ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976675 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◣ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
MTRNR2L8
GRB7
ARID3B
TES
SLC45A4
TMEM199
POLDIP2
MTRNR2L2
MSH3
DHFR
SFSWAP
ERAL1
MTRNR2L1
ASB2
CD300LF
STARD3
RBBP8NL
IL1R1
C8orf33
CRBN
UBE3B
TