ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457146 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◣ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

PDXK
ALDH18A1
WDTC1
SLC39A10
DDX17
STRBP
EIF4G2
SLC25A25
NAIF1
EPC2
HNRNPA2B1
CBX3
WASF2
SEPTIN7
PHF23
GABARAP
NUDT3
GSK3B
GPR137
BAD
RSF1
AAMDC
RPGRIP1L
FTO
ARID3B
MSMO1
USP49
DDX42
CCDC47
SRSF1
MAN1B1
SERPINI1
PDCD10
RHOBTB2
MDM2
DAGLA
FAM72C
SRGAP2B
FAM72D
PGLYRP4
SMARCD2
SERPIND1
SEPTIN5
GP1BB
FANCA
SRGAP2
FAM72A
XPO7
WBP2
PMS1
ORMDL1
PTPRF
MEMO1
MTRNR2L1
MOB1B
AURKAIP1
SRGAP2C
FAM72B
WWOX
INO80C
MAN2A2
WNK1
NFU1
PPP6R1
CAPRIN2
DRC7
PHF19
INTS10
TMEM59
PRAME
TRIM67
SLC6A9
TMEM72
MACC1
DICER1
BACH2
DENR
SMCO1
E2F6
RTN4
AIFM1
YJU2
ADGRL1
PRKAB1
CDK12
ERMN
MGAT5
CSTF2
EPB41
KANSL3
FER1L5
RFX1
DUX4
TBL1X
CFAP36
PSMD5
KIAA1586
CMIP
TJP3
MARCHF2
TRUB2
COQ4
SLC45A3
CLUL1
PI16
HDAC6
SLC4A1
ZNF77
CEP43
TRIM37
ARMC8
CTBS
ZNF347
NCAPD2
MRPL51
NFE2
ZNF451
RNF223
NEXN
PCIF1
SYT7
KMT2E
BCL3
VIM
XRCC5
CRYAA2
CRYAA
FRG2C
KDSR
ZBTB7B
ABCB10
SSH1
TRIM63
NR4A1
MAP3K1
UBE2F
NXT2
SCN9A
TNPO3
PAXBP1
SPINK4
THEMIS2
GYPE
MFSD12
TMEM120A
VWA7
IL1R1
CENPF
GLIPR1L1
CAPS2
GTF3C2
BIRC2
CASS4
STK11
KDM3A
HSF5
ZNF497
LAPTM4B
VILL
PLSCR1
TANGO2
SNAI3
PRDM11
LZTR1
ARID1A
ATAD2
ALAS2
CCDC88B
BTNL10
ANKRD33
CASC3
EML2
GBA
PTEN
KLLN
ZNF408
ARHGAP1
GTPBP6
ADAMTSL4
ZNF609
TCP11L2
PTCD3
POLR1A
TNFAIP8
TSPAN32
C11orf21
CHCHD2
TMEM18
FKBP8
PPM1F
P2RX6
SLC43A3
MFAP3L
NUP214
PDK1
GYPB
HPN
NR4A3
THAP6
CD300LF
RPS11
GUCA1B
TPM4
H4C4
H2BC6
ETFB
PYCR2
CRKL
MAD1L1
ZNF165
TM7SF3
MED21
TSC1
GFI1B
WDR89
EIF2AK1
H4C8
NARF
GNB2
MBD2
NDUFS7
DNAJB2
SLC26A8
MAPK14
TNFAIP3
ILF2
SLFN14
PSIP1
DIP2A
DNAJB12
PPIL2
FBXW11
TMOD1
BAG6
APOM
PRDX1
FUT10
PPP1R14D
RNF217
GOLGA8B
ARID2
ALOX12
USP11
AP1G1
HMOX1
NRCAM
CLK3
H1-0
GCAT
SIRT1
PLSCR2
C3orf86
METTL1
EEF1AKMT3
CYP27B1
TUBGCP5
KLHL20
FOXN1
KRT8
SAMD4A
GTF2H4
BCL6
KRBA1
ASCC1
ANAPC16
CHSY1
SDE2
SLC35E2A
FAM83A
PIK3R3
RINL
PDE4C
ZDHHC6
VTI1A
CXCL6
NOS3
UFD1
CDC45
PXT1
KCTD20
HDAC11
RTBDN
MAST1
RBPJ
CCNI
ST6GAL1
MFSD2B
NOP16
HIGD2A
BCL7B
PRPF38A
ORC1
THAP7
UROD
HECTD3
POLR2J3
BTG2
YIF1B
KCNK6
SUPV3L1
EIF4A2
CCP110
TMEM191C
FKBPL
ATF6B
HTR4
UCP3
SPIDR
FZD1
WASHC2C
SNRPE
BRWD1
MSANTD1
NPHS1
KIRREL2
UBE3B
CORO1C
NBEAL2
