ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976672 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◣ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L8
IKZF3
MYEOV
MTRNR2L2
MSH3
DHFR
TES
GRB7
ARID3B
TMEM199
POLDIP2
CRBN
MTRNR2L1
TOMM22
ERAL1
GRHL2
RGPD2
RGPD1
POLR2J3
CD300LF
TXNRD1
UBE3B
SFSWAP
STARD3
STAT6
PGAP3
ERBB2
MRPL45
GET3
PSMD3
MTBP
MRPL13
UNC13D
TRA2B
RBM48
PEX1
SLC45A4
ISY1-RAB43
ISY1
RBBP8NL
TSR3
GNPTG
VPS50
HEPACAM2
ESRP2
HEXA
CARD16
SPAG16
HES1
SEMA3B
KAT8
LZTR1
GFM1
POLR2J2
TXN2
POLR2J
CD55
CYP2A13
UBE2I
SOCS2
YAP1
SLIRP
ALKBH1
TOP3A
SMCR8
PDAP1
BUD31
SUPT7L
SLC4A1AP
IL1R1
APOBEC3B
MRPS15
SUPT6H
SDF2
C1orf174
MOCS3
DPM1
SRI
LAMP1
TMC7
ERICH4
DMAC2
ATP5MF-PTCD1
ATP5MF
PSMD1
NAGPA
TRIB1
AXL
MRTO4
EMC1
RPTOR
UPK3B
SAP30BP
RECQL5
GLTP
THAP7
MED6
ERCC1
SLC25A45
FRMD8
RPL23A
RAB34
C8orf33
SLC35B1
CCDC97
STX16
GSR
LRRC47
SPATA25
NEURL2
CTSA
ZNF335
TRMT2A
RANBP1
TET3
PHAX
ATG9B
ABCB8
ELFN2
C19orf33
TAS1R1
NOL9
DDX23
EIF3H
MIEN1
SALL4
RBBP5
IDH3B
UVRAG
SUMF1
RTF2
ATG14
NGDN
EXOSC5
BCKDHA
NCBP2AS2
NCBP2
ZNF383
DNAJC11
DOHH
TRAF4
ELP3
POLR3F
DZANK1
ZNF408
ARHGAP1
MTRNR2L9
RHOD
HS3ST6
UBQLN1
ANGPTL4
DUSP2
ZNF830
CCT6B
C16orf91
PPWD1
CENPK
LTO1
TMEM258
FEN1
SPINK1
MRPL10
LRRC46
RARB
TMEM208
LRRC29
FAM162A
CCDC58
RCE1
TSFM
ECHDC1
NOL8
CENPP
TLE3
PALB2
DCTN5
ZZZ3
MMP13
HAGH
FAHD1
MAN2C1
NKD2
NOM1
SEPTIN9
PSMG2
CEP76
KMT5B
C5orf51
CDKAL1
ZBTB7C
JMJD7-PLA2G4B
JMJD7
ZGPAT
ARFRP1
SAMD10
PRPF6
PSMB7
IRF2BPL
NDUFA2
IK
BCAS1
TCTEX1D4
BTBD19
STYXL1
SENP5
PLA2G2A
RPS26
SLC25A53
ZNF165
RDH5
ITGA7
BLOC1S1
U2SURP
SEC61B
ALG2
INO80D
SPNS1
CASC3
RARG
TATDN3
NSL1
SMN2
SMN1
SUPV3L1
TBRG4
DDX46
DIABLO
BHLHE40
YJU2
NAPB
SART3
ISCU
WASHC5
NSMCE2
GABRR1
LIPK
SQSTM1
ZNF2
VPS52
RPS18
TXNL4B
DHX38
SENP1
PFKM
RIN1
TRMO
TPRN
TMEM203
NDOR1
BRPF1
FUT1
FGF21
GADD45A
NVL
METTL2A
CENPBD1
RAE1
RAD9A
BRWD1
FASTKD2
SNRPE
TPST2
UBE2M
CHMP2A
TMEM40
PRKRIP1
MB
VIRMA
NDUFA9
AKAP3
TRIQK
NCAPH2
LMF2
PFDN1
APOBEC3H
SLC39A9
ERH
BIRC3
ZNF17
MRPL58
TFPT
PRPF31
GSN
TRUB2
COQ4
DPP3
CCDC174
USHBP1
BABAM1
NUP107
TJP2
REEP4
SF3B3
COG4
SEMA5B
REXO1
NR1H2
CEP162
ZNF576
IRGQ
MAP3K7
NSA2
GFM2
DERL1
ZSCAN25
EPHB3
EPS8
OAZ3
MRPL9
OXNAD1
DPH3
SLPI
RNF39
CCDC124
ANXA2
HUS1
NOTCH3
ORAI3
PTP4A1
SERPIND1
THUMPD1
RAPGEF3
MED23
MRPL53
PPIL4
ARMC1
CCDC59
FAIM
WDR53
FBXO45
ZSCAN22
KLF9
TRMT1
NACC1
PSME3
DGAT2
SLC39A4
CPSF1
API5
NUP214
MRPS7
GGA3
TSN
SF3A3
RRNAD1
ISG20L2
NOC2L
KLHL17
LGALS8
WDR24
STX1A
EDARADD
GTPBP4
CBLL1
VGLL4
GPATCH3
STMN3
RTEL1
ATG101
ABT1
VAC14
FAM222B
ASB2
MTUS1
LRFN4
PUM2
NOL11
UBIAD1
UPP1
CCNT1
DNAH5
LAMTOR1
BMS1
FOS
SCARB1
DDX49
COPE
ENOSF1
SMPD4
MZT2B
SKIL
CDC6
FAM83A
DNAJC30
BUD23
SEC13
COMMD2
MAPKAPK5
ERGIC2
ZG16B
AMN1
MRPL38
CLPTM1
PRSS22
FLOT2
MRPL3
SETD1B
ZNF461
GATB
GCN1
BCL9L
RPL26L1
TMUB1
FASTK
CLDN4
NOL10
NUP85
FUBP3
COLEC11
NBEAL2
SART1
CCDC12
MRPL12
GPD1L
EIF2D
PTPRR
RWDD1
CDK12
CCDC88B
ABCC10
ANKMY1
RNPEPL1
PLEKHH2
PPP1R37
TPD52L2
ABHD16B
FBXW2
CD36
ALKBH3
PSKH1
CDKN2AIPNL
KMT5C
GTF2IRD2B
HTRA2
DQX1
ICE1
TRIP4
ZCCHC4
PDRG1
PSG9
CZIB
KRR1
C7orf65
FADD
MFN2
OSCAR
NDUFA3
PSMD7
DOK7
SMG8
NDUFB5
MRPL47
XAB2
PCP2
CNPY2
TOMM6
ZFYVE26
RAD51B
CGGBP1
C3orf38
TIMM22
NFKBIA
AP5Z1
OBSL1
INHA
WDR97
MAF1
SETD3
CCNK
MAD2L1BP
UQCRQ
GDF9
BIRC2
PRR3
GNL1
VPS33A
DDX41
ZNF507
PHB2
KAT6A
PNO1
PEPD
TIMM23
FOXS1
IL1RN
ZBTB45
CMIP
GTF2H3
EIF2B1
SMIM12
PUS10
PEX13
TFAP2C
MRPL21
IGHMBP2
KLK6
PCYT1A
EPPK1
METTL17
NOP58
TMED2
CDK11A
NIBAN2
TM4SF4
EIF2S1
ATP6V1D
SNRPC
ZNF668
MRPS11
MRPL46
INTS1
ZNF646
ZNF256
PLD1
DHRS3
COX16
AGTPBP1
MEAK7
TBL3
PARG
D2HGDH
DUSP6
LMAN2
KYNU
FAM187A
EFTUD2
CCDC103
ADAMTS16
TTI1
RPRD1B
COPS8
ZFP62
GPC1
RALGDS
ARID2
BCAR1
SLC7A6OS
PRMT7
TRIM16L
COPS7B
NFKBIZ
CD63
ATF3
ATP6V1H
C8orf74
SNRNP200
LRATD2
SUGCT
MPLKIP
TCERG1
PISD
PSG5
PLXNB2
TUBD1
RPS6KB1
BIN3
IER3
FLOT1
CACTIN
SERPINH1
C5orf15
TAGLN2
NUS1
DIDO1
PEX26
GID8
VEGFA
PPAN-P2RY11
PPAN
ANGPTL6
OST4
BANP
MYLIP
NDUFAF5
ESF1
MAGOH
TMEM123
PARP4
PMPCB
TMEM207
PIK3C2B
CDK5RAP2
RARS1
GJB5
GJB4
CLDN24
CLDN22
FAM200A
SAMM50
TBL1X
MCM7
AP4M1
SRP68
GALR2
RAD51AP1
C12orf4
PLEC
GTF3C5
TPGS1
FOSB
TRIM4
CLCF1
CASP8
CSTF1
AURKA
GOSR2
PIM3
MDM4
YIPF3
POLR1C
TFIP11
PRCC
CDK11B
P3H4
FKBP10
EIF2B2
ECH1
EIF1AD
BANF1
TMEM147
RRP36
MEA1
CTNNBL1
FSCN1
HOXA3
BBS1
SRD5A1
RBM22
ZNF524
FIZ1
SSNA1
ANAPC2
KRT17
TEKT2
ADPRS
NPAS2
EXOC3L1
E2F4
COA8
BAG5
ZNF142
BCS1L
DGCR6L
DHRS13
NMNAT1
LZIC
S100A11
SH2B1
MRPL1
INKA2
DDX20
RAMAC
MORF4L1
ALDH3B2
PAN2
IL23A
TSC22D4
NYAP1
PHF23
ALDH18A1
