ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX059714 | VCaP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◣ SRX059714: VCaP

◢ HDAC3: STRING

PRICKLE1
RAE1
PMF1-BGLAP
PMF1
NBPF6
ARID3B
SCGB3A1
APP
KDR
SLC45A4
ZBTB7B
PMM1
DNPEP
ETV4
TM2D2
ADAM9
CALML5
DUX4
PIK3AP1
TENT2
PROP1
LECT2
PEX10
LGALS8
NUDT3
NBPF4
TMEM216
FRMPD1
LAMA3
APBB2
SLC22A10
ACMSD
GALNT18
NGB
GRM3
CXCL8
SBSPON
CDK14
TMEM40
JPH4
NPR2
TIPARP
RUVBL1
EEFSEC
C6orf58
TRIM52
PPARGC1A
ANGPT1
STEAP4
SGK3
HIGD1C
ARSG
BCL2L13
LDB3
MRGPRD
IFRD1
BEST3
SMYD1
HDGF
NWD1
IRX4
HIF3A
UGT2B10
MAX
TRPT1
NUDT22
DNAJC4
ULK4
TCAF2
MAMDC2
ERN1
CDCA7L
DAAM1
SCUBE3
KRT4
PCDH7
RFPL3
PDE9A
SKIDA1
UNC45B
ATOH8
SRSF10
SASH1
HAPLN2
GLYATL1
ZNF610
ANP32E
SUPT7L
SLC4A1AP
MX1
JPH3
STC1
LEFTY1
RAB37
TNK2
PPP1R15B
EYA3
EXPH5
NFIC
SCIMP
MTRNR2L1
ERCC1
MTCL1
RRBP1
SMIM34A
ADRA2C
ATP6V1G1
SLC16A8
TUBA3D
DHX36
DUSP6
VSTM5
UNC13A
MKLN1
ZBTB18
PRRT1
PPT2
ISX
ANKRD40CL
TMEM204
DDX19B
AARS1
ATXN2L
DIDO1
WDPCP
LGALS7B
TGFB3
IFT43
SULT1C3
TIMP2
FAM234B
TMEM100
CLDN8
FKBPL
ATF6B
MSX1
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
POLR2J3
WDR74
KCNQ3
NOVA2
ARHGAP22
PIGZ
NPTX2
KLK3
DPP9
UGT2B28
ARHGEF38
GABRA2
MBOAT2
TLK1
KRT3
ZNF771
DUS1L
TMCC2
TRMT12
MUSK
MAT2A
CYP3A43
RGL3
IRGM
TEPSIN
NDUFAF8
BDNF
ADAMTS8
TMEM237
SLC29A2
EIF4EBP1
RPH3AL
IGFBP1
ZCCHC14
HDGFL2
MMP17
ANK3
MTRNR2L2
MSH3
DHFR
MAPKAPK3
PALLD
OR13G1
BIRC5
TUBA3E
TRIM49D2
TRIM49D1
MKS1
SEC13
SH2D6
ZNF559-ZNF177
ZNF559
PDGFA
CHCHD5
DAB1
IL20RA
SLC30A4
ITPRID1
TFCP2L1
DLX1
LSM11
UGT2B11
PHGR1
SEPTIN9
IFNLR1
ALDH3B2
LOC114841035
FKBP2
VEGFB
HES6
ZNF331
KCTD7
CBY3
EFCAB12
MTMR9
TSPAN3
TPT1
PRDM1
LBHD2
SYK
GAPDHS
CLIC6
TAOK3
CDC7
DECR1
MACROD1
SMIM13
PFKFB3
CDKN2AIP
PHF19
SAXO2
EFL1
MTRNR2L8
FAM222B
LAPTM4B
PRRC2B
FBXL20
SLC2A5
STK32A
FNDC10
TASOR
SIN3B
NEBL
ATXN7L2
KSR1
VAT1
RND2
ANPEP
NFIX
MILR1
CMTR2
TPD52
SLAIN1
SENP1
PFKM
CDRT4
NFIB
STAU2
CREB3L1
WIZ
SCAMP2
DLG2
NUDT9
POLR3GL
LIX1L
ANKRD34A
ZNF341
LOC100130520
CD300H
CDKN1A
ZNF516
SNX16
CD93
TUT1
WASHC3
EDN3
C3orf14
TTLL12
CPLX1
NSMAF
C4orf51
HIVEP1
PHACTR4
TTC7A
PRR15L
MCFD2
PYCR2
SMYD3
PAX6
C1orf116
SCIN
INPP5K
CCN5
USP44
TRAF3IP2
NME4
DECR2
USP30
PRKAG2
ZNF287
WRNIP1
LMOD3
AGPS
TMPRSS11F
KIAA1522
SHF
SAMD12
PRELID2
C3orf20
ESRP2
