ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930141 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◣ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

ARID3B
WASHC2A
HEXA
PDGFB
ERCC1
LAMP1
AP5Z1
KCNMA1
SPATA25
NEURL2
CTSA
TNC
WASHC2C
TNNC2
SNX21
STRA6
ARID5B
MACC1
MEOX1
IGLL5
GET4
SLC1A7
SUMF1
KAT5
ZNF668
CLCN7
ANGPTL4
CORO7
COMMD9
FRG2C
MTRNR2L1
WBP1L
CELA3B
TGIF1
MYEOV
SYNPO
CLN3
APOBR
TMCC3
C1QTNF1
RMND1
ARMT1
PYCR1
MSS51
ENTPD4
RRAGC
PVALEF
AATK
ARHGAP25
GADD45A
TRMO
SEMA3D
MTHFR
CLCN6
MTRNR2L2
MSH3
DHFR
SLC8A3
TCAF2
VSTM2L
BCL3
MYOG
TCF7L2
TMEM120B
FHL2
FRG2
VPS33A
AMDHD2
SEC22B
THEMIS2
USP2
NAGPA
ZNF507
LIMK1
APOC1
DOK7
TMEM91
SLC35A5
ATG3
HAGH
FAHD1
FSCN1
TMCC2
ETV4
PRKAG3
PCBP4
BAIAP2
UPP1
TMEM239
C20orf141
MTRNR2L8
SPNS1
SULF1
BAHCC1
TBL1X
SYNPO2L
SMAD7
EVPL
EZR
MEF2D
BAX
PRUNE2
HNRNPH2
NPAS4
ASF1B
ATF3
FGF6
IFNAR2
ACTC1
CRYGN
ATP6V0D1
AGRP
CLIP1
SYNJ2
CEP162
TBC1D1
UBE2Q1
TINAGL1
KLHL41
NUDT4B
TRIL
MYBPC2
LRRC47
DTNA
B3GALT5
KLHL30
MXRA7
MARCHF9
CDK4
ABCC3
PER1
SPAAR
HRCT1
TNNT1
CCN2
INO80C
NUDT14
CYB5R1
SH2D3C
TMEM167B
CHST12
SH3PXD2A
SPRY4
NFIB
ITPK1
FREM1
EPHA2
COL16A1
GPSM1
CD82
ACOT9
MYLK2
FOXB2
PLXNB2
NES
MCOLN1
ABLIM1
AFAP1
IZUMO2
INKA2
RDH5
ITGA7
BLOC1S1
TBC1D5
CDCA7L
CREB5
COL23A1
NR4A1
CYP27C1
NAA38
CHD3
UXS1
SOBP
NNMT
CNN3
PALLD
ITSN2
NR2E3
OPRD1
SOAT2
IGFBP6
BLCAP
NNAT
SLC12A3
HHIPL2
ABHD2
ADAMTS1
HES1
NGFR
RARA
MYOD1
MFSD1
DGLUCY
SPRED2
IQSEC1
HOXC13
TNRC6B
TGM2
LFNG
EXOC7
SERTAD2
RYR1
EYA1
HNRNPD
TRIM62
ARID5A
ATP13A5
RFTN1
HPS5
GTF2H1
VPS11
ETS1
TEX46
KDM1A
L1CAM
PALD1
SKP2
LMBRD2
MINDY2
ENTPD2
GUCA2A
HERC5
LBH
FAM110A
INTS12
GSTCD
RANGAP1
AMOTL2
SMARCD2
SMYD1
TRIM55
ZNF609
CCNI
POLR2M
KMT2E
SBK2
TXLNB
SCN3B
LMCD1
ID3
CITED2
YBX3
TNNI1
PDZRN3
ZAR1L
BRCA2
DUSP5
TBC1D9
MYCL
SPATC1L
ATP6V1C1
SNAI2
KAZN
TMEM40
MAST4
OSGEP
APEX1
SMAD3
LSMEM1
CDH11
WASHC5
NSMCE2
DUSP1
GRN
KDM3A
STBD1
NTSR1
PGS1
HMX3
TBC1D19
TNNT2
SETD5
EPHB2
COMMD4
UBE2H
CELA3A
DAPK1
ST3GAL5
HMCN2
ZBTB18
ALDOA
ST3GAL2
ARID1A
PPP1R3D
FAM217B
MNAT1
INTS10
KCNF1
MYBPH
DUSP6
FRMD4A
TP53AIP1
PRMT1
IL32
NCAM1
RIN2
SLC2A10
ITGB3BP
EFCAB7
UNKL
TJAP1
ADAM12
SLC4A2
CDK5
DYSF
TMEM205
RAB3D
CCDC159
ATP6V1H
TRAF4
SNRPB2
KDSR
CXXC5
ZNF32
DERL3
SYNGAP1
