ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX735310 | Th2 Cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◢ Cdk9: Average

◢ SRX9144814: 3T3-L1

◢ SRX9144815: 3T3-L1

◢ SRX9144816: 3T3-L1

◢ SRX9144817: 3T3-L1

◢ SRX104410: ES cells

◢ SRX11717263: ES cells

◢ SRX11717264: ES cells

◢ SRX11717265: ES cells

◢ SRX11717266: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◣ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◢ SRX735292: Unclassified

◢ Cdk9: STRING

Tcstv3
Greb1
Brox
Aida
Olfr855
Olfr854
Txndc11
Kpna1
Pknox1
Zfp949
Nkx2-6
Hexb
Il31ra
Fbxw4
E030030I06Rik
Suz12
Cldn34d
Cd209a
Acacb
Abhd6
Rps29
Lrr1
Aldh9a1
Nemf
Shc1
Flad1
Cks1b
Lenep
Sfi1
Eif4enif1
Cox8c
Olfr1274
Fyco1
Xcr1
Rfng
Gps1
Olfr806
Rsph3b
Osbpl1a
Ifna13
Gm10710
Dchs2
Il2ra
Asmt
Sspn
Tnp2
Socs1
Prm3
Prm2
Gm3448
Gm3417
9030025P20Rik
E2f2
Nabp1
Csf2ra
Stat1
Thumpd3
Copz1
Dnah7b
Abca3
Abca17
Ms4a6d
Wasf3
Fkbp1a
Mcl1
Cdkn2aipnl
Cdk5rap3
Wwox
Tex14
Scrib
Malt1
Tgfbr1
9430015G10Rik
H4f16
H2aj
Olfr524
Zfp945
Epop
Zcwpw2
Azi2
Pif1
Plekho2
Prkce
Cdk17
Asb2
Rasip1
Izumo1
Fut1
Fgf21
1600014C10Rik
Prl3c1
Ankdd1a
Fmnl3
Prkdc
Mcm4
Kif2c
Mrpl44
Npffr2
Acads
Unc119b
Oasl1
Aff4
Fam220a
Mterf1b
St3gal2
Sema4a
Xirp1
Ccin
Tmem125
Ddx23
Rsph3a
Prxl2b
Dpy19l4
Tspoap1
Fam3c
Rpia
Col6a6
Pafah2
Fam227b
Dtwd1
Mterf1a
Sytl3
Bcl3
Lyl1
Usp48
Rbm17
Ddah2
Clic1
Msh5
Tmem115
Nprl2
Cyb561d2
Ahcyl1
Rassf1
Zmynd10
Spns1
Lat
Gm13286
Gm13283
Gm13271
Ppard
Acod1
Snrpd3
Gucd1
2610001J05Rik
Fbxo15
Timm21
Il10
Hemk1
6430571L13Rik
Gatb
Scgb1a1
Tcte3
Gm3435
4930550C14Rik
Tsen2
Il20
Pex14
Dffa
Basp1
Foxo1
Il1f10
Ermard
Ccr4
Ncmap
Taf1c
Adad2
Gtf3c6
Atp5o
Vps18
Qrich2
Snx18
Rad54l2
Dnajc11
Mief1
Cpsf4l
Ptp4a2
Ythdf2
Wbp2
Unc13d
Btg1
Ankrd44
Sec24a
Sar1b
Arhgef2
Tha1
Ermn
Ifrd1
Ptges2
Gnai2
Lif
Mgat5b
Prss56
Celsr1
Zfat
Ctdp1
Rangap1
Ankar
Cltc
Ethe1
Pik3cd
Ago2
Dhx8
4930415O20Rik
Gpr61
Gnai3
Il24
Ppdpf
Lrwd1
Alkbh4
Nek2
Pacsin1
Calcoco1
Mpig6b
Ly6g6c
Trp53rkb
C5ar1
Arl4d
Car5a
Banp
Rbm4b
Chst2
Ap1g1
Wasf1
Cdc40
Vps29
Rad9b
Pds5b
N4bp2l2
Exoc2
Cdc42bpg
Gna15
Septin9
Prkcq
Ctnnb1
Cebpb
4932438H23Rik
Ppp1r3b
Dip2b
Aen
Rnaseh1
Itk
Rtp3
Bcr
Slc27a4
Ddx20
F2rl2
Nme1
Med27
Shmt2
Ndufa4l2
Siglec1
Cibar2
Nbeal2
Il7r
Islr2
Cenps
Ptk2b
Bcl2l14
Epc1
H4c11
Ncor1
Pigl
Irak2
Olfm1
Nyx
Sdhb
Phf12
LOC666331
Gm11634
Haspin
Cfap45
Psmb10
Ctrl
Vti1b
St3gal4
Zscan10
Taf12
Gmeb1
Adnp
Dusp2
Astl
Trpv4
Med23
Sec22c
Chordc1
Rubcn
Fyttd1
Rhbdf2
H3c3
H2bc3
H1f2
Eapp
Ccdc9
Crebl2
Nudt13
Sik2
Lsmem2
Snrpa1
Sema3b
Csf2
Tsnaxip1
Ranbp10
Id2
Ccpg1os
Ccpg1
Map4k5
Atl1
Rdm1
Zfp637
Sharpin
Maf1
Cyc1
Gm35339
Zfp91
Lpxn
Mex3a
H1f3
H3c6
H4c6
Prcc
Rps21
Palb2
Dctn5
Ubqln4
Rab25
Lamtor2
Tnfaip3
Faap20
Ramp3
Krr1
Ifnab
Gorasp2
Rfx7
Olfr525
Clec2d
Chmp4b
Trmt10c
Pcnp
Pprc1
Tmem39a
Gramd4
Batf
Gnb1
Scd2
Gipr
Snrpd2
Qpctl
Ndufs3
Kbtbd4
Pdxp
Fhit
Gm13285
Gm13290
Gm13289
Tmsb4x
Ifnz
Gm13272
Treml2
Ly9
Wdr43
Clpb
Trim50
Fkbp6
Carns1
H2-Q8
H2-Q6
Rplp0
Gcn1
Lrrc32
Rai1
Calm1
Tmem11
Exosc6
Tinf2
Nedd8
Gmpr2
Tcea1
Zscan22
Ppan
Angptl6
Shfl
Lilrb4a
Pank4
Hes5
Mettl25
Ccdc59
Pa2g4
Rpp30
Lst1
Aif1
Cerk
Fbxo46
Bhmg1
Fmnl1
Rexo2
Bola3
Slc36a1
Midn
Atp5d
Cbarp
Trim7
Tob2
Arhgap25
Sox5
Pecam1
Smarcal1
Gimap1
H2bc6
H4c4
H3c4
H2bc7
H2ac7
H1f4
Nsfl1c
Slc33a1
Polr3b
Trmt2a
Ranbp1
D030056L22Rik
Ppp1r9b
Samd14
Furin
Tac4
Ablim1
H4c3
H1f6
Nsmce1
Twf2
Taf10
Rrp8
Ilk
Tpp1
Mrm3
Glod4
Zbtb4
Slc35g3
Polr2a
Unk
H3f3b
H3c15
H3c14
H2ac19
H2ac18
H4c14
H3c13
H2bc18
H4bc24
H2bc23
H2ac24
H2ac23