HUS1
TRIQK
NIBAN2
RNF186
UNC80
SHLD2
GLUD1
TMEM266
BRD2
LDLRAD4
MYH10
SRRM4
SPIDR
HSPA4
PEBP1
MOCS1
PLIN1
GSTP1
C1orf198
ETV5
TLE1
DBP
MOGAT2
SOCS2
CYRIB
REG1A
ZNF547
TRAPPC2B
MTNR1A
TBC1D14
PRMT8
INIP
PER1
UTRN
HSD17B6
RAB4A
COPRS
RGPD2
RGPD1
EFNA1
SLC50A1
HSPA12A
ENO4
MNS1
HOXC6
HOXC5
DSCAML1
RAB36
LRRC30
CDK3
SRP9
GSPT1
THRSP
TAS2R42
NR2F2
ANXA1
ADGRG7
EDARADD
PSCA
BLNK
AUTS2
SNAI1
ZNF614
GPR153
B4GALNT3
POLR2J2
ABHD2
VPS37C
G3BP2
CYP4F8
BCL6
BBS1
RERE
ANKRD28
SPATA6L
PLPP6
RUNDC1
PTGES3L-AARSD1
PTGES3L
PIH1D2
NKAPD1
CYREN
ATL3
ECE1
ARHGEF7
THAP4
PAH
RPL22L1
RTN1
CD177
TRIM68
STX16
FAM107A
FZD1
HERC3
RASSF8
DCLK1
MSMB
GLI2
RASAL2
PDE4D
KCNS3
SPTBN1
RAB11FIP1
NR1I2
KLF15
TXNRD1
CAMK1
GRHL2
KCNH2
XKR9
LACTB2
FRG2
NFKBIA
RHOH
REP15
CEBPD
TRMT61A
CKB
DRG2
NFKBIL1
DDX39B
ATP6V1G2
HDAC4
CYTH1
SIRT4
FAM214A
KCNIP1
NME1-NME2
NME1
CFAP74
FAM174B
SBF2
DHRS13
ZG16B
TMEM217
TBC1D22B
BCAR3
FANK1
FAM110B
COL23A1
MAD2L1BP
GTPBP2
CST2
TMEM87A
GANC
SLC2A9
CCDC86
NAPA
DNAH5
CAMKK2
GREB1
ST6GALNAC4
SYVN1
FAAH
TJP2
OR1L1
FAM107B
LOC105370980
DPYSL3
LRRC25
KRTAP9-6
INPP5A
PMVK
H4C2
H3C2
STRN
MAP3K6
EPB41L4B
CDHR3
BRD3
CCL14
C9orf152
FBXL5
SUGCT
MPLKIP
TRIM33
PANK1
HOXA3
EVL
LNX1
GMNN
FOXQ1
MRPL21
IGHMBP2
HERC5
SELENOS
KRT28
EPHB3
RAD52
MMAA
SNAP91
SMOX
KRT35
CHMP4C
SLC13A1
RGS3
CORO2A
TMEM210
LRRC26
TAFA4
AK4
CPT1A
GSG1
TBC1D9B
SCUBE2
LFNG
NBR1
FBRSL1
IL15RA
LPCAT3
SREBF1
TNFSF15
H4C3
H1-6
MMP20
OTOL1
ODC1
HS3ST4
TMEM68
TGS1
ADAMTS3
ST3GAL6
FOXN4
NUDT16
MMP15
DIO1
TBPL1
MTHFS
ITLN1
ARHGAP40
MED30
RP1
DNASE2B
RIN2
C11orf24
ZNF200
B3GNT6
SLC6A11
GOLPH3
PRXL2A
ITPR3
GPRIN2
OSBPL6
MPHOSPH10
MCEE
SLN
VPS13B
ATL1
VPS26B
NCAPD3
MAP4K5
VEGFC
WDR55
SLCO1A2
CGN
ZCRB1
PPHLN1
SMAD4
IMPA1
RAB11A
UCK2
AKNA
ZNF579
SRGAP3
PACSIN1
AMHR2
B3GAT1
SKIL
UBB
PGBD3
HEXIM1
TMTC2
DPY19L4
ANO6
RPS27
RAB13
CCND3
TAF8
GPR37
RNF115
POLR3C
UNC5A
MLLT11
CDC42SE1
TCHHL1
RRP1
SEMA6D
PDZK1
MB
ACER2
IWS1
IKZF3
MYEOV
HEXA
PHF23
ALDH18A1
GRB7
PDXK
LAMP1
HNRNPA2B1
CBX3
GET4
SLC39A10
EPC2
WDTC1
AP5Z1
DDX17
EIF4G2
STRBP
SLC25A25
NAIF1
GABARAP
SEPTIN7
TMEM199
POLDIP2
WASHC2A
KAT5
TES
WASF2
MRPL45
WASHC2C
ERAL1
UBE2Q1
SPATA25
NEURL2
CTSA
GPR137
BAD
MARCHF9
CDK4
HAGH
FAHD1
SFSWAP
SERPIND1
GSK3B
ATP6V0D1
AGRP
NAGPA
UVRAG
RSF1
AAMDC
CD300LF
SPNS1
MSMO1
CRBN
RPGRIP1L
FTO
UBE3B
DAGLA
TRMO
RBBP8NL
RBM48
PEX1
MTBP
MRPL13
RALGDS
FRG2C
PSMD3
MDM2
SUMF1
BCL3
SLC35B1
EFNA3
SYNGAP1
CUTA
MTHFR
IL1R1
ZZZ3
CLCN7
HES1
SMARCD2
USP49
TOMM22
C1orf174
DDX42
CCDC47
SRSF1
RPUSD4
FAM118B
C8orf33
GBA
ILF3
STARD3
TRIB1
ISY1-RAB43
ISY1
POLR3F
DZANK1
SERPINI1
PDCD10
COMMD9
RBBP5
ASB2
CLCN6
ABCC10
MAN1B1
RAPGEF3
LZTR1
STAT6
TSR3
GNPTG
MACC1
THAP7
ANGPTL4
VPS50
HEPACAM2
ATF3
UNC13D
CD55
GADD45A
RHOBTB2
VPS33A
BHLHE40
APOBEC3B
PTPRF
FAM72C
IRF2BP2
SRGAP2B
FAM72D
SQSTM1
MIEN1
OSGEP
APEX1
ZNF335
SLC35A5
ATG3
PGAP3
ERBB2
RARB
TBL1X
TMC7
TRMT2A
RANBP1
CCDC59
PGLYRP4
MCOLN1
FANCA
PSMB7
POLR2J
CLPTM1
AURKAIP1
SUPV3L1
SUPT6H
SDF2
GSR
TET3
SNRPE
TFPT
PRPF31
CARD16
IDH3B
RPS26
RAD9A
TRA2B
PDGFB
RDH5
ITGA7
BLOC1S1
SPINK1
SMN2
SMN1
ERICH4
DMAC2
YJU2
NUP214
SRGAP2
FAM72A
TBRG4
WASHC5
NSMCE2
MOCS3
DPM1
VIRMA
GET3
ZNF408
ARHGAP1
ELFN2
C5orf51
SALL4
XPO7
UPP1
KMT2E
CLN3
APOBR
TRAF4
MRTO4
EMC1
HPS5
GTF2H1
INO80C
SRI
PDAP1
BUD31
SLC25A53
TSFM
TOP3A
SMCR8
TMEM205
RAB3D
CCDC159
ANXA2
YAP1
CYP2A13
CDKAL1
GLTP
SLC25A45
FRMD8
IRF2BPL
ENTPD4
MYCL
MFSD1
PPP6R1
ZNF165
SAP30BP
RECQL5
CASC3
ATP5MF-PTCD1
ATP5MF
DOK7
SLC4A2
CDK5
SLIRP
ALKBH1
DVL2
PAXBP1
TRMT1
NACC1
C16orf91
ZSCAN22
PCIF1
RARG
TXN2
MMP13
U2SURP
CEP162
ZNF383
UBE3C
ZDHHC6
VTI1A
AMDHD2
ST7
EIF2D
CDK12
ARHGAP32
FLOT2
TAS1R1
NOL9
WWOX
CELA3B
SLC25A11
RNF167
AXL
ZSCAN25
CCDC88B
BIRC2
ATAD2
PMS1
ORMDL1
MTRNR2L9
ZBTB7C
ZBTB45
SMG7
GATB
MEF2C
GFM1
DIP2A
SPAG16
ITFG2
MEMO1
IER3
FLOT1
MRPS15
FAM83A
PTBP1
GTPBP6
KRR1
SUSD4
SUMO3
UBE2B
CDKL3
PIP4P1
RTF2
CLSTN1
DDX41
DNAJC11
JMJD7-PLA2G4B
JMJD7
NUP107
ZNF668
VAC14
SEPTIN5
GP1BB
INTS10
KAT8
SH3GL1
CHAF1A
NDUFA2
IK
KLF10
WBP2
E2F6
ZMYND8
LIMA1
NDUFA4
SPRED2
PHAX
ZNF576
IRGQ
TRIP4
CCNT1
ARID2
LANCL2
ECH1
ANKS6
LRRC47
UBAP2L
C1orf43
SEMA3B
SSBP1
ADGRB3
MOB1B
CCDC97
THOP1
SGTA
MIER1
ATG9B
ABCB8
DAZAP1
ARID5B
RAD51AP1
C12orf4
RRP15
PSME3
UBE2I
HNRNPH2
TNC
KANSL3
FER1L5
SLK
SRGAP2C
KCNMA1
FAM72B
FGGY
FSCN1
ACVR1B
STX1A
SUMO2
NGDN
BANP
TPP1
ALG6
THEMIS2
HM13
SCAMP5
BSG
PPWD1
CENPK
UBQLN1
KDM7A
WDR62
THAP8
OTUD7A
TRIM16L
SSH1
THRAP3
VGLL4
XRCC5
SLC33A1
CMIP
BIRC3
ADAM23
NAPB
EPS8
C19orf33
SPATC1L
RPTOR
STX6
TBC1D30
GPATCH3
GNS
SMARCA4
MRPS7
GGA3
BAIAP2
RAB3IP
ATG14
LARP1
ZNF2