CUTA
MRPL44
MYH7
S100A2
TCEAL7
LACTBL1
DUX4
ATP6V1G1
ANKRD29
SSX2IP
LMF1
ABAT
GLIS2
GPER1
VGLL4
TCF4
NUTM2G
PIP4P1
WNT10A
FAM240C
MSMO1
SUPT7L
SLC4A1AP
LTBP1
SLC19A3
GLIPR1L1
CAPS2
GPX4
ABCC10
RAD9A
KANSL3
FER1L5
SLC6A9
FUT10
IL26
MYL4
USPL1
HMGB1
BCL9L
SSTR5
INMT
CFLAR
ARHGAP24
EPHA3
FGF8
KLHL12
PHLDB2
C2orf49
GXYLT2
VASH2
ISLR
CCDC33
RALGDS
TRIM16L
SPG21
TXNIP
MTF2
IFNLR1
PEX3
ADAT2
ARHGEF2
RGS3
RBM28
SPATS2L
GFRA1
LIMCH1
EFNA3
RERE
METTL7B
PTP4A3
GTF2B
SLN
SNAI1
PROSER1
NHLRC3
MARCHF8
PSMD3
KANSL1
MAPK10
SSBP1
CDRT4
NAV2
STYXL2
GPA33
C10orf67
ZNF292
TOGARAM2
PSEN2
SECTM1
RPUSD4
FAM118B
VPS50
HEPACAM2
NDUFA4
SIX1
SH3GLB2
C8orf58
MSC
ATP5IF1
SLC25A34
PELO
JUNB
ITGA1
CCNG2
SELENOH
ICE2
C2CD2
TPP1
TBC1D30
GNS
ELOVL6
PTPRD
COLEC12
MRPS23
CLDN5
SHB
FLNB
EFNA1
LAMA3
OSBPL7
ANKRD12
TTC12
RPP40
RDH8
GLS
COL5A3
ARMCX5-GPRASP2
ARMCX5
LRP5
PLAU
MGP
SUGCT
MPLKIP
MUSTN1
ITIH4
NFIA
NUTM2F
LURAP1L
ILF3
CHMP2B
RCBTB1
MDM2
SEPTIN9
ZNF775
IRF2BPL
DES
RBPJ
CALM2
TACR3
HMGCS1
CRBN
RNASEK
C17orf49
CRACR2A
IPP
MTRF1L
HES6
IRF9
MC2R
PPP6R1
E2F6
TCAP
PNMT
BMF
FOSB
RAI14
ECH1
DDX20
LTBP4
SYTL3
SLC22A8
ALLC
LOXL4
PAFAH2
PTGIS
TBPL1
NAGLU
RHOF
BORCS7
STMN1
IRF7
PMEPA1
RASGRP3
SH3BP4
PLEKHD1
TBKBP1
ZBTB40
MYLK4
BIN1
RASSF4
GKN1
THOC1
OCLN
ACHE
BHLHE40
NOXO1
GFER
VGLL3
AZIN1
CDC42EP3
FAM120B
DLL1
TSR3
GNPTG
C5orf51
SSBP2
GAA
PTK6
COMMD2
COPS4
CGGBP1
C3orf38
AMPD3
CLMN
CLTCL1
SRSF7
PDE4DIP
ATP8A1
UTP18
MBTD1
RBSN
ARFGEF2
ZP3
LOXL1
DGKB
WWOX
PSIP1
MAMSTR
CDK5RAP1
LSM12
G6PC3
TTC9
ELOVL3
WSCD1
PKM
UVRAG
ZNF217
ZNF92
RGS9BP
ANKRD27
MLXIPL
SMOC1
AASDH
NUP107
FZD1
BCAT1
CORO2A
ADNP
SYNE3
ZBTB7B
METTL9
HIF3A
ANKRD1
OTUD7B
LRP5L
CTHRC1
ACKR3
TSC1
GFI1B
TOR1AIP2
TOR1AIP1
LZTS2
BEST3
PELATON
PDLIM7
DRD2
CAPN2
RPS7
SREBF1
SHPK
CTNS
VTA1
NMBR
STING1
TSPAN33
MFAP4
ATP2A3
PHF23
DVL2
SH2B1
SLC24A1
INTS14
C20orf204
NFE2L2
CHRNA1
GTF2A1
MAP3K7CL
TMEM210
LRRC26
LPCAT1
KDM4C
APP
MTFR2
ARSG
GRAMD4
HRH1
TANK
KIAA0754
MIDEAS
RPL27
TTC26
USP15
RBMXL1
KYAT3
SYT7
HPCAL1
CSNK2A3
YARS1
S100PBP
HSPB7
TBX2
RTN2
CLCNKA
SAV1
RARB
MADD
HMOX1
SLC1A5
NACA
SYNRG
NDUFV2
RAD21
OLFML2A
RAB11B
AKR1B15
TRIM72
PYDC1
ELAC2
PFDN4
NBPF1
DPYD
PUM3
IRF2BP2
RPS12
NRAS
MCAM
SPATA9
RHOBTB3
ACVR1
KLF12
IGFBP5
DYRK1B