Srsy
Gm21828
H4c18
Cxcl1
Rps19bp1
Atf4
Eif1
Cwc22
Errfi1
Actb
Mt1
Mt2
Polg2
Ddx5
Cep95
Ubc
H2bc8
H2ac8
Mat2a
Jund
Iqcn
Gm525
Setd4
Cbr1
Actg1
Fth1
Aadacl2fm1
Klf7
H3c11
H2bc22
H2ac22
H1f5
Eef1a1
Ube2a
Prdx2
Junb
Hnrnpa2b1
Cbx3
H3c8
H4c9
H2bc12
H2bc11
H2ac12
H2ac11
Tob1
Ier3
Flot1
Ttc39d
Srsf7
Ppp1r10
Mrps18b
Atat1
Hspa8
Zfand5
Hspa5
Arf6
H4c17
Syngr1
Rpl3
Dusp1
Tsc22d1
Pgk1
Nfkbia
H2ac10
H4c8
Egr1
Poldip3
Ppia
Ubb
Slc35e3
H3c2
H2ac4
Raly
Mdm2
Vim
H2bc21
H2ac21
H2ac20
Id3
Fam53c
Cdc25c
Ier2
Nr4a1
Ftl1
Bax
Zfp143
H4c2
Sp1
H4c1
Ddit4
H3c1
H3c10
H2bc13
H2ac13
Cited2
Srsf2
Mfsd11
Thbs1
Zyx
Adamts1
Fbxl18
H2bc14
Dusp5
Vcl
Chac1
Fus
Zfp36l1
Cirbp
Mettl23
Sirt4
Sdc4
Cebpd
Cdh12
Sqstm1
Slc38a2
Id1
Herpud1
Cdkn1a
Nfkbiz
Fam174c
Btg2
Tpt1
Pnrc1
Fos
Ccnl1
Zfp36l2
Prdx1
Lmna
Ulk2
Sympk
Ppp1r12a
Txnip
BC005537
Dnajb4
Ccn1
Znfx1
Lima1
Vmn2r4
H1f1
Pcif1
Tuba1c
Uspl1
Srsf5
Odc1
Efcab2
Yeats4
Pald1
Tmem167b
Nfat5
H2-DMa
Ptp4a1
Hsp90aa1
Tmem107
Plk2
Slc35b2
Sgk1
Dpagt1
Tuba1a
Sik1
Serpine1
Rbm39
Litaf
Slc14a2
Fubp1
Tpm1
H2bc4
H2ac6
Hmbs
H2ax
Rgs2
Srsf6
Brd2
Dnaja1
Rps20
Dnajb1
Myl12a
Ddx3x
Pcbp1
Srsf3
Slc25a4
Palld
Hsp90ab1
Zfp36
Esr1
Tuba1b
Slc3a2
Ptgs2
Ywhaz
H3c7
H2bc9
Fn1
Tti2
Rhob
Tiparp
Tmem123
Nup62
Il4i1b
Atf5
Timp2
Ints6
Vmn2r102
Ccl7
Serinc3
B2m
Hnrnph1
Zfp207
5730455P16Rik
Cdc42
Tecpr1
Rptor
Zfp513
Snx17
Eif2b4
Plekhg2
Pabpc1
Erdr1
Klf6
Zfp869
Usp4
Gpx1
Eif5
Phlda1
Rcc1
Ccl2
1810013L24Rik
Taf4
Tra2a
Gtf2b
Setd5
Calm2
Pole4
Dync1i2
Kmt2e
Cnot1
H2-L
H2-D1
Col1a1
Dstn
Itga5
Tmem18
Mpdu1
Hmox1
Eif4a1
Atp5g1
Larp4
Napepld
Phlda3
Hnrnpab
Tmem50a
Syf2
Rsrp1
Insig1
Myh9
Itgb1
Smim10l1
Med1
Cdk12
H4c12
H2bc15
H2ac15
Ncl
Hexim2
Rsrc2
Kntc1
Ier5
Ppbp
Amn1
Selenop
Rap1b
Stat3
Zfp963
Pdlim5
Flna
Emd
Sde2
Coq10b
