ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX059713 | VCaP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◣ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

RAE1
PRICKLE1
PMF1-BGLAP
PMF1
KDR
NUDT3
SLC45A4
ZBTB7B
SCGB3A1
ARID3B
DNPEP
LGALS8
NGB
GSTP1
CALML5
DUX4
SEPTIN9
PMM1
CXCL8
APBB2
GRM3
UMODL1
LOC114841035
FKBP2
VEGFB
KSR1
FRMPD1
TENT2
RUVBL1
EEFSEC
APP
SMYD1
LAMA3
LFNG
SLC22A10
CREB3L1
SELENOS
TNK2
MTRNR2L1
HDGF
PCDH7
KCNQ3
TMEM40
HIGD1C
SAXO2
EFL1
POLR2J3
TMEM216
GABRA2
SCUBE3
ZBTB18
POLR2J2
SASH1
MAMDC2
NFIC
EIF4EBP1
AGPS
ISX
CFAP74
FKBPL
ATF6B
UGT2B10
NPTX2
WDR74
UTRN
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
PDGFA
PPP1R15B
MTNR1A
SCIMP
ITLN1
ULK4
TGFB3
IFT43
DUSP6
LIMA1
HDGFL2
TGM4
RHOH
SOCS2
SKIDA1
OR13G1
JPH3
ATXN2L
PLIN1
SBSPON
FAM214A
MBOAT2
MUSK
BDNF
MAX
LPCAT3
RAB36
NOVA2
TLK1
ALDH3B2
KRT3
MILR1
STAU2
CCZ1
TACR1
ERCC1
B3GALT5
UGT2B28
KCTD7
SLC16A8
PYCR2
SUPT7L
SLC4A1AP
PALLD
KIAA0408
DAB1
ZNF771
PRRT1
PPT2
LNX1
DPP9
RAB37
SHLD2
GLUD1
TMEM87A
GANC
SRSF10
TIMP2
MMP17
MSX1
MFSD4A
C1QTNF9
FAM222B
ZCCHC14
SPAG9
DDX19B
AARS1
ACSBG2
STX16
SCAMP2
PEX10
REG1A
CDCA7L
TPCN1
FAM234B
FOXN4
UNC45B
MLF1
RRBP1
OR1L1
STC1
EDARADD
C3orf14
TMEM217
TBC1D22B
ARHGAP22
ARHGEF7
ZNF559-ZNF177
ZNF559
MX1
STK32A
NUP160
DIPK1A
NBPF4
RFPL3
SUSD4
ITPRID1
GLYATL1
LRRC25
FBXL3
MTRNR2L8
CPLX1
WIZ
DPY30
KRT4
LGALS7B
NBPF6
RB1CC1
SHOX2
RSRC1
SNX16
FNDC10
LAX1
OTOL1
PFKFB3
TFF1
PIWIL1
B4GALT7
PRKAG2
HIVEP1
OR2W5
MAP7
TEPSIN
NDUFAF8
TYW3
CRYZ
SGK3
LTBR
SCNN1A
DAPK1
ZNF155
ST6GALNAC4
MTRNR2L2
MSH3
DHFR
COL23A1
MAPKAPK3
SPDEF
SIRT4
POLR3GL
LIX1L
ANKRD34A
IMPDH1
DAOA
ZZZ3
IFRD1
DBP
MAPK12
ANGPT1
SPIN1
MEIS2
SYK
PAX6
TRNP1
TLE4
TAOK3
ADAMTS3
VAV3
IAPP
SKIL
ESRP2
UPK3BL1
TRABD
UPK3BL2
TMEM237
SAMD12
FBXL20
MYH10
QSOX1
CYP3A43
ELAC1
SRI
ECE1
C6orf58
NWD1
SH2D6
NBR1
TASOR
RAB32
MRPL1
KCNIP2
RPS27
RAB13
KRTDAP
PAK4
TBPL1
C17orf75
PAFAH1B2
MYO7B
BACE2
ETV5
TBCEL-TECTA
TBCEL
TRIQK
ARHGEF38
RGPD2
RGPD1
OPRL1
LKAAEAR1
C7orf65
WDR77
ATP5PB
RXFP4
PYGL
ERICH5
IGFBP7
PKP2
ZBTB20
RFESD
C11orf80
FFAR2
TLE3
RIN2
GZMB
CD8B
CPT1A
LAPTM4B
SOD2
TFCP2L1
STPG3
NELFB
KLK3
TIAM2
PER1
VAT1
RND2
CD177
FRG2
B3GNT6
DCDC1
TMEM92
VPS37C
CFD
EPHB3
FAM53C
CDC25C
IGIP
SLC25A45
FRMD8
XDH
SUN5
SLC30A8
