Dffb
Cep104
Krr1
Tinf2
Nedd8
Gmpr2
Pex14
Dffa
Tmed9
B4galt7
Col6a6
Trp53rkb
Nabp1
Sepsecs
Syngr1
Rpl3
Chchd6
Sectm1b
Phf20l1
Setd4
Cbr1
Zfp945
Sphk2
Spaca4
Rpl18
Fam83e
Timm13
Lmnb2
Cwc22
Rpia
Tmem107
Prmt6
Dnah7b
Slc25a10
Mrpl12
Bicd2
Mrpl39
Ap1g1
Tdp1
Efcab11
Poldip3
Zfp207
5730455P16Rik
Wwox
Sympk
Foxa3
Gtf3c6
C87436
Coro2a
Ncbp2
0610012G03Rik
Stk25
Opa1
Slc35b4
H4c14
H3c13
H2bc18
Pigu
Tmem115
Btrc
Atp5o
Nprl2
Cyb561d2
Rassf1
Zmynd10
Plaa
Gm12657
Max
Pigq
Nhlrc4
Rel
Eapp
Trip4
Pclaf
Usp31
Chmp6
Jak2
Vrk1
Actr10
Hspa8
Rsph3b
R3hcc1l
Ankle2
Atf6
Ndufc2
Alkbh8
Rcc1
Med6
Scaf1
Rras
Mrpl20
Ccnl2
Frg2f1
Foxj3
Rdh14
Ssrp1
P2rx3
Pds5b
N4bp2l2
Gatb
Mmachc
Ccdc163
Slc7a5
Tbcd
Odc1
Celf2
Ormdl3
Nup153
Ube3c
Fam227b
Dtwd1
Zfyve19
Dnajc17
Thap3
Phf13
Dcp1a
Herpud1
Ap5s1
Prr5l
Commd9
Ctu1
Crebl2
Nme1
Secisbp2
Cks2
Tmem214
Mapre3
Zfp189
Mrpl50
Tex14
Pemt
Katnal1
Oasl1
Trib3
Mapkapk5
Nr1h3
Acp2
Atg101
Smim41
Mrpl21
Ighmbp2
Sec61a1
Tyw3
Cryz
Smarca4
Mrpl1
Cerk
Dcps
Zfp369
Rbl2
Wdr36
Rps20
Mff
Psmd7
LOC666331
Gm11634
Klhdc4
Calm1
Zfp637
Invs
Erp44
Cstf1
Aurka
Guf1
Slc7a11
Zfp36l1
Snw1
Dexi
Clec16a
Gsk3a
Eef1a1
Cdh12
Slc14a2
Gtf3c3
Pfdn5
Myg1
Eefsec
Tcof1
Ube2j2
Stau1
Rhebl1
Kmt2d
Zmat5
Uqcr10
Med27
Rexo2
Wdr25
Wars
Zfp729a
Gde1
Ccp110
Ppp2r5b
Atg2a
Gpha2
Rsad1
Mrps33
Cnot2
Pde6d
Cops7b
Snx27
Wfs1
Dhx16
Pabpc1
Ptp4a2
BC107364
Atg9b
Abcb8
Atp5g1
Arl4d
Srp19
Rpp30
Mad2l1bp
Gtpbp2
Gid4
Zfp949
Vmn2r102
Rad23b
Uqcrh
Lrrc41
H3c15
H3c14
H2ac19
H2ac18
Ctdp1
Asns
Lrrc59
Zar1l
Brca2
Pcbp1
Psmb2
Marchf5
Cpeb3
Nemf
Sectm1a
Trmt44
Acox3
Tmem11
Capn15
Cep128
Gsdma2
Arid1a
Ccdc126
Kbtbd7
Ppih
Rab1a
Get1
Rhot1
Aaas
Zbtb37
Vpreb1
Top3b
Igll1
Gm3448
Gm3417
Pcif1
9030025P20Rik
Tspan4
Polr2l
Cd151
Mrps15
Rabac1
Mrm3
Glod4
Ints4
Zpr1
Bud13
Peli1
Serpinh1
Dus1l
Map1lc3b
Rps21
Dhrs7
Ccpg1os
Ccpg1
Zc3h12c
Zfp791
Olfm1
Ddx47
Ankrd46
Cdkl4
Brd3
Fam53c
Cdc25c
Cipc
Ptpn6
Grcc10
Agk
Tbc1d31
Kdm5a
Ccdc77
Wasf1
Cdc40
Zfat
Terf2