Aaas
Ppp1r15a
Plekha4
Lmbrd1
G3bp1
Atox1
Trib3
Scaf1
Rras
Tmed2
Rilpl1
Csf1
Urgcp
Lag3
Gcat
Zfp791
Pus1
Ep400
Hmgb2
Nfe2l2
Zfp1
Tmem129
Tacc3
Slbp
Gapdh
Hif1a
Rnf10
Coq5
Esyt2
Zc3h6
Ndufs7
Resf1
Zfp868
Mbd6
Ddit3
Pkd1
Jun
Crem
Ptms
Retsat
Elmod3
Mknk2
Rad23a
Hgsnat
Slc25a3
H1f0
Eef2
Dapk3
Slc18b1
Socs3
Zfp655
F3
Wsb1
Pim3
Wdr81
Calr
Mrpl20
Ccnl2
Matr3
Atp6v0c
Amdhd2
Cxcl5
Tmsb10
Gem
Senp3
Tctex1d4
Btbd19
Nufip2
Sptan1
Rps12
Pias4
Nfkbil1
Ddx39b
Atp6v1g2
Zbtb37
Rnft1
Uqcc3
Gm13287
Gm13279
Gm13278
Gm13275
Actr3
Wnk1
Eif3a
Eif3c
Eif4g2
Cfl1
Crebzf
Ppp1r2
Gls
Nip7
Irf1
Gm13288
Cog8
Opa1
Baiap2
Kmt5b
Fam166a
Ywhag
Fstl1
Teddm1a
Glul
Dgat1
Tra2b
Taf13
Rpl10a
Stpg3
Pdlim7
Zbed5
Phkg1
Chchd2
Csrnp2
Rheb
Gtf2a1
Ppig
Son
Gm36712
Gart
Snx5
Mgme1
Egr2
Ugdh
Spen
Piezo1
Map2k2
Creb3l3
Sec61a1
Gadd45g
Pdss2
Rabgef1
Bach1
Arrdc2
Ctsl
Rnf19b
Mtf2
Atp2a2
Ldha
Slc9a1
Slc39a4
Fosb
Cpsf1
Birc2
Raf1
Ptpn6
Grcc10
Ptpn2
Csnk1a1
Chrac1
Srsf1
Hnrnpa1
Cbx5
Zfp866
Map1lc3b
H2-K1
Ndel1
Hnrnph3
Top1
Morf4l1
Tlcd2
Gadd45a
Ddx59
Cds2
Sp3
Wdr70
Lbh
Klf2
Mthfd2
Mob1a
Ptma
Gm14595
Gm14590
Sfpq
Slc2a1
Kdm6b
Slc39a10
Phf23
Gabarap
Dvl2
Slc39a1
Ep300
Rock2
Nfyc
Homer1
Kctd5
Ubxn1
Nup155
Arl14ep
Mylip
Idh3b
Tmem230
Pcna
Txnl1
S100a10
Pdf
Sod1
Eif2b5
Gsto1
Mrpl45
Mbnl1
Txn1
Fitm2
Arntl
Nsrp1
Zc3h10
Rpl41
Chmp6
Phb
Nsd3
Letm2
9530077C05Rik
Arih1
Vdr
Sub1
Dynll1
Cpeb2
Hmgn2
Cd80
Adprh
Gadd45b
Gpx4
Pbld2
Ahnak
Vegfa
Hipk3
Atp6v1h
Ifi211
Sppl2a
Sf3b1
Ufl1
Selenot
Egr3
Htra2
Dqx1
Ccdc88a
Fgfbp3
Btaf1
Galk2
Cops2
Wbp4
Elf1
Acta2
Gabpb2
Fasn
Gm13277
Sepsecs
Eif4e2
Chrng
Sned1
Rabggtb
Msh4
Frmd6
Hdlbp
Lrrc8a
Polr2m
Col4a2
Col4a1
Slc5a3
Mrps6
Aacs
Rpl9
Lias
Tmem175
Slc25a32
Pten
Gak
Dcaf13
Rab5if
Zbtb11
Rpl24
Gstp2
Gstp1
Rps3a1
Ets2