ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976680 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◣ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L8
MYEOV
IKZF3
MTRNR2L2
MSH3
DHFR
GRB7
TES
ARID3B
TMEM199
POLDIP2
MTRNR2L1
CRBN
UBE3B
GRHL2
ERAL1
SFSWAP
TOMM22
MRPL45
RGPD2
RGPD1
PSMD3
STARD3
ISY1-RAB43
ISY1
CD300LF
RBM48
PEX1
POLR2J3
MTBP
MRPL13
GET3
SLC45A4
RBBP8NL
CD55
PGAP3
ERBB2
UNC13D
TXNRD1
SUPT6H
SDF2
SPAG16
TSR3
GNPTG
KAT8
LZTR1
STAT6
ESRP2
IL1R1
CARD16
TOP3A
SMCR8
SLIRP
ALKBH1
SEMA3B
POLR2J2
C1orf174
SALL4
HEXA
TET3
HES1
TSFM
SAP30BP
RECQL5
ATP5MF-PTCD1
ATP5MF
APOBEC3B
TRA2B
MOCS3
DPM1
CYP2A13
DUSP2
TRIB1
VPS50
HEPACAM2
ZNF335
TXN2
UBE2I
ERICH4
DMAC2
SRI
GSR
POLR2J
DNAJC11
RBBP5
RHOD
PDAP1
BUD31
GFM1
UVRAG
PSMD1
MRPS15
SOCS2
RTF2
MIEN1
SMN2
SMN1
RPS26
MRTO4
EMC1
CCDC97
NCBP2AS2
NCBP2
ERCC1
AXL
DDX23
UPK3B
ANGPTL4
TMEM205
RAB3D
CCDC159
GLTP
SPATA25
NEURL2
CTSA
MTRNR2L9
ATG9B
ABCB8
NAGPA
ZNF830
CCT6B
IDH3B
ECHDC1
LRRC47
TJP2
YAP1
SLC25A45
FRMD8
NKD2
C8orf33
C19orf33
MED6
RDH5
ITGA7
BLOC1S1
INO80D
PDCD6IP
GSN
SNRPE
MRPL10
LRRC46
LAMP1
TMC7
TBRG4
CDKAL1
ZZZ3
PALB2
DCTN5
NGDN
MAP3K7
EIF3H
JMJD7-PLA2G4B
JMJD7
SAMD10
PRPF6
SEPTIN9
PPWD1
CENPK
TMEM208
LRRC29
CENPBD1
TRMT2A
RANBP1
RPTOR
SLC35B1
STX16
SUPT7L
SLC4A1AP
DDX46
RPL23A
RAB34
SPNS1
WASHC5
NSMCE2
THAP7
BHLHE40
NDUFA2
IK
SUMF1
C16orf91
ZSCAN25
ZNF408
ARHGAP1
ELP3
SPINK1
TAS1R1
NOL9
ZBTB7C
POLR3F
DZANK1
C5orf51
MEAK7
PRKRIP1
LAMTOR1
ZNF165
PHAX
PSME3
FUT1
FGF21
ITFG2
ATG14
MAN2C1
SENP1
PFKM
ZNF383
ANXA2
ZFYVE26
RAD51B
REXO1
NDUFA9
AKAP3
CLPTM1
KRR1
LTO1
SLC25A53
RAE1
KMT5B
DIABLO
XAB2
PCP2
NDUFA4
UBQLN1
NEMF
NOM1
PEPD
MRPL58
NR1H2
HAGH
FAHD1
ZNF2
NVL
PSMG2
CEP76
RCE1
PFDN1
CASC3
VPS52
RPS18
TRMT1
NACC1
EPHB3
CCDC124
NOC2L
KLHL17
NOL10
IRF2BPL
METTL2A
LRFN4
ZNF576
IRGQ
ZCCHC4
ZCCHC10
KLF10
NOP16
HIGD2A
TRMO
U2SURP
NOL8
CENPP
ASB2
SUPV3L1
TRUB2
COQ4
GPRC5A
ZGPAT
ARFRP1
CDC6
SQSTM1
PSMB7
VIRMA
GATB
TRAF4
PRR3
GNL1
THUMPD1
ABCC10
RAPGEF3
GPATCH3
CBLL1
ELFN2
ZSCAN22
MMP13
STYXL1
SART3
ISCU
COLEC12
SENP5
DDX41
TPRN
TMEM203
NDOR1
RWDD1
KYNU
NXT2
CASP8
ZNF507
CAPN14
BRWD1
MB
PSG9
ZG16B
DNAJC30
BUD23
TIMM22
STON2
RALGDS
TFPT
PRPF31
BIRC3
TPST2
DOHH
TCTEX1D4
BTBD19
TATDN3
NSL1
FAM83A
EPYC
PRSS22
SLC39A4
CPSF1
LRATD2
BRPF1
EVPLL
SART1
ZDHHC6
VTI1A
DPP3
GTF2IRD2B
GABRR1
GPC1
TOMM6
TBC1D15
CLCN7
CCDC59
NUP214
VGLL4
TSN
HEMK1
C3orf18
RARB
TACC1
BCAS1
PTP4A1
KLF9
GTPBP4
NCAPH2
LMF2
SEC61B
ALG2
HS3ST6
VPS33A
CDK12
VAC14
EXOSC5
BCKDHA
MRPS7
GGA3
PLA2G2A
NOTCH3
OXNAD1
DPH3
HTRA2
DQX1
PCYT1A
COLEC11
LANCL2
NAPB
GCN1
KMT2A
LCN2
HUS1
CNPY2
PMPCB
SETD3
CCNK
H1-7
TBL1X
DOK7
EPS8
ZNF212
USHBP1
BABAM1
IL1RN
FGF19
STMN3
RTEL1
TBL3
SLPI
SURF2
SURF1
EIF2D
CCNT1
PTPRR
NHP2
PMEPA1
SEMA5B
WDR24
NDUFB5
MRPL47
SETD1B
RIN1
UPP1
RARG
MRPS11
MRPL46
WDR97
MAF1
RCOR3
TXNL4B
DHX38
PSMC3
FUBP3
TNPO3
EIF2S1
ATP6V1D
ABT1
TIMM50
CLDN4
TMEM258
FEN1
MED23
PIK3C2B
BIRC2
ZNF668
MRPL21
IGHMBP2
FASTKD2
ZNF646
SYBU
FLOT2
NFKBIA
INTS1
NSA2
GFM2
TAGLN2
ALKBH3
CBLC
CMIP
BMS1
ATF3
TMEM40
SLC2A4RG
LIME1
PNO1
TCERG1
NGB
SNIP1
DNALI1
CLDN24
CLDN22
AP5Z1
ZNF524
FIZ1
ATG101
ORAI3
KLK6
MRPL38
FAM222B
SMPD4
MZT2B
GADD45A
GOSR2
SMYD3
DDX19A
DNAJB12
P3H4
FKBP10
CCDC88B
NUP107
DGAT2
KMT5C
RASEF
KRT17
COMMD2
NOL11
UQCRQ
GDF9
UBE2M
CHMP2A
OST4
SKIL
API5
FOXS1
RNF207
DHRS3
BCAR1
SMG8
FOS
MAD2L1BP
STK19
DXO
NOP58
AMDHD2
PARG
SLC12A4
SNRNP200
NIBAN2
CDKN2AIPNL
COX16
CHRM3
KCNK15
TFAP2C
FANCD2
MAGOH
EXOC3L1
E2F4
ARID2
THOC1
ZXDC
YJU2
RAD51AP1
C12orf4
BANP
SF3B3
COG4
C7orf65
LOC102723996
ICOSLG
TH
SCAF11
TMEM41A
ICE1
VPS11
CACTIN
FAM187A
EFTUD2
CCDC103
TEKT2
ADPRS
SMG7
OAZ3
MRPL9
IGFL1
LEKR1
SLC30A6
RABGEF1
PLD1
WDR53
FBXO45
RPL26L1
ROBO1
DNAH5
PES1
SH3PXD2A
PIM3
SRP19
TRIM16L
ID1
SLC39A9
ERH
CD63
PPIL4
RICTOR
MDM4
PDRG1
SLC7A6OS
PRMT7
EPPK1
ZBTB7B
ELF3
SUGCT
MPLKIP
FBXW2
DDX49
COPE
FEM1A
METTL2B
RBPJ
TP53I3
RBSN
SMIM12
PUS10
PEX13
SEC13
TNRC18
DIDO1
LOC100129484
GID8
CDK11A
ECH1
SRD5A1
ATP6V1G1
DUS2
DDX28
TIMM23
MRPL3
POC1B-GALNT4
GALNT4
PLEKHG6
MYLIP
AGTPBP1
SSNA1
ANAPC2
MTIF2
CDC42EP4
SGMS2
PIKFYVE
CZIB
HOXA3
PLEC
BCL9L
SRP68
GALR2
LENG8
ADAM8
DUSP6
EIF1AD
BANF1
GAR1
DHRS13
MRPL53
RAI1
FSCN1
ATP6V1H
FADD
RBM25
MORF4L1
MRPL1
EIF2B2
SSTR5
GDPD4
NUDT5
CDC123
BAG6
APOM
RUSF1
RNPS1
PHF23
ALDH18A1
PDXK
HNRNPA2B1
CBX3
GET4
SLC39A10
EPC2
WDTC1
DDX17
EIF4G2
NUDT3
STRBP
SLC25A25
NAIF1
GABARAP
SEPTIN7
WASHC2A
KAT5
WASF2
WASHC2C
UBE2Q1
DUX4
GPR137
BAD
MARCHF9
CDK4
SERPIND1
GSK3B
ATP6V0D1
AGRP
RSF1
AAMDC
MSMO1
RPGRIP1L
FTO
DAGLA
FRG2C
MDM2
BCL3
EFNA3
SYNGAP1
CUTA
MTHFR
SMARCD2
FRG2
USP49
DDX42
CCDC47
SRSF1
RPUSD4
FAM118B
GBA
ILF3
SERPINI1
PDCD10
COMMD9
CLCN6
MAN1B1
MACC1
RHOBTB2
PTPRF
FAM72C
IRF2BP2
SRGAP2B
FAM72D
OSGEP
APEX1
SLC35A5
ATG3
PGLYRP4
MCOLN1
FANCA
AURKAIP1
RAD9A
PDGFB
SRGAP2
FAM72A
LGALS8
RGS3
XPO7
KMT2E
CLN3
APOBR
HPS5
GTF2H1
INO80C
PRICKLE1
ENTPD4
MYCL
MFSD1
PPP6R1
LAMA3
NME1-NME2
NME1
SLC4A2
CDK5
DVL2
PAXBP1
SHLD2
GLUD1
PCIF1
CEP162
UBE3C
ST7
ARHGAP32
WWOX
CELA3B
SLC25A11
RNF167
ATAD2
PMS1
ORMDL1
ZBTB45
STAU2
MEF2C
DIP2A
MEMO1
IER3
FLOT1
TM2D2
ADAM9
PTBP1
GTPBP6
PMF1-BGLAP
PMF1
SUSD4
SUMO3
UBE2B
CDKL3
PIP4P1
CLSTN1
MAMDC2
SEPTIN5
GP1BB
INTS10
SH3GL1
CHAF1A
WBP2
E2F6
ZMYND8
LIMA1
SPRED2
TRIP4
ANKS6
UBAP2L
C1orf43
SSBP1
ADGRB3
MOB1B
THOP1
SGTA
COL23A1
MIER1
DAZAP1
CALML5
ARID5B
RRP15
HNRNPH2
TNC
KANSL3
FER1L5
SLK
SRGAP2C
KCNMA1
FAM72B
FGGY
ACVR1B
STX1A
SUMO2
TPP1
ALG6
THEMIS2
HM13
SCAMP5
BSG
KDM7A
WDR62
THAP8
OTUD7A
SSH1
THRAP3
USP30
XRCC5
ETV4
SLC33A1
ADAM23
SPATC1L
STX6
TBC1D30
GNS
SMARCA4
BAIAP2
RAB3IP
LARP1
FLYWCH1
TMEM116
ERP29
ADGRL1
ITGB3BP
EFCAB7
MEOX1
RABGAP1L
IGLL5
TIPARP
EIF5A2
ANKMY1
SLC6A9
BLOC1S4
B4GALT2
ATP6V0B
DENR
PPP5D1
CALM3
TNNC2
SNX21
PRMT3
NUDCD3
DICER1
NFE2
BAX
PEAK1
HMG20A
ZNF497
RXRA
SBK1
FAIM
NSD1
SPHK2
RPL18
FAM83E
PARD6B
SKIDA1
STRA6
KDM3A
QRICH1
NOXO1
GFER
TCAF2
NPEPPS
RPS11
SCYL3
RMND1
ARMT1
PSMD5
EIF3F
TEX46
PLAGL1
KDM1A
AP2A2
PHF19
SF3A3
TFDP1
VWA7
TGIF1
LPCAT3
LMAN2
GRHL1
NDUFAB1
TMEM18
LYPLA1
MTUS1
CORO7
METTL1
EEF1AKMT3
CYP27B1
HDAC6
CBX7
SAP30
BAHCC1
ATP6V1C1
RNPEPL1
PRKCA
NEXN
LSG1
UBE2E2
SFXN1
RRAGC
KDM4C
RARA
GRIN2D
FASN
NDUFS7
MAZ
NR5A2
NAPA
SPTAN1
REEP4
RNF223
PRAME
SH2B1
LUC7L2
CRYAA2
CRYAA
TMEM59
HSPB1
SYNCRIP
KRT80
TSC1
SERP1
GFI1B
EIF2A
MKLN1
NUF2
BNIP1
ARID1A
TMCC3
PYCR2
HOOK2
TTC32
CHD7
UBE2L3
TMCC2
PLEKHF2
HOXC13
MINDY2
FBXL3
DNPEP
ST6GALNAC1
CAPRIN2
C17orf58
PLEKHH2
MAN2A2
CHIC2
LFNG
CACNA2D2
CHMP7
NFU1
MARVELD1
DRC7
USP28
PHF21A
MYL12A
ACTN4
RTN4
KDSR
WWP1
AAAS
RNASEK
C17orf49
WNK1
EPB41
PTP4A3
BACH2
FZR1
FMC1-LUC7L2
FMC1
PATZ1
JMJD1C
CFAP206
RPS14
IKZF2
AIFM1
DTNB
FAM133B
SMYD1
KLHL32
IGF1R
COPS7B
CSF3R
TINAGL1
KLHL12
LRRC23
USF2
RFX1
SYT7
SLC1A7
KDR
CUTC
COX15
THAP6
NFASC
HSPBP1