ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976678 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◣ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
MTRNR2L8
GRB7
ARID3B
MTRNR2L2
MSH3
DHFR
ERAL1
SLC45A4
RBBP8NL
TMEM199
POLDIP2
MTRNR2L1
MTBP
MRPL13
SLC35B1
GRHL2
SFSWAP
NAGPA
RAPGEF3
CD300LF
MRPL45
RBM48
PEX1
CRBN
C1orf174
TES
ISY1-RAB43
ISY1
PSMD3
TMC7
C8orf33
MIEN1
ASB2
SPINK1
ELFN2
BCL3
UNC13D
POLR2J3
GSR
TXNRD1
ANXA2
STARD3
TET3
TOMM22
ABCC10
SMN2
SMN1
PGAP3
ERBB2
SUPT7L
SLC4A1AP
POLR2J
SQSTM1
SKIL
IDH3B
CDKAL1
SERPIND1
VPS50
HEPACAM2
GPATCH3
RPTOR
HES1
RGPD2
RGPD1
STX16
CARD16
PLA2G2E
UBE3B
IL1R1
ZDHHC6
VTI1A
TRIB1
C19orf33
ZBTB7C
FLOT2
EIF2D
POLR3F
DZANK1
SOCS2
ESRP2
GLTP
IER3
FLOT1
RARB
ZZZ3
CD55
BANP
GATB
RGS3
CSF3R
PLD1
SLC25A45
FRMD8
PLAGL1
HAGH
FAHD1
SAP30BP
RECQL5
ATG9B
ABCB8
SNRPE
PSMB7
LAMP1
SUPT6H
SDF2
RBBP5
SPHK2
RPL18
FAM83E
ZNF398
TAS1R1
NOL9
APOBEC3B
GET3
ANGPTL4
ATF3
SALL4
JMJD7-PLA2G4B
JMJD7
SPAG16
WASHC5
NSMCE2
CLPTM1
BIRC3
PMEPA1
SLC25A53
EIF3H
TPRN
TMEM203
NDOR1
U2SURP
RAD51AP1
C12orf4
MRTO4
EMC1
EIF3F
NDUFAB1
EPHB3
TRIM16L
KMT5B
MOCS3
DPM1
BHLHE40
RPS26
MTUS1
ATP5MF-PTCD1
ATP5MF
ZNF383
PTPRR
MARVELD1
TMBIM1
IRF2BPL
DNAJC30
BUD23
YAP1
RTF2
FAIM
ZNF830
CCT6B
EIF5A2
ATP6V1G1
SENP1
PFKM
TJP2
PLEC
ELP5
CTDNEP1
TRMT2A
RANBP1
TFAP2C
TRAF4
FAM83A
LANCL2
SEMA3B
ERP27
CYP2A13
KLF10
PKP2
NGDN
IGFL1
PRKRIP1
HUS1
NAPB
THAP7
STX1A
ST6GALNAC1
TSR3
GNPTG
POLR2J2
SPATA25
NEURL2
CTSA
ZNF335
JRK
HEXA
PDAP1
BUD31
ZNF165
NFKBIA
BRPF1
TSN
OAZ3
MRPL9
TRA2B
STX6
DUS2
DDX28
SEPTIN9
GPRC5A
RHOD
COMT
ALDH3A1
DDX41
RAB3IP
REEP4
WDR53
FBXO45
NKD2
SF3B3
COG4
PES1
DHRS3
SUMF1
ZBTB7B
ZSCAN22
ERICH4
DMAC2
C16orf91
MMP10
CCDC59
AXL
LRRC23
FAM162A
CCDC58
CDC6
RNF39
MEAK7
SPNS1
REXO1
TIMM21
FBXO15
CCDC97
MMP13
EFR3A
ZGPAT
ARFRP1
TSFM
KAT8
E2F8
SLIRP
ALKBH1
INTS1
LTBR
EMC4
AGAP3
ERCC1
NME1-NME2
NME1
SMG8
STON2
OPA1
RALGDS
TBRG4
VAC14
LTO1
GOLGA3
TMEM205
RAB3D
CCDC159
KMT2D
GADD45A
TRMT1
NACC1
FOS
NRDE2
C5orf51
ELP3
RPS11
EIF4A2
COLEC12
TIPARP
STMN3
RTEL1
KRT80
FAM98B
PSG9
SLX4IP
MKKS
IRF2BP2
HR
LIPK
TFPT
PRPF31
MAP3K7
NOTCH3
GSDMD
DOK7
GABRR1
URM1
PRKG2
ITGB3BP
EFCAB7
HACD2
SCRN1
ZNF2
ECHDC1
GUCA2A
NOL12
MRPS7
GGA3
UPK3B
MTA3
KCNG3
NPAS3
UVRAG
LZTR1
DPP8
SEMA5B
KIFC2
CYHR1
NUP107
OXNAD1
DPH3
TAF2
STAT6
ATG14
LMAN2
GTF2H3
EIF2B1
LRMDA
KLF6
UPP1
TOP3A
SMCR8
ABT1
ALDH3B2
SRI
ZP3
DCTN6
EXOC6B
MTRNR2L9
ATF6
IKBKB
ANKMY1
RNPEPL1
MRPS33
BRF2
FUCA1
IP6K3
ITFG2
LSG1
TINAGL1
BRIX1
EVPLL
RNF40
CCDC189
MTHFD1L
EPS8
SART3
ISCU
MB
TBL3
RNF151
TRIAP1
RTN4IP1
QRSL1
ZNF408
ARHGAP1
NFE2
MRPS35
SSNA1
ANAPC2
AAAS
GTF3C5
TTC31
CCDC142
ZFHX3
GRK7
CCNT1
CTNNA3
TRMO
ANKK1
PDLIM2
MRPS11
MRPL46
DPP3
PLA2G2A
PHLDB2
SUSD1
PRR15
DDX46
PLEKHH2
NDUFB3
FAM126B
EXOSC5
BCKDHA
PAXBP1
CACTIN
BNIP1
PFN1
ENO3
CLDN9
CIDEA
ZCCHC4
CEBPA
LAMA3
PHAX
DDX23
SLC24A1
INTS14
ZRANB2
BCAS1
METTL1
EEF1AKMT3
CYP27B1
TSC1
GFI1B
COLEC11
TCERG1
IQUB
FAM184A
INO80D
PIM1
ZSCAN25
NVL
CENPBD1
CCND3
TAF8
TOX2
CATSPER2
SUPV3L1
KRR1
CLDN4
SYT1
DUSP2
METTL2B
MAPKAPK3
CISH
RXRA
NDUFA9
AKAP3
MED1
SREK1IP1
CWC27
COPS3
MRPS15
COPS7B
GINS1
ZBTB45
SYNCRIP
RWDD1
APOBEC3H
TIMM22
TRIM17
TXN2
CCDC88B
XAB2
PCP2
HERC5
DNAJC19
NPAS2
ZMYND8
CALML5
DUSP6
NOP16
HIGD2A
TRMT12
LY6D
ADAMTS16
NUP214
CELA3B
DNAJC11
FLRT2
STYXL1
CNPY2
NDUFS3
KBTBD4
POU5F1
ZNF256
PTK2
NR2F1
C12orf43
METTL2A
SLC2A4RG
LIME1
STEAP3
VPS33A
SERP1
EIF2A
ZMPSTE24
PNKD
PARG
MFSD10
TRIM6-TRIM34
TRIM6
MDGA1
ANP32A
CASC3
CEP162
NDUFA2
IK
TNRC18
ATP5MG
GFM1
GSN
MRPL21
IGHMBP2
ELAPOR2
PLEKHA7
CDC42EP5
SAMD10
PRPF6
CCDC174
DIABLO
MAPKAPK5
SLC12A4
GGA1
RPS21
PPWD1
CENPK
MBD6
DDIT3
SLC26A11
SGSH
ALG1L
BMS1
UBE2L3
HABP2
DTX4
NUP54
FRMD7
TACC1
MNAT1
ARID5B
UBQLN1
NDUFB5
MRPL47
VPS52
RPS18
ALDOA
SLC25A51
CPVL
CHN2
NCAPH2
LMF2
CBLC
HCAR2
AP5Z1
RARG
SMG7
VGLL4
USP30
NUDCD3
SEC13
TPST2
C7orf65
GPBP1
RPEL1
PDCD6IP
HSPBP1
BRSK1
NDRG1
MRM3
GLOD4
MUC20
CDK12
PSMD1
HSPB1
LSM5
GPN1
CCDC121
KRT18
FEM1A
COMMD4
LMNA
TMEM69
GPBP1L1
PIKFYVE
FBXO32
ZNF260
ZFPL1
CDCA5
TMEM262
PHB2
TRIM29
SRRD
HPS4
RBX1
FAM133B
RPL23A
RAB34
ZBTB20
PAN2
IL23A
PRKAR1A
ATAD2
TTC32
MINK1
SGMS2
MCC
PLEKHG6
GGCT
EXD2
PCBP2
HIVEP2
DOLPP1
PSMB6
EIF1AD
BANF1
ELF3
PHF3
KLF3
MED4
ZBTB46
RPS12
RBM42
ASH2L
GOSR1
METTL3
ORMDL3
LGALS8
ZNF497
PRKAG2
TMEM207
NAPRT
MROH6
FGD3
MRPL3
SLC44A2
UBE2Q1
ARID2
MED23
RBM19
FANCD2
PRKAR2B
WDR75
AMN1
FBXO11
IFI16
ASAP1
FSCN1
MAN2C1
ZNF17
OBSL1
INHA
NUDT5
CDC123
CCDC77
KDM5A
APOBEC4
KAT5
LRRC47
BAG6
APOM
DNAJB12
DOHH
AAR2
TSR2
COPZ1
SDHC
MPZ
RDH5
ITGA7
BLOC1S1
GPC1
MCM7
AP4M1
BBS1
JADE2
KDM3A
AGTPBP1
TLE3
AP3S2
LONP1
CATSPERD
RPL26L1
DSTYK
DLC1
PIM3
GID4
ATPAF2
FGF1
BCAR1
ZNF3
ADAMTSL4
IPO11
CEP63
ANAPC13
ARL14EPL
ANKRD22
XPNPEP3
ST13
DNAJB7
PSG4
NCBP2AS2
NCBP2
GLCCI1
RASEF
KRT17
ALG10
PERM1
FAM153B
PAQR9
SENP2
ARMC1
TACSTD2
VIRMA
TMEM208
LRRC29
SH2B1
GTF2H4
KAT6A
MIDEAS
MED20
BYSL
TRIM55
PIK3C2B
ID1
TPD52L2
ABHD16B
PHF12
FBXW2
WDR83OS
WDR83
MAN2B1
LZTS2
TRMT61B
RPLP2
PIDD1
RPSA
METTL6
EAF1
CENPW
C1QTNF6
CCDC192
EPHX1
CIPC
MYL12A
RAB24
PRELID1
ENKUR
DNAH5
BCL6
ICE1
IGSF10
ARL1
MPPED2
PIP4P2
ECH1
COL23A1
PRR3
GNL1
RPS14
SMG5
TMEM79
EFCAB14
ZBTB6
TENT5B
LIMA1
ATG101
COPS4
EIF3E
UBOX5
FASTKD5
LYRM4
FARS2
TGFB1
C19orf48
TEFM
PPFIBP2
CDC23
GABARAPL1
RRP7A
PPP6R1
DHRS13
GCN1
TOMM6
ANXA3
NEMF
TNFAIP1
IFT20
VWCE
PRICKLE4
FRS3
CEMIP
HMGCL
TRIP4
EPYC
MTO1
TFIP11
VPS37A
CNOT7
ZNF581
CCDC106
ZNF580
TMPRSS13
CPT1A
PALB2
DCTN5
FAM187A
EFTUD2
CCDC103
NSFL1C
SERPINB2
PSG8
PRDM1
KYNU
TIMM23
KIAA1217
CLCN3
ERGIC2
PLXNB2
GTF2H2C
GTF2H2
MED18
TTC6
FOXA1
TMEM68
TGS1
SDCBP2
NPTXR
ARHGAP32
KLF9
C8orf58
CCAR2
EDARADD
PROSER1
NHLRC3
PPIH
RAD52
RPS20
RPS16
ZNF703
ALG10B
TOMM70
LNP1
EXOC5
AP5M1
ZNF503
BDP1
GABRE
BAIAP2
TRIQK
TXNL4B
DHX38
VILL
GSTP1
PTMS
KCNH8
PLA2G4E
ZNF250
DUT
TMEM40
RCE1
TMEM242
PRSS22
PPP1R37
UCKL1
NFKBIZ
ADPGK
GTSF1L
MRPL12
HIRIP3
PNPT1
CWF19L1
CLASRP
SLC39A7
RXRB
HSD17B8
PSME3
NDUFS7
FUT1
FGF21
SECISBP2
ZNF460
CAPN14
SREBF1
PSMD6
BCL9
COLCA2
COMMD1
VWA1
ACER2
ENDOV
CCT4
PINX1
SCARB1
FASTKD2
C2orf49
RPL21
TPGS1
NIBAN2
API5
SEMA3F
TM4SF4
UPK1B
RAE1
LRFN4
HOXA3
CXXC4
LOC100129484
CCZ1B
TP53I3
HAX1
LENG8
NAMPT
OR6B2
NDUFA10
NGB
DGAT2
UTP3
PNO1
TAGLN2
C2CD5
TBCK
AIMP1
FOCAD
PSCA
PRR12
URB1
TMEM94
VWA7
CWC25
TBC1D17
AKT1S1
RFFL
TNFRSF12A
THOC6
HCFC1R1
CLDN6
TARBP2
MAP3K12
TBC1D4
ADAP1
SNRPC
TSR1
SGSM2
PTPN14
POLD4
ACAD9
MAP2K3
UBALD2
DHX16
ATP5MPL
TNPO3
OR2W3
MCCC1
BORCS7
PPIL3
NIF3L1
ZNF76
PSG7
FAF2
RILPL1
DUX4
ZC3HC1
ALKBH3
CBLL1
PSMC3
TAF6
CNPY4
WDR24
MRPS21
KMT2E
ETV4
SLPI
TCAP
PNMT
PHF5A
ACO2
KLK6
POLE3
C9orf43
TSC22D4
NYAP1
SLC11A2
SAMD4B
RBM28
PTP4A1
TRIM69
CERK
SLC9A8
FRMPD2
AHCY
RPL13A
ZFP62
HES5
NOL8
CENPP
FAM222B
EIF2S1
ATP6V1D
NBEAL2
SELPLG
XPC
LSM3
HTRA2
DQX1