ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976674 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◣ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L8
IKZF3
MTRNR2L2
MSH3
DHFR
TMEM199
POLDIP2
MYEOV
GRB7
ARID3B
SLC45A4
TES
ERAL1
MTRNR2L1
CD300LF
C8orf33
RBBP8NL
RGPD2
RGPD1
UBE3B
MRPL45
SFSWAP
POLR2J3
SLC35B1
POLR3F
DZANK1
RARB
PSMD3
BHLHE40
GRHL2
MIEN1
PGAP3
ERBB2
CRBN
VIRMA
CLPTM1
C1orf174
POLR2J2
ASB2
APOBEC3B
STARD3
TXNRD1
RBM48
PEX1
ERCC1
MMP13
MAMDC2
TFPT
PRPF31
TSR3
GNPTG
SERPIND1
CD55
HAGH
FAHD1
ISY1-RAB43
ISY1
POLR2J
TRMT1
NACC1
STAT6
TRA2B
RBBP5
ATF3
LZTR1
TMC7
PSMB7
RRP15
ESRP2
SPINK1
UBQLN1
LAMP1
UNC13D
C16orf91
LPCAT3
HES1
FLOT2
TSFM
GATB
MTBP
MRPL13
U2SURP
TET3
MTRNR2L9
TOMM22
THAP7
VPS50
HEPACAM2
SQSTM1
VAC14
PLEKHH2
NAPB
STX16
IRF2BPL
JMJD7-PLA2G4B
JMJD7
MRPS11
MRPL46
SKIL
SNRPE
PHAX
RAD51AP1
C12orf4
NDUFB3
FAM126B
ZNF576
IRGQ
SALL4
SOCS2
ZNF383
PUM2
RAPGEF3
SMN2
SMN1
TBRG4
SLIRP
ALKBH1
CCDC88B
ELP3
NDUFAB1
ERICH4
DMAC2
CYP2A13
MRTO4
EMC1
ABCC10
NAGPA
IDH3B
CARD16
NDUFA2
IK
TRMO
SENP1
PFKM
KRT80
HEXA
ITFG2
DNAJC11
YAP1
DDX46
SLC25A53
MFSD10
SAP30BP
RECQL5
SUPT6H
SDF2
SLC25A45
FRMD8
LSG1
MFSD3
GPT
SERP1
EIF2A
POM121L12
RPS26
RGS3
ZSCAN25
TRIB1
UBE2I
SUMF1
RAB3IP
DDX23
TTC31
CCDC142
ZNF17
DDX41
SRI
CLDN9
ELFN2
TJP2
CHMP7
C19orf48
FAIM
PRKRIP1
BRIX1
ZNF3
TRAF4
RARG
ZZZ3
EPHB3
GABRR1
POMZP3
CDKAL1
DIABLO
SUPT7L
SLC4A1AP
ZBTB45
AGTPBP1
PHLDB2
MOCS3
DPM1
ATG14
MTUS1
SUPV3L1
REEP4
TIMM22
TOP3A
SMCR8
ZMYND8
LMAN2
DENR
STYXL1
PCNP
HUS1
MED20
BYSL
GADD45A
DOK7
MTO1
GET3
EIF3F
METTL2A
CASC3
SPHK2
RPL18
FAM83E
RALGDS
TBL1X
METTL2B
POLR1H
ATAD2
DPP3
STON2
BTNL8
ZNF524
FIZ1
ZGPAT
ARFRP1
IRF2BP2
KLF10
PSME3
TFAP2C
PPWD1
CENPK
TTI1
RPRD1B
PRR3
GNL1
ZBTB7C
MAPKAPK5
FRG2
PSMD1
EIF3H
FAM133B
KAT5
ATP5MF-PTCD1
ATP5MF
FSCN1
IL1R1
PHF3
PTPRU
VPS33A
DNAJC30
BUD23
ZNF830
CCT6B
GCN1
TIMM50
ZC3HC1
CCDC97
RPL26L1
CCDC59
ZSCAN22
GFM1
SH2B1
DLC1
TUFM
RAE1
WASHC5
NSMCE2
KRR1
NGDN
GTF3C5
GTPBP4
SPATA25
NEURL2
CTSA
HEMK1
C3orf18
MIEF1
RCE1
CDK5RAP2
TRIM16L
RXRA
NFKBIA
ATP6V0D1
AGRP
PNO1
THBS3
MTX1
NUP214
NVL
HS3ST6
ECHDC1
DGAT2
SLC2A4RG
LIME1
MUL1
LGALS8
TXN2
USP30
SMG7
ECH1
ZNF2
TMEM208
LRRC29
BMS1
ZNF165
AXL
BIRC3
PTPRR
PLA2G2E
RPS12
ZNF335
CDK12