Lemd2
Rnf123
Mst1
Ncbp3
Psmb5
Psmb11
Smg8
Srp68
Galr2
Mcl1
Rabggtb
Msh4
Tbrg1
Poglut3
Lcorl
Cdk9
Tchp
Slc25a32
Dcaf13
Stx18
Rab5c
H4c12
H2bc15
H2ac15
Gem
Pten
Map2k5
Wnk1
Kat7
Cdkn2aipnl
Cenps
Stx16
Ndufc1
Naa15
Lars
Metrn
Haghl
Ccdc78
Antkmt
Slc39a13
Thap11
Nutf2
Cenpt
Dnajc11
Tmem167b
Uqcc3
Ubxn1
Pomp
Nbr1
Brca1
M6pr
Mrps25
Dpagt1
Hmbs
H2ax
Dguok
Taf5
Zc3hc1
Mars1
Pus1
Ep400
Hmx2
Exoc2
Bub3
Gne
Mfn2
Nfkb1
Tmem127
Ciao1
Mettl15
Kif18a
Ulk2
Fam166a
Stpg3
Rnf44
Nvl
Cnih4
Borcs7
Cops8
Pigg
Cdhr2
Nelfb
Iars
Zfp870
H2bc6
H1f4
Sp1
Nfat5
Eif2b5
Ufl1
Med4
Vps50
Hepacam2
Pdia6
Scfd1
2210016L21Rik
Bod1
Slc27a4
Ptcd3
Polr1a
Cops7a
Slc24a1
Ints14
Ubox5
Fastkd5
C2cd2l
Sars
2700062C07Rik
Naa60
Fbxo15
Timm21
Sfi1
Eif4enif1
Rabl6
Ccdc183
Tsnaxip1
Ranbp10
Rnf6
Cdk8
Shmt2
Ndufa4l2
Ttc13
Arv1
Tmed10
Snrpd1
Esco1
Inpp5b
Btg1
Rbm17
Tmem43
Chchd4
Tsfm
Snrnp27
Eps15
Dhx30
Commd2
Zbtb17
Srarp
Skp2
Lmbrd2
Sirt2
Nfkbib
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Gtf2a1
Get4
Ppp1r11
Fra10ac1
Znrd1as
Znrd1
Nol10
Pxk
Eif4ebp1
Bod1l
Srrd
Hps4
Ppp1r15b
Ube4a
Rab30
Hnrnpa2b1
Cbx3
H2bc21
H2ac21
H2ac20
Drg2
Ptrhd1
Cenpo
Ythdf2
Bcat1
Zfp981
H3c3
H2bc3
H1f2
Rnf10
Coq5
Mettl25
Ccdc59
Dmap1
Ints9
Hmbox1
Eif2b3
Pkmyt1
Paqr4
Cluh
Yars
S100pbp
Mrps35
Ldah
Wdr61
9130401M01Rik
Vamp1
Trmt12
Adck1
Idh3b
Mxra8
Aurkaip1
Ciao3
Rprd2
Ptprcap
Wdr4
Ndufv3
Pdcd1
Ifrd1
Gmfb
Cgrrf1
Tent5c
Ncdn
AU040320
Cnot10
Kmt2e
Zc3h6
Retsat
Elmod3
Spty2d1
Lancl2
Trmt10a
Mttp
Map3k4
Pycrl
Gfus
Cdk5rap2
Stim2
Csnk1a1
Nelfa
Rad50
Pspn
Clpp
Alkbh7
Acer1
Zfp661
Mrps5
Eif3g
Taf12
Gmeb1
Kpnb1
Fam193a
Nup54
Cul2
Ndufs4
Leng8
Rps27l
Rpl31
Nudt15
Tbck
Aimp1
Nop16
Higd2a
Tecpr1
Napepld
Rps8
Pdcd7
Mrpl58
Lpcat2b
Btbd8
Smn1
Ubqln4
Rab25
Lamtor2
Inpp5k
Slc35a1
Tgm4
Trmo
2610001J05Rik
Chpf2
Abcf2
Gtf2h3
Eif2b1
Dnajb9
Lrif1
Trdmt1
Il2ra
Mphosph10
Mcee
Nmt1
Srsf2
Mfsd11
Mettl23
Rab42
Dnajc16
Casp9
Dnttip2
Tmem94
Man1b1
Zdhhc3
Exosc7
Gas2
Srprb
Psmd12
Pitpnc1