PDXK
HNRNPA2B1
CBX3
GET4
SLC39A10
EPC2
WDTC1
DDX17
EIF4G2
NUDT3
STRBP
SLC25A25
NAIF1
GABARAP
SEPTIN7
WASHC2A
KAT5
WASF2
WASHC2C
UBE2Q1
DUX4
GPR137
BAD
MARCHF9
CDK4
GSK3B
ATP6V0D1
AGRP
RSF1
AAMDC
MSMO1
RPGRIP1L
FTO
DAGLA
FRG2C
MDM2
BCL3
EFNA3
SYNGAP1
CUTA
MTHFR
ZBTB7B
CLCN7
SMARCD2
FRG2
USP49
DDX42
CCDC47
SRSF1
RPUSD4
FAM118B
GBA
ILF3
SERPINI1
PDCD10
COMMD9
CLCN6
MAN1B1
ATP6V1G1
MACC1
RHOBTB2
PTPRF
FAM72C
IRF2BP2
SRGAP2B
FAM72D
OSGEP
APEX1
SLC35A5
ATG3
PGLYRP4
MCOLN1
FANCA
AURKAIP1
PDGFB
SRGAP2
FAM72A
RGS3
XPO7
KMT2E
CLN3
APOBR
HPS5
GTF2H1
INO80C
TMEM205
RAB3D
CCDC159
PRICKLE1
ENTPD4
MYCL
MFSD1
PPP6R1
LAMA3
NME1-NME2
NME1
SLC4A2
CDK5
DVL2
PAXBP1
SHLD2
GLUD1
PCIF1
UBE3C
ZDHHC6
VTI1A
AMDHD2
ST7
ARHGAP32
WWOX
CELA3B
SLC25A11
RNF167
ATAD2
PMS1
ORMDL1
SMG7
STAU2
MEF2C
DIP2A
ITFG2
MEMO1
TM2D2
ADAM9
PTBP1
GTPBP6
PMF1-BGLAP
PMF1
SUSD4
SUMO3
UBE2B
CDKL3
PIP4P1
CLSTN1
MAMDC2
SEPTIN5
GP1BB
INTS10
SH3GL1
CHAF1A
KLF10
WBP2
E2F6
ZMYND8
LIMA1
NDUFA4
SPRED2
LANCL2
ANKS6
UBAP2L
C1orf43
SSBP1
ADGRB3
MOB1B
THOP1
SGTA
COL23A1
MIER1
DAZAP1
CALML5
ARID5B
RRP15
HNRNPH2
TNC
KANSL3
FER1L5
SLK
SRGAP2C
KCNMA1
FAM72B
FGGY
ACVR1B
SUMO2
TPP1
ALG6
THEMIS2
HM13
SCAMP5
BSG
KDM7A
WDR62
THAP8
OTUD7A
SSH1
THRAP3
USP30
XRCC5
ETV4
SLC33A1
ADAM23
NGB
SPATC1L
STX6
TBC1D30
GNS
SMARCA4
BAIAP2
RAB3IP
LARP1
FLYWCH1
TMEM116
ERP29
ADGRL1
VPS11
ITGB3BP
EFCAB7
MEOX1
RABGAP1L
IGLL5
TIPARP
EIF5A2
SLC6A9
BLOC1S4
B4GALT2
ATP6V0B
DENR
PPP5D1
CALM3
TNNC2
SNX21
PRMT3
PMEPA1
NUDCD3
DICER1
NFE2
BAX
PEAK1
HMG20A
ZNF497
RXRA
SBK1
NSD1
SPHK2
RPL18
FAM83E
PARD6B
SKIDA1
STRA6
KDM3A
QRICH1
NOXO1
GFER
TCAF2
NPEPPS
RPS11
SCYL3
RMND1
ARMT1
PSMD5
EIF3F
TNPO3
TEX46
PLAGL1
KDM1A
AP2A2
PHF19
GPRC5A
TFDP1
VWA7
TGIF1
LPCAT3
GRHL1
NDUFAB1
TMEM18
LYPLA1
NOP16
HIGD2A
CORO7
METTL1
EEF1AKMT3
CYP27B1
HDAC6
CBX7
SAP30
BAHCC1
ATP6V1C1
PRKCA
NEXN
LSG1
UBE2E2
BAG6
APOM
SFXN1
RRAGC
KDM4C
RARA
GRIN2D
FASN
NDUFS7
MAZ
NR5A2
NAPA
SPTAN1
RNF223
PRAME
LUC7L2
CRYAA2
CRYAA
TMEM59
HSPB1
SYNCRIP
KRT80
TSC1
SERP1
GFI1B
EIF2A
STON2
PDCD6IP
MKLN1
NUF2
BNIP1
ARID1A
TMCC3
PYCR2
HOOK2
TTC32
CHD7
UBE2L3
TMCC2
PLEKHF2
HOXC13
MINDY2
FBXL3
DNPEP
ST6GALNAC1
CAPRIN2
C17orf58
MAN2A2
CHIC2
LFNG
CACNA2D2
CHMP7
NFU1
MARVELD1
DRC7
USP28
PHF21A
MYL12A
ACTN4
RTN4