PDCD6IP
CCDC57
SPAG16
STMN3
RTEL1
QRICH1
ATG101
UPK3BL1
FOCAD
ZNF579
BAIAP2
EIF1AD
BANF1
PLA2G2A
MIDEAS
BRF2
CHRM3
MACROD1
BCL3
TIPARP
WDR53
FBXO45
COLEC11
ANXA2
ASB6
SKIDA1
GLTP
LYPLA1
PLEC
LMNA
LSM5
FCF1
AREL1
FRMD7
HCAR2
NME3
MRPS34
EME2
TSN
KLF9
MRPL1
MED6
TBL1XR1
MARVELD1
URM1
RPL23A
RAB34
GLCCI1
LANCL2
HSPB1
PSMG2
CEP76
ZCWPW1
MEPCE
PHB2
ZBTB7B
TAS1R1
NOL9
MAP3K7
TSR1
SGSM2
ZNF408
ARHGAP1
TRIP4
STX6
BCAS1
SEC13
HSPBP1
BRSK1
HOXA3
ZFHX3
MDGA1
GSR
RDH5
ITGA7
BLOC1S1
S100A2
GTF2H3
EIF2B1
EIF3E
MRPS22
RPL30
SPNS1
SEMA3B
PLAGL1
RBM42
MYL12B
USP39
C2orf68
KAT8
STX1A
C19orf33
VPS11
BNIP1
ERGIC2
PDE12
MMP10
PGGT1B
TMEM205
RAB3D
CCDC159
ATP6V1C1
TACC1
DNAH5
RRNAD1
ISG20L2
UPK3BL2
UTP20
TMEM95
KCTD11
ADGRL1
PUS10
PEX13
ANKK1
CDC6
EXOSC5
BCKDHA
C7orf65
RINT1
GPSM3
UBXN1
PBX2
NDUFB5
MRPL47
SYT12
TRMT2A
RANBP1
YJU2
RARA
PRSS22
NME1-NME2
NME1
PAXBP1
MRPS7
GGA3
EIF5A2
SF3B3
COG4
COPS7B
TBC1D17
AKT1S1
ANXA3
EBPL
COG2
NUDCD3
OAZ3
MRPL9
FIS1
ZFP64
SCARB1
MED4
ERLIN2
SEMA3F
PTPN2
SEMA4B
FOXA2
UVRAG
MRPS15
EPB41
NOTCH3
MLX
COASY
IQUB
PIM1
TJAP1
BANP
MBD6
DDIT3
C8orf74
LRFN4
PES1
TLE3
CAPN14
SETD3
CCNK
POLR3B
ZNF703
OR6B2
NDUFA10
ZCCHC4
MAD2L1BP
ITPKC
COQ8B
AQP5
GTPBP2
PTAFR
TTC32
SSNA1
ANAPC2
TPST2
HR
PPP1R37
YIPF3
POLR1C
GPATCH3
ZRANB2
ANAPC5
TNFRSF12A
THOC6
HCFC1R1
CLDN6
EVPLL
FAM162A
CCDC58
ABCC3
RBP2
AURKAIP1
ATG9B
ABCB8
FEM1A
C5orf51
SLC25A11
RNF167
CNPY2
RBM19
KYNU
IPO11
SYT1
KMT2A
CLPB
SNRPB
CD63
VGLL4
LARP1
PIK3C2B
MRPL48
TMEM123
MICAL2
PMPCA
ENTR1
SBNO1
HTRA2
DQX1
PRKAR2B
SETD1A
NCBP2AS2
NCBP2
SLX4IP
MKKS
NUDT5
CDC123
PHF5A
ACO2
ISG20
ASH2L
ARHGAP30
GJB7
LIMA1
RPS14
TBL3
TCERG1
RNF151
CDC23
DHRS13
RWDD1
TXNL4B
DHX38
CWC25
WDR36
TMCO1
PPIL3
NIF3L1
MRPL10
LRRC46
MRPL21
IGHMBP2
TMEM207
RASEF
RBPMS
TGFBI
BIRC2
RTF2
CCNT1
INTS1
TCAP
PNMT
PTP4A1
SNRPB2
RBX1
NDST1
CDK5RAP1
TEKT2
ADPRS
OR2T1
COX16
SART3
ISCU
MEAK7
MED1
TAGLN2
ADAMTS16
TPRKB
UPP1
DHRS3
GPC1
LY6D
KPTN
DDX49
COPE
SEMA6A
PWP1
FAM83A
RPS11
AP5Z1
IER3
FLOT1
TPRN
TMEM203
NDOR1
ACP3
LGALS7B
CDK11A
DNTTIP2
CTTN
CWF19L2
PMEPA1
CLDN4
RAB40C
MCC
MTHFR
CLCN6
SEPTIN9
NUP107
TSC1
GFI1B
CSTF1
AURKA
DUS2
DDX28
GRK7
TAF6
CNPY4
EIF2S1
ATP6V1D
KMT2D
GRWD1
RP1L1
KCNK15
PDAP1
BUD31
UCKL1
NPAS1
MRPS26
GNRH2
PTPN12
E2F8
UPK3B
BCAR1
TMEM41A
PLXNB2
WDR97
MAF1
PEPD
MIDN
ZMAT2
WDR70
LONRF3
PSMD5
TGIF1
METTL1
EEF1AKMT3
CYP27B1
LRRC23
TMBIM1
MRPL40
HIRA
NAPRT
MROH6
GTF3C3
MB
NDUFA9
AKAP3
NR1H2
OR2W3
PCID2
CUL4A
UROS
BCCIP
SRD5A1
HSPB7
TONSL
ENOSF1
KMT5C
SIGLEC15
PARP4
DYNC2I2
SNRPD2
QPCTL
TCF7
FAAP20
LIF
ZNF398
ADPGK
FADD
KCNJ15
RHOD
ERCC5
RAB5IF
SPRED2
EPS8
LTO1
UTP3
STK36
RNF25
SPAG9
TTC6
FOXA1
FAM153B
PLD1
PFDN1
TBCB
POLR2I
OVOL3
C6orf226
ARL8B
MCM7
AP4M1
PIGO
SSTR5
EIF3D
CCDC43
SSBP1
GSN
XAB2
PCP2
GTF2H2C
GTF2H2
FUCA1
SLC7A6OS
PRMT7
SF3A3
GPRC5A
MAN2C1
TPD52L2
ABHD16B
PSMC3
JADE2
TRMT112
PRDX5
MED23
AAR2
CAPN1
METTL7A
DPP8
LY6E
DHX8
FTH1
TMPRSS4
SLC6A2
GUCA2A
ZNF292
PERM1
COMMD5
WDR46
PFDN6
ZNF302
CWF19L1
TIPIN
ZFPM1
PFDN4
UNC50
COA5
RBM22
CORO1C
SREK1IP1
CWC27
PRR12
C15orf62
KMT2E
NFE2
SMG5
TMEM79
PSG9
XPC
LSM3
SPRYD4
PPAN-P2RY11
PPAN
ANGPTL6
P2RY11
TBC1D23
SHC1
CKS1B
SSH3
SLC24A1
INTS14
PPFIBP2
TMEM212
CCZ1B
ZG16B
RNF19A
ANKRD22
ANKMY1
RNPEPL1
MAP4K1
EIF3K
NDUFA4
SH2D4A
CALML5
FOS
PKP2
RPS21
TGFB1
TINAGL1
ARFGEF2
RNF39
PSG8
SNRNP70
RNF40
CCDC189
ZNF384
MEGF8
IGSF9
OLFML2A
SPDYE14
SPDYE10P
ZNF561
PSG1
SPINT3
MITD1
HMGA1
SNRPD3
GUCD1
SYNCRIP
PHF23
ALDH18A1
PDXK
HNRNPA2B1
CBX3
GET4
SLC39A10
EPC2
WDTC1
DDX17
EIF4G2
NUDT3
STRBP
SLC25A25
NAIF1
GABARAP
SEPTIN7
WASHC2A
WASF2
WASHC2C
UBE2Q1
DUX4
GPR137
BAD
MARCHF9
CDK4
GSK3B
RSF1
AAMDC
MSMO1
RPGRIP1L
FTO
DAGLA
FRG2C
MDM2
EFNA3
SYNGAP1
CUTA
CLCN7
SMARCD2
USP49
DDX42
CCDC47
SRSF1
RPUSD4
FAM118B
GBA
ILF3
SERPINI1
PDCD10
COMMD9
MAN1B1
ATP6V1G1
MACC1
ANGPTL4
RHOBTB2
PTPRF
FAM72C
SRGAP2B
FAM72D
OSGEP
APEX1
SLC35A5
ATG3
PGLYRP4
MCOLN1
FANCA
RAD9A
PDGFB
SRGAP2
FAM72A
XPO7
CLN3
APOBR
HPS5
GTF2H1
INO80C
PRICKLE1
ENTPD4
MYCL
MFSD1
PPP6R1
LAMA3
SLC4A2
CDK5
DVL2
SHLD2
GLUD1
PCIF1
CEP162
UBE3C
ZDHHC6
VTI1A
AMDHD2
ST7
EIF2D
ARHGAP32
WWOX
CELA3B
PMS1
ORMDL1
STAU2
MEF2C
DIP2A
MEMO1
TM2D2
ADAM9
PTBP1
GTPBP6
PMF1-BGLAP
PMF1
SUSD4
SUMO3
UBE2B
CDKL3
PIP4P1
CLSTN1
ZNF668
SEPTIN5
GP1BB
INTS10
TMEM40
SH3GL1
CHAF1A
WBP2
E2F6
ARID2
ANKS6
LRRC47
UBAP2L
C1orf43
ADGRB3
MOB1B
THOP1
SGTA
COL23A1
MIER1
DAZAP1
ARID5B
HNRNPH2
TNC
KANSL3
FER1L5
SLK
SRGAP2C
KCNMA1
FAM72B
FGGY
ACVR1B
SUMO2
TPP1
ALG6
THEMIS2
HM13
SCAMP5
BSG
KDM7A
WDR62
THAP8
OTUD7A
SSH1