KYAT1
KDM6B
FSD2
WHAMM
USP30
BRF2
SVIL
EN2
SUN1
FBN3
DUSP10
WBP4
ELF1
ANKRD40
TNFRSF19
SLF2
COX16
UBC
RAB5B
UGGT1
NEBL
TEDDM1
FRMD3
MTBP
MRPL13
ST7
NUF2
WDR11
TMEM100
CHMP1B
LRRC75A
IL21R
MDFI
IMPACT
EIF5AL1
CPA1
COL9A2
NEXN
AAAS
ANKK1
BTG2
CCDC107
ENKUR
ALOX5AP
ZNF335
POMZP3
MRPS31
GSPT1
RBM25
HS1BP3
NOTCH2
ZBTB26
RAMP1
CAV3
ARL14EP
SPACA6
NDST1
THAP10
LRRC49
MCM6
DEPTOR
TSFM
MYL12A
TM9SF4
PRR5
DRG2
DNAJC25-GNG10
DNAJC25
LRRC17
ZNF654
SOX8
PRR5-ARHGAP8
MRPL34
DDA1
ABHD8
NME1-NME2
NME1
KAT6A
RTTN
IKBKG
G6PD
TMEM233
KIAA0895
ANLN
ZNF572
B4GALT2
ATP6V0B
CCDC88A
DPH2
SLC38A8
LOC389831
KDM8
CMTM2
SATB1
NAV1
TESPA1
ATP2A1
JMJD1C
GOSR2
MTERF1
COL20A1
HMGA2
B3GNT8
ZSCAN30
STAT3
NKIRAS1
RGMB
NR1D2
TEX36
TMEM190
KLK15
IL11
IER3
FLOT1
ARID2
ZCCHC4
PRKAG2
PPP1R15A
IFFO1
JAG1
NOP53
LMOD1
KLF7
HLF
DRD4
GPRC5A
MSL2
C1orf198
FAM107A
MYO18A
ASB18
TRPM4
HRC
SLC7A5
TMEM242
SNRPB
THAP5
DNAJB9
RHOQ
ATP6V1E2
ABR
STX16
MEMO1
MAST2
TEFM
TNFRSF1B
HDAC9
PBK
SYTL2
METTL15
KIF18A
RHOJ
CSRP3
GBA
SQSTM1
ARMC8
CCNO
NBL1
CDK6
PBX3
FAM185A
AIFM1
KLHL32
ELAPOR2
MYL5
ATP5ME
NDUFAF4
RIMS4
GBX2
TRIM47
PRRT1B
TOP3A
SMCR8
SETD3
CCNK
WBP1
INO80B
FGF16
AP3S2
MMADHC
VPS13B
NAPA
RPL5
ATR
TNFRSF12A
THOC6
HCFC1R1
CLDN6
WDR75
SH2D7
PLEKHM3
PLSCR1
CBLL1
FGD3
STON1-GTF2A1L
SF3A3
HSPB1
CDON
PIKFYVE
SEMA6A
RBL1
MPHOSPH10
MCEE
DCLRE1B
AP4B1
TMEM238
TBL1XR1
MTHFD2L
BBC3
CASZ1
RPN2
NBPF26
MYRFL
MROH8
METRNL
AXL
SLC33A1
BCL2L1
FIS1
MTNR1A
RRAD
PTF1A
CSK
CLDN15
CDKN1A
PNKD
ZCCHC3
PCNX4
EPM2A
RCAN1
ARHGEF6
PSMB7
PTK2
CPT1A
LAMTOR1
MTMR14
PPP5C
TERF1
SPATA13
RUSC2
INA
SCARB1
SYS1
CLK1
CCDC34
LRRC58
RFLNA
PGM5
BET1
COMMD8
DMAP1
NPEPL1
VMP1
PTRH2
TBC1D8
RUNX1
PRDX6
POLDIP3
SERINC2
DDX1
PCOTH
MIPEP
TRIOBP
TNFSF15
NSUN4
KCTD9
CDCA2
PLAAT5
PSME1
FITM1
POLR1F
H2AZ1
DNAJB14
COL12A1
RFC1
SLC9A3R2
TTI1
RPRD1B
TMBIM4
SLC25A32
DCAF13
LEFTY1
FMO1
ARL8B
THRAP3
FOS
CLK3
USP37
CNOT9
CUEDC1
SULF2
IRAK1BP1
KIAA1522
EIF2B3
BCKDK
HELB
NLK
MTREX
DHX29
AIG1
PLS1
MYL6
FLCN
CRNKL1
CFAP61
KLHDC10
SAMD11
MYL6B
RAB3IL1
GTF2H2C
WDR36
GTF2H2C_2
PTDSS2
HBS1L
TRIB3
SDHD
LRTM1
SGIP1
SLC1A4
RBM24
NRG1
ITGB2
BDKRB2
ANO9
ACSL3
OBSL1
INHA
CDK5RAP2
HIVEP2
SLC49A4
HSPBAP1
OSBPL9
MRPS5
CALD1
ID1
EML2
NEURL1
MFAP3L
FAM200B
GCK
SCT
CDHR5