Rundc1
Ptges3l
Aarsd1
Taco1
Tut1
Zzef1
Cyb5d2
Il10
Gspt1
Thrap3
Zfyve1
Slc4a2
Cdk5
Ndc1
Tomm22
Fam219b
Atp5g2
Zc3h4
Bms1
Pa2g4
Zfp335
Cep120
Kcnt1
Epc1
Ndufb8
Hif1an
Sec31b
Tdg
1190007I07Rik
Sfxn5
Tspoap1
Ttll11
Ogfr
Mrgbp
Col9a3
Coa8
Bag5
Rps19bp1
Atf4
Fbxw8
Taf11
Anks1
Exo5
Nbas
Stc2
Dgat1
Ahcyl1
Isy1
Wdr59
Srek1ip1
Cwc27
Wbp2
Unc13d
Exoc7
Thap4
Atg4b
Oscar
Ndufa3
Ccn4
Zbtb21
Prmt3
Vwa8
Tcte3
Gm3435
G3bp1
Atox1
Coq9
Ciapin1
Cnot4
Prkacb
Mtrex
Dhx29
Trmt5
Slc38a6
Zfp691
Fan1
Eif5
Spen
Rfc4
Haspin
Kif13b
Plgrkt
Cd274
Arf6
Cited2
Gtf2b
Vta1
Timm44
Klhdc2
Wasf3
Man2c1
Mrps7
Mif4gd
Gga3
H4c3
H1f6
Znfx1
Tarbp2
Npff
Map3k12
Trpc4ap
Tmem242
Rad1
Brix1
Ccnl1
Nufip2
Srsf1
Snrpc
Rbsn
Ptcd2
Mrps27
Mkrn3
Wdr34
Slc18b1
Rps12
Med7
Alg1
Tatdn3
Nsl1
Itpr1
Zbtb45
Polr2m
Ppp6c
Ndufaf5
Esf1
Dnajb12
Mtmr2
Uchl5
Ro60
Doc2g
Ints3
Prox2
Dlst
Gtf2f2
Ndufv1
Psca
Ddost
Jrk
H3c11
H2bc22
H2ac22
H1f5
Nsrp1
Gabpb2
Slc33a1
Brf1
Vcpkmt
Dph2
B4galt2
Atp6v0b
Abcc5
Zfp46
Fcmr
Usp16
Dcaf10
Cd44
Rnf220
Zfp738
Olfr1416
Ndufa10
Acsf3
Tgm1
Rabggta
Cpox
Taf1d
4931406C07Rik
Wdr45b
Brpf1
Prpf4
Cdc26
H3c2
H2ac4
H4c11
Commd1
Cct4
Rab33b
Chka
Ndufs3
Kbtbd4
Ankrd40
Rtn2
Elp6
H4f16
H2aj
Mat2a
Tkfc
Ddb1
Snrpd3
Gucd1
Rpl35a
Lmln
Iqcg
Sec22b
Ranbp6
9930021J03Rik
Mpzl3
Rrp1b
Hsf2bp
Actb
H4c9
H2bc12
H2bc11
H2ac12
H2ac11
H3c10
H2bc13
H2ac13
H2bc14
Hnrnpab
Ndfip1
Knl1
Bcl2l13
Psmg3
Gosr1
Togaram1
Klhl28
Nek9
Rars2
Orc3
Pcbd2
Brms1
Edem2
B4gat1
Zbtb11
Rpl24
Vdac2
Hacd2
Tmem245
Cyb561d1
Atxn7l2
Tmem260
Tpgs1
Madcam1
Cdiptos
Cdipt
Ndufab1
Lef1
Tm7sf2
P4hb
Arhgdia
Slc16a1
Zfpl1
Vps51
Tmem262
Cdca5
Wfdc21
Heatr6
Ube2v1
Rad18
Zfp317
Hinfp
Psma1
Prkcsh
Ccdc151
Zfp748
Spink5
H4c4
H3c4
H2bc7
H2ac7
Rps27rt
Rab13
Pex3
Adat2
Tfeb
Foxk2
Zfp706
Ppp1r12c
Xrra1
Spcs2
Taar6
Dmac1
Taar7a
Tob1
H4c17
Cd80
Adprh
Hnrnpa3
Rpl29
Acy1
Rps24
Polr3a
Atxn1l
Mterf4
Ap2s1
Rsl24d1
Ndufa9
Akap3
Notch2
Rdx
Rps7
Atxn2l
Cacybp
Cirbp
Atp6v1h
Tab1
Rplp1
Ccnd3
Taf8
Cox7a2