ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2140209 | MM.1S
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◣ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

UBE3C
SH3GL1
CHAF1A
SUMO3
ANKS6
ADGRB3
DAZAP1
SHLD2
GLUD1
PTBP1
MEF2C
SLK
SUMO2
ALG6
HM13
SCAMP5
OTUD7A
MIER1
SUSD4
ADAM23
SMARCA4
SLC4A2
CDK5
ARHGAP32
FGGY
STAU2
RALGDS
BLOC1S4
MYCL
ACVR1B
SBK1
NSD1
NPEPPS
AP2A2
CLSTN1
RABGAP1L
TFDP1
GRHL1
FLYWCH1
CBX7
SAP30
PRKCA
UBE2E2
SFXN1
GRIN2D
FASN
PPP5D1
CALM3
NR5A2
SPTAN1
KDM7A
TM2D2
ADAM9
CHD7
PLEKHF2
C17orf58
CACNA2D2
PHF21A
ACTN4
PATZ1
CFAP206
DIP2A
ST7
DTNB
IGF1R
USF2
CUTC
COX15
PRKCE
MRPL45
CHIC2
ATXN7L3
PCIF1
ADCY9
UBXN2A
LASP1
FCHSD2
IKZF2
CABIN1
NFASC
IRF2BP2
EFNA3
LYPLA1
FBXL3
OAZ1
PEAK1
HMG20A
SLC25A11
RNF167
UPF1
BSG
CTBP1
LCOR
MELK
GAB2
CBX6
PTBP3
MLLT10
SKIL
MRFAP1
PHIP
USP28
EIF4H
IFT140
CRAMP1
PKNOX1
PTP4A3
SCYL3
AUTS2
PTPRG
LIFR
GNB1
FBXL22
SPRTN
EXOC8
STAT5B
RYK
PARD6B
ZBTB14
SMURF1
ARPC2
LYPLAL1
ATOH7
FEZ1
TMEM266
FBXL5
RABEP1
P4HB
ATG9A
ANKZF1
RALGPS2
NF2
HHAT
NOXO1
GFER
PRMT3
C3orf70
AMMECR1
SNX19
ARRDC3
BTBD3
AVEN
NEK6
SLC6A6
MAZ
TCTA
RHOA
UBAP2L
C1orf43
EXOC6
SNX12
SIAH1
CCDC88A
TSPAN7
PAPSS1
THAP12
GVQW3
ZNF217
ZC3H7A
FZR1
PPP2R3B
ZNF787
UBE2E3
HP1BP3
PTPRF
YEATS2
NSD2
APBB1
MAPK8IP1
SGPL1
WWP1
PXN
CPEB2
TAOK1
ABCA5
LARP1
MAST2
LGALSL
RBM14-RBM4
RBM14
MKLN1
SINHCAF
SRCIN1
PPARGC1A
GPAT4
RBKS
BABAM2
MINDY2
FZD3
FBXO16
PWP2
LOC102724159
GNA13
LRRC20
SRSF6
UBTF
KLF16
HSP90AA1
NDUFA4
TP53BP2
MCM9
SPEN
DLL3
DENND1A
C10orf95
LUC7L2
SYNCRIP
FMC1-LUC7L2
FMC1
MTMR3
CTNNA2
RNF152
OSTF1
NMRK1
SPCS3
PDIK1L
THUMPD2
MAP3K2
THOP1
SGTA
SSBP4
DLGAP4
RUFY1
VOPP1
GNB4
ASPH
MAP4K3
ACACA
TADA2A
RXRA
DHX15
TCHH
TRMT2A
RANBP1
DENND2B
TMCC1
PRR7
MPP6
LARP4B
FAM81A
ENTPD4
PSMA1
PDS5B
PDE3B
AMOTL1
PPP4R2
NELFCD
EPC1
DCK
LIMA1
MAPT
SMARCB1
MRFAP1L1
NCOA5
MAP4K1
EIF3K
HNRNPU
REST
CDKL5
FAM168B
CAPZA2
PPP2R5A
SUZ12
CNOT8
NEO1
RAB6A
C15orf61
ATP2B1
LPIN2
PAIP2
CHD1
SPAST
MYO1D
PXT1
KCTD20
SRSF4
SFR1
TARBP1
CRTC1
NEURL1
SCAMP4
ADAT3
SLX4
PPM1A
PTAR1
HIF1A
NFRKB
UBXN4
THAP1
PACS2
BRF1
IKBIP
APOA1
APAF1
SPATS2
QRICH1
SSH1
B4GALT2
ATP6V0B
RNF170
KIF1C
INCA1
HOOK3
RRP1
PCID2
CUL4A
ROCK2
WDR45B
PPP6R2
GTF2I
C12orf66
ZNF236
MPP5
IFI44L
KDM2A
ASXL2
PTK2