BPIFB2
TNFSF15
MEMO1
MGAT5
SLC30A4
RUFY3
CTXN3
RND1
SSTR5
CDRT4
SMIM13
MAPK9
DHRS13
PRSS23
C2orf73
PANK1
LDHC
ARHGAP40
TCAF2
PRMT8
GUCA2A
TSPAN5
SIDT1
ELL2
SEMG2
ACACA
OR4C3
LDLRAD4
ERGIC1
HERC5
GGA1
NIBAN2
ENPP2
LITAF
ZMYND8
TRAPPC4
RPS25
PIK3AP1
CYRIB
MTHFS
ATL3
C11orf24
AHCY
STARD13
PRLHR
LTA4H
RNF19A
AKNA
ERICH2
MAP2K6
BIK
ARID5A
ZNF200
LDLRAD1
CMBL
RAB11A
TDGF1
GAL3ST1
SPRED2
KAT6A
KIAA1217
NOXA1
PPFIBP2
NKX6-3
FURIN
NR1D1
TMEM45B
CEACAM3
GPRIN2
ASPN
PMVK
KIAA1522
MACROD1
PRRC2B
MSH5
CLIC1
NIPAL2
MB
GRHL2
FGF19
PIWIL2
DNAH5
HSPA4
MIA3
AMBP
STAT2
APOF
BCL6
CERK
NAV3
MYEOV
BCL2L13
SPAM1
NEDD4L
GFRA3
ATP6V1G1
EBAG9
THRSP
TJP2
DCAF10
ACOX2
TMPRSS11F
AMBN
MKNK2
SLC2A5
TTC3
PIGP
CDS1
KCNH8
FAM47E-STBD1
FAM47E
PRSS27
CEP85L
BCL2L1
SCRN2
PEAK1
HMG20A
ARSG
GMNN
ADAM17
CCDC74A
TCP11L2
SLAIN2
CARS2
NFKBIL1
DDX39B
ATP6V1G2
TMEM210
LRRC26
COLCA2
HSD17B6
GGACT
YBEY
MCM3AP
SLC39A13
POLDIP3
HELB
TRIM44
SLC48A1
FBXO32
KLF9
TMTC2
TYRO3
PNLIPRP1
SMG6
ZBTB45
SMIM34A
NREP
OSGIN2
ZBTB21
SERPIND1
FAM107B
PDZK1
CD276
IKZF3
HEXA
PHF23
ALDH18A1
GRB7
PDXK
LAMP1
HNRNPA2B1
CBX3
GET4
SLC39A10
EPC2
WDTC1
AP5Z1
DDX17
EIF4G2
STRBP
SLC25A25
NAIF1
GABARAP
SEPTIN7
TMEM199
POLDIP2
WASHC2A
KAT5
TES
WASF2
MRPL45
WASHC2C
ERAL1
UBE2Q1
SPATA25
NEURL2
CTSA
GPR137
BAD
MARCHF9
CDK4
HAGH
FAHD1
SFSWAP
GSK3B
ATP6V0D1
AGRP
NAGPA
UVRAG
RSF1
AAMDC
CD300LF
SPNS1
MSMO1
CRBN
RPGRIP1L
FTO
UBE3B
DAGLA
TRMO
RBBP8NL
RBM48
PEX1
MTBP
MRPL13
RALGDS
FRG2C
PSMD3
MDM2
TXNRD1
SUMF1
BCL3
SLC35B1
EFNA3
SYNGAP1
CUTA
MTHFR
IL1R1
CLCN7
HES1
SMARCD2
USP49
TOMM22
C1orf174
DDX42
CCDC47
SRSF1
RPUSD4
FAM118B
C8orf33
GBA
ILF3
STARD3
TRIB1
ISY1-RAB43
ISY1
POLR3F
DZANK1
SERPINI1
PDCD10
COMMD9
RBBP5
ASB2
CLCN6
ABCC10
MAN1B1
RAPGEF3
LZTR1
STAT6
TSR3
GNPTG
MACC1
THAP7
ANGPTL4
VPS50
HEPACAM2
ATF3
UNC13D
CD55
GADD45A
RHOBTB2
VPS33A
BHLHE40
APOBEC3B
PTPRF
FAM72C
IRF2BP2
SRGAP2B
FAM72D
SQSTM1
MIEN1
OSGEP
APEX1
ZNF335
SLC35A5
ATG3
PGAP3
ERBB2
RARB
TBL1X
TMC7
TRMT2A
RANBP1
CCDC59
PGLYRP4
MCOLN1
FANCA
PSMB7
POLR2J
CLPTM1
AURKAIP1
SUPV3L1
SUPT6H
SDF2
GSR
TET3
SNRPE
TFPT
PRPF31
CARD16
IDH3B
RPS26
RAD9A
TRA2B
PDGFB
RDH5
ITGA7
BLOC1S1
SPINK1
SMN2
SMN1
ERICH4
DMAC2
YJU2
NUP214
SRGAP2
FAM72A
TBRG4
WASHC5
NSMCE2
MOCS3
DPM1
VIRMA
GET3
ZNF408
ARHGAP1
ELFN2
C5orf51
SALL4
RGS3
XPO7
UPP1
KMT2E
CLN3
APOBR
TRAF4
MRTO4
EMC1
HPS5
GTF2H1
INO80C
PDAP1
BUD31
SLC25A53
TSFM
TOP3A
SMCR8
SENP1
PFKM
TMEM205
RAB3D
CCDC159
ANXA2
YAP1
CYP2A13
CDKAL1
GLTP
IRF2BPL
ENTPD4
MYCL
MFSD1
PPP6R1
ZNF165
SAP30BP
RECQL5
CASC3
ATP5MF-PTCD1
ATP5MF
NME1-NME2
NME1
DOK7
SLC4A2
CDK5
SLIRP
ALKBH1
DVL2
PAXBP1
TRMT1
NACC1
C16orf91
ZSCAN22
PCIF1
RARG
TXN2
MMP13
U2SURP
CEP162
ZNF383
HUS1
UBE3C
ZDHHC6
VTI1A
AMDHD2
ST7
EIF2D
CDK12
ARHGAP32
FLOT2
TAS1R1
NOL9
WWOX
CELA3B
SLC25A11
RNF167
AXL
ZSCAN25
CCDC88B
BIRC2
ATAD2
PMS1
ORMDL1
MTRNR2L9
ZBTB7C
SMG7
GATB
MEF2C
GFM1
DIP2A
SPAG16
ITFG2
IER3
FLOT1
TM2D2
MRPS15
ADAM9
FAM83A
PTBP1
GTPBP6
KRR1
SUMO3
UBE2B
CDKL3
PIP4P1
RTF2
CLSTN1
DDX41
DNAJC11
JMJD7-PLA2G4B
JMJD7
NUP107
ZNF668
VAC14
SEPTIN5
GP1BB
INTS10
KAT8
SH3GL1
CHAF1A
NDUFA2
IK
KLF10
WBP2
E2F6
NDUFA4
PHAX
ZNF576
IRGQ
TRIP4
CCNT1
ARID2
LANCL2
ECH1
ANKS6
LRRC47
UBAP2L
C1orf43
SEMA3B
SSBP1
ADGRB3
MOB1B
CCDC97
THOP1
SGTA
MIER1
ATG9B
ABCB8
DAZAP1
ARID5B
RAD51AP1
C12orf4
RRP15
PSME3
UBE2I
HNRNPH2
TNC
KANSL3
FER1L5
SLK
SRGAP2C
KCNMA1
FAM72B
FGGY
FSCN1
ACVR1B
STX1A
SUMO2
NGDN
BANP
TPP1
ALG6
THEMIS2
HM13
SCAMP5
BSG
PPWD1
CENPK
UBQLN1
KDM7A
WDR62
THAP8
OTUD7A
TRIM16L
SSH1
THRAP3
VGLL4
USP30
XRCC5
ETV4
SLC33A1
CMIP
BIRC3
ADAM23
NAPB
EPS8
C19orf33
SPATC1L
RPTOR
STX6
TBC1D30
GPATCH3
GNS
SMARCA4
MRPS7
GGA3
BAIAP2
RAB3IP
ATG14
LARP1
ZNF2
FLYWCH1
TSN
PSMD1
TMEM116
ERP29
ADGRL1
VPS11
ITGB3BP
EFCAB7
MEOX1
CACTIN
ZNF524
RABGAP1L
IGLL5
FIZ1
ELP3
TIPARP
EIF5A2
ANKMY1
TMEM208
LRRC29
SLC6A9
BLOC1S4
B4GALT2
ATP6V0B
DENR
PPP5D1
CALM3
TNNC2
SNX21
ATP6V1H
PRMT3
PLD1
STMN3
RTEL1
PMEPA1
NUDCD3
DICER1
MAP3K7
MRPS11
MRPL46
NFE2
BAX
BCAS1
ECHDC1
ZNF497
RXRA
SBK1
FAIM
NSD1
ZCCHC4
SPHK2
RPL18
FAM83E
PARD6B
STRA6
KDM3A
QRICH1
NOXO1
GFER
TRUB2
COQ4
NPEPPS
RPS11
OAZ3
MRPL9
SCYL3
RMND1
ARMT1
NCBP2AS2
NCBP2
PSMD5
EIF3F
TNPO3
TEX46
PLAGL1
KDM1A
AP2A2
PHF19
SF3A3
PRKRIP1
GPRC5A
TFDP1
DDX23
VWA7
TGIF1
RHOD
NOL8
CENPP
LMAN2
GRHL1
PUS10
PEX13
NDUFAB1
TMEM18
LYPLA1
EIF1AD
BANF1
NOP16
HIGD2A
MTUS1
CORO7
DNAJC30
BUD23
METTL1
EEF1AKMT3
DDX46
CYP27B1
DPP3
HDAC6
CBX7
SAP30
BAHCC1
ATP6V1C1
RNPEPL1
STYXL1
PRKCA
BMS1
NEXN
LSG1
UBE2E2
BAG6
APOM
SFXN1
RRAGC
UPK3B
KDM4C
RARA
GRIN2D
FASN
NDUFS7
MAZ
PLEC
NR5A2
NAPA
SMG8
NVL
SPTAN1