ATP2C1
BSG
ERCC6L2
SS18L2
SEC22C
BNIP3L
TUBB4B
TIMM10B
ARFIP2
ERMAP
TAF10
DYNC2I1
ANKFY1
CNKSR3
IRF2BP2
CLPTM1
PPOX
ST6GALNAC1
LYL1
BRPF1
NDUFS3
KBTBD4
ASIC4
ADAMTS14
SOCS2
PPP1R15A
PLEKHA4
LSM2
FABP6
ZNF510
FAM110A
RAB33B
TNFRSF1A
ID2
CACTIN
IL1RL1
TOM1L2
DRC3
TRAPPC9
TUBE1
FAM229B
IL13
BAIAP2
TMEM107
UBE2L3
PIH1D2
NKAPD1
C5AR1
SPATA24
SLC25A11
RNF167
ALG14
SEC31A
RIPOR3
THAP9
ZNF74
QRICH1
CSTF2T
GP6
CCM2
WWP1
PRKCI
PITHD1
REXO4
ADAMTS13
H4C15
H4C14
RBBP5
UBE2B
CDKL3
SH2B1
VPS52
RPS18
UBC
HEMGN
B3GALT4
HEPH
TXN2
SLC2A1
DDIT4
TFR2
TTC12
SF3A3
JMJD1C
SLC35A4
APBB3
GUK1
RSAD2
RTN3
GJC2
CCDC97
RPA2
VPS13B
PSPN
ALKBH7
TMEM69
GPBP1L1
FOXJ1
ITGB3BP
EFCAB7
RPP25
KLHL18
KIF9
PCNT
C21orf58
NOL8
CENPP
INKA2
DDX20
WDR83OS
WDR83
MAN2B1
OBSL1
INHA
RNFT1
GABPB2
C10orf71
ADAR
POLM
SQSTM1
LPCAT3
UTP18
MBTD1
STBD1
SLC25A17
MAP1LC3B2
RGS20
HEXIM2
DDC
ATF7-NPFF
ATF7
EGFL7
ZMIZ1
PAK1IP1
C6orf52
MARCHF7
KRTAP10-6
DGCR8
MST1
FAM53C
CDC25C
NPL
RAB42
EZH1
CA1
USP3
CTPS1
HMBS
POLA1
IREB2
EIF1AD
BANF1
TTC26
MEST
PRR5
MED15
STAT6
HAPLN2
VAT1
RND2
TXNIP
PDE7A
PTPN12
RRN3
C1orf159
TIPRL
BTBD10
IQCH
AAGAB
GOLGA3
ATF3
CCRL2
SEC22B
PLK3
RNF168
RPS26
ZMYND8
SLC33A1
COQ10B
RCSD1
PSMD10
ATG4A
TBX18
NEU1
TRIM69
PARK7
TCFL5
STX1A
SPATC1L
NLGN3
BAZ1B
ISY1-RAB43
ISY1
SMG7
KCNH2
CDC5L
PLAAT2
HOXB9
FAM210B
KCNJ11
MTBP
MRPL13
AGPAT1
SUPT7L
SLC4A1AP
TRMT2A
RANBP1
C9orf16
MRPL54
APBA3
ATP8B2
AQP10
CYB561D1
C2orf50
ECH1
BAHCC1
H4C3
H1-6
TSC22D4
NYAP1
PPP1R12A
PPARD
NME1-NME2
NME1
GDAP1
PRRC2A
AIF1
FRG2
USP6NL
CRB1
PISD
ACSF3
ZNF467
CALM2
ABCF1
HERC1
TRIB1
PSME3
VMAC
NDUFA11
TOP3B
LMAN2
TPR
ODR4
DIPK1A
ATAD3A
MYBPHL
SLC25A42
POLD4
RPL11
CCDC59
GTF2B
CFAP20
ERVH48-1
CCNG2
RAB33A
ULK4
MRPL40
HIRA
TRMT10A
MTTP
DAGLB
KSR1
ETFRF1
CFAP94
TRAPPC4
RPS25
SH3BGR
LCA5L
DPEP3
GAS8
DBNDD1
ICAM2
NDUFAF1
TMCO6
C2orf88
LRRIQ3
FPGT-TNNI3K
FPGT
CD2
YARS1
S100PBP
S100Z
ZC3HC1
TMC8
TMC6
RHOT1
DDX41
DSTYK
TMEM87B
EPS15
ZCCHC14
DNAJC9
MTHFR
ATG101
FDXACB1
C11orf1
ARF3
BSDC1
PIGQ
NHLRC4
TMEM114
ZNF576
IRGQ
MRPL27
EME1
HUS1B
RRP15
KLF3
RGL2
RUNX1T1
YARS2
TMEM9
UTP3
JOSD2
ASPDH
RBMX
E2F1
TMCC2
PPP4R3B
PRPSAP1
TUBB
MDC1
MAD2L1BP
GTPBP2
C1orf226
IQUB
TMEM183A
EVA1B
MYL12A
MAPKAPK3
MRPL48
CISH
H2AZ2
AP1M1
HYLS1
DHDH
ZBTB45
TEX46
KDM1A
RCOR3
ZNF474
CEP85L
NR1H3
ACP2
NUP210L
SSBP1
DGCR2
NCOA4
ATF4
PDAP1
BUD31
COMT
PAFAH2
SSBP2
MAMSTR
PPM1D
IFT172
IL19
IL10
ST7
CTR9
H4C11
DHH
SCMH1
SELPLG
TRIM6-TRIM34
TRIM6
YPEL4
ZNF813
TLE2
TAS1R1
NOL9
TNFRSF1B
TRIB3
ETFA
ZNF335
USP9X
TUBB1
HDC
WDR74
TCTEX1D4
BTBD19
GSE1
TEAD2
DKKL1
LARS2
THEM4
CYP26A1
ISG20
CCDC116
TRMO
LRRC23
NDUFB3
FAM126B
SELENOH
AQP1
NOCT
RIMBP3C
RIMBP3B
C19orf25
MAGT1
COX7B
PLS1
CYTH2
VPS9D1
RALGDS
HUS1
TMBIM1
MICOS10-NBL1
MICOS10
USP32
SPRED2
PRORP
PPP2R3C
BRD7
PDCD2L
CDKN1A
SMG5
TMEM79
MGRN1
C5orf51
HNRNPH2
DUSP1
CCDC7
KIF2C
IARS2
BPNT1
LIPC
RAP1A
DLAT
CITED4
GYPA
CYP51A1
TNFAIP8L1
TFRC
ZSCAN25
TMEM167B
NUP205
ZSCAN31
KCNAB2
PFDN4
KPTN
HNRNPH1
USP54
FUS
PCGF5
PPP2R5A
FBLN2
RIMBP3
AP3S2
IMPA1
MTHFD1L
NRL
DCAF11
PUS7L
IRAK4
GCLC
RABEP2
PHF12
PRR19
PAFAH1B3
C6orf226
DAB2
TRIM5
TRIM22
CTDSPL2
SLC46A3
RMND5B
PSRC1
MTOR
STX6
NCAPG
ATG16L2
SLC45A4
NEK2
COL14A1
ARCN1
MYADM
L3MBTL3
SPTBN4
SDF2L1
FAM156B
FAM156A
BLVRB
STMP1
MLX
COASY
CLTCL1
AGBL3
WDR5
SPRING1
RNFT2
STARD10
GTF2IRD2
CAT
FAM200B
TMEM222
PRKAR1B
RFC5
FAM83F
CCNT1
HPCAL1
SPDEF
CDIPT
STK40
SAMD8
HLTF
GCNT1
C16orf46
RPS14
DOHH
MDM4
TMEM43
CHCHD4
DPY19L4
PLA2G6
TIMM10
KDM5C
RFX5
HCFC2
GLT8D2
PTGES2
PPIH
ZBTB40
SRFBP1
STXBP4
COX11
LRRC61
OTUD3
KIF23
GRAP2
KAT5
TRIP4
TBC1D30
GNS
TRIM28
ZNF524
FIZ1
NNMT
UGCG
NSUN4
VAMP5
ZCCHC24
TMEM191B
PNISR
KRT18
DNAJC28
GPR84
SNX24
GPX1
MTIF2
NUP155
ACSL1
PPIL4
MAPK1
DUSP18
CENPN
BMS1
ZMPSTE24
SLC38A8
SKIV2L
NELFE
FBXO46
TES
MRPS15
ELOVL6
PDXDC1
TMEM205
RAB3D
CCDC159
RAD21
SLC25A37
IKBKG
G6PD
H3C13
H2BC18
TSC22D2
OR52A1
CELA3B
PTMS
GAL3ST4
TMPPE
GLB1
CDH23
SFSWAP
SHB
LSR
ANO10
ABHD5
GALK2
COPS2
EIF2D
C8orf58
CCAR2
RBM28
MAP3K8
AHCTF1
ZBTB21
CXCR5
GPR37L1
KDM7A
COMMD4
COPS4
LONP1
CATSPERD
HEMK1
C3orf18
ZBTB8OS
RBBP4
ZKSCAN2
ILKAP
GTPBP3
APRT
ANO8
AGPAT3
YTHDF2
SETD1A
FLVCR1
DCLRE1B
AP4B1
BCAS3
LENG9
MAP1LC3B
FBXO31
FAM104B
ESYT1
UBE2I
ATP6V1F
ASXL1
EOLA2
MELTF
INTS6L
ATP13A3
NUDCD3
AHI1
OCIAD1
H4C12
UNKL
BMF
TUT1
MRPL44
DNAJB6
CYP21A2
RAC2
HEXA
TRMT1
NACC1
LARP1
C19orf48
DGCR6L
NFKBIL1
DDX39B
ATP6V1G2
BCKDK
ETFDH
C4orf46
GPN3
FAM216A
NUMBL
NRSN2
TFPT
PRPF31
GSDMD
PIGM
GAGE2C
GAGE2B
GAGE2A
TTC39A
TARDBP
ERCC1
ZCWPW1
MEPCE
ERGIC2
S100A13
CHTOP
DDX18
SLC6A19
IL21R
RIOK1
CAGE1
SIRT3