ADARB1
CHEK1
OPN3
CHML
CBLN1
RARG
TEX46
KDM1A
THEM4
ANKRD26
SF3B1
LHFPL1
RGPD2
RGPD1
PTPN12
EFNA4
LMNB1
KLHL8
DGKZ
CDON
C9orf40
BRD4
RNF187
STRN4
FKRP
EPC2
SNORC
POLA2
MDM2
SLURP1
XRCC5
ATXN7L2
NR3C2
UBE2Q2
BTBD9
MXI1
CDC73
NEDD4
FKBP1A
ARHGEF12
PTMA
CD47
ZNF318
ZBTB12
EHMT2
C2
GRAMD4
ZSWIM5
ARMH3
BRD3
ZDHHC5
ST8SIA1
RNF44
MIF4GD
COX20
ZZZ3
UGCG
DISC1
AMIGO1
TAFA5
RAB10
CHRNA7
ARHGAP28
SRSF11
LRRC40
CIC
ZNF185
BTG3
POLE4
SPTBN4
LCORL
DIPK2A
MTRNR2L8
FOXO3
TPBGL
TSC22D1
BCL2L1
WDR87
SIPA1L3
CNKSR2
GPATCH8
LBR
TBL2
GMEB2
METTL9
MADD
LLGL1
KMT2C
FBXL16
CUL5
SREK1
KLHL24
PHC2
TPM1
AKAP1
FAM189A1
USP6NL
NAPEPLD
BSN
ADM
HSF1
BOP1
SYNGR1
PDS5A
BMI1
COMMD3-BMI1
COMMD3
TANC2
COPG2
OPRL1
LKAAEAR1
MATR3
ZNF652
RGS19
MAK16
DRAM2
CEPT1
DENND5B
YTHDF2
RAD23A
HECTD2
TP53I13
ABHD15
ZNF821
TMEM145
ETNPPL
AGTPBP1
BTBD1
DUSP14
DNAJC5
TACC1
SLC10A3
UBL4A
ZBTB8OS
RBBP4
SLC25A12
HNRNPA2B1
CBX3
C2CD5
TM7SF3
MAPK3
YPEL1
MCUR1
FBXL17
SOX12
ZFP1
HSPA2
EBAG9
LRIG3
ACSL4
ADI1
PLEKHA5
CCDC171
MEX3B
KLF13
KLHL32
TMEM39B
PPP1R3E
BCL2L2-PABPN1
BCL2L2
TMEM201
RNF144A
TOB1
HK1
DBNL
GRK3
VEZT
FGD6
PRKAB2
CHD1L
ARRB2
GFUS
C5orf24
CSGALNACT2
COP1
VHL
SLC25A22
N6AMT1
INSR
MTRNR2L2
MSH3
DHFR
SRCAP
LOC730183
RCAN3
TMEM170B
MINK1
LTBP4
ANKMY1
VDAC3
SNX10
DUSP28
BMPR1A
GALE
SFMBT1
USP31
ZCWPW1
MEPCE
TIGD2
UBXN2B
LAMC1
ANKDD1A
BCL7B
SMAD2
PAXIP1
LRBA
KIAA1549
TUBD1
RPS6KB1
SFXN4
CCNF
RYBP
BRD2
JMY
SAYSD1
CHAMP1
AFDN
EVL
UHRF1BP1
TRPM7
CLN5
MTSS1
GSKIP
ATG2B
ADRA1A
RALB
KBTBD2
CDC34
CAPRIN1
DYNC2H1
FBXO30
PBRM1
GNL3
BARX2
PUM1
MTCL1
MYL5
ATP5ME
PIK3CB
UTP23
SUGP2
ARMC6
PPM1E
FANCC
ARHGAP5
RASA1
RNFT1
INTS7
DTL
VAPA
BAG3
AGO2
AGO4
MYO6
TRIB1
CD99L2
CAMKK2
PTCH1
CRY1
LRFN3
STS
PUDP
FSTL4
ANP32E
LEF1
PTPRK
FAM124A
MLH3
CDK13
SYT11
NDUFAF3
GON4L
DALRD3
JMJD1C
ZNF516
REEP3
PODXL2
NFATC3
RANBP3
TXN
TMEM18
ARSG
EHMT1
SLC16A6
ZNF740
CSAD
DYRK2
RIMKLB
PPP3CC
DHRS13
ZBTB46
SF1
STK32C
LRRC27
ADAM22
GDI1
CLK4
ATP11A
NDUFV2
STAG1
TEX264
VGLL4
CDC20B
TAF12
HAGHL
EMILIN2
CCDC78
GNL2
MAML3
DPF2
MSL3
TMEM191B
INTS13
FGFR1OP2
GCFC2
FOXN3
PGPEP1
TOLLIP
RAP1A
JOSD1
GTPBP1
CDKN1C
SCN8A
MAP2K7
PFN1
ENO3
CCAR1
MECP2
MAP4
HNRNPA3
TAX1BP3
PRR30
PREB
EMC6
BCLAF1
DVL1
NFKB2
CAMLG
G3BP1
RFC2
POM121
NKIRAS1
NR1D2
LONRF1
PTPN14
PRKAR2A
UBE2D3
AATF
PREX1
DUSP8
ASCC1
ANAPC16
TLE5
OSBP2
PRMT2
TRIM33
POLR2J3
ANXA4
AAK1
SMARCC1
COQ10A
MYRIP
IGFBP3
GAREM2
MRPL54
APBA3
ZNF524
FIZ1
ZNF865
KIFC3
ARF1
RAB3IP
CSNK1E
CTSC
TBC1D14
EPS8
PHF12
KHSRP
RPP25L
STXBP1
DAG1
MISP3
GNAO1
AIG1
CLK1
YBEY
MCM3AP
UQCR11
PDXP
HSPA9
NTRK2
MTRNR2L9
THEM6
DGCR8
CELF2
CCDC34
SNX30
DSN1
TTLL6
MTRNR2L1
RNPEPL1
IFNAR1
RUNX1
KIAA0895L
FOXP1
B3GAT2
UBAC1
MEIS2
RBM33
ABCF3
PDZD8
H3-3A
SYNGR3
MGA
POU2F1
H6PD
CBFA2T2
SLC9A5
PLA2G12A
FHOD1
FAM151B
MRPL53
FUT8
ARHGAP35
ANKRD29
MIS18A
YY1
GRIP1
ARHGAP17
USP1
DOCK5
ATXN2L
ARID3B
ABCA3
ACTR5
NUP50
MAT2A
CCL5
TMEM139
NIBAN3
CASP2
RGS3
XPOT
SAFB2
SAFB
FAM53B
SNAP47
JMJD4
DPYSL2
KDM4C
MNT
PSMG3
PACS1
SLC35F6
WDR1
STAMBPL1
GPR37
ALDH3B1
UNC93B1
CENPV
CANX
ANAPC4
SDHAF3
KLF1
DNASE2
UVSSA
PHYKPL
FN3K
GAA
RPL3
RRAGD
TRAF3
PKMYT1
RPS15
MRS2
DYNLL2
CDK5R1
TBC1D12
SORBS2
KCNA3
CAMSAP1
SEMA3C
TBCCD1
DNAJB11
SRI
CHST12
PDCL3
SMAD4
TMEM17
FGF7
FAM98A
DIXDC1
MPPE1
DOT1L
SDHA
CCDC127
RNF32
EGR4
NPRL3
SPHK1
ZNF575
MBTPS1
JADE1
ARHGAP33
AP3S1
PTDSS2
TXNDC15
PITPNB
SMYD3
DGKG
PRKACB
C7orf25
BCL11A
ACSL1
CRELD2
ALG12
BCL2L13
POR
TMEM250
MCMBP
C11orf80
BAG6
APOM
RNF145
SMC5
FAM234A
HNRNPA0
POFUT2
KANK1
HSPA8
ZSWIM6
SMCHD1
BRWD1
RAP1GDS1
SAMHD1
DCTD
THOC1
CRB1
PUS7
ABCD3
CSNK1G2
PRKAG2
ETAA1
IFIT1
NCKAP5L
LRP8
SPPL2B
LSM7
HCN3
CLK2
AP1S2
SLC2A4RG
LIME1
ZNF41
TBCD
RGL1
ARPC5
ECE1
THOC3
DRG1
RAB35
GTDC1
SENP8
MYO9A
ZBTB10
SEC24D
GNAQ
DGLUCY
RPS6KA5
ZDHHC18
MAP3K14
UBE2V2
MKNK2
PRELID3B
CD1A
LRFN4
SMIM11B
SMIM11A
TBC1D5
TMEM191C
PPARA
ATRN
AFF3
ZNF3
TAF4
PRKX
GSR
SRSF3
PCM1
YBX1
RAPGEF5
PPP3R1
ZDHHC9
PHF2
LIMCH1
NCKIPSD
NR4A3
DYRK1B
RAD21
CORO2A
HES1
CBY3
PLXNA3
NFKB1
MTCH2
TTLL12
HLCS
MKNK1
ELK4
SLC25A39
GATAD2A
SCT
CDHR5
CHST10
OGDHL
IFT81
ZYG11B
XRCC2
TMEM254
EPN2
BCL2L11
ATP6V1F
RBFOX2
ATP6V1FNB
MAMDC2
C1orf198
LRRC75A
LOC100289561
ZNF131
TGFB2
GBP4
FXN
DNAJC9
POLR2J
RTL10
GNB1L
NBN
ASNSD1
ASDURF
PTPRA
PLEKHA1
DCAF1
CHMP7
DAGLB
CCDC92
ZNF664-RFLNA
ZNF664
KCTD6
SLC4A4
RBPJ
ITPK1
MSH5
CLIC1
SOAT1
FRYL
KIAA0930
ZDHHC12
GNAI1
NSG2
INTS6
TK2
MSANTD3
FUT11
FRMPD4
CKLF-CMTM1
CKLF
C3orf86
NCOA7
ANKRD13D
RAN
TMEM63B
MRPL14
KHDRBS1
IGFBPL1
REV3L
TNFSF12-TNFSF13
TNFSF12
RNF227
SELENOF
HS2ST1
NANOS1
MYPOP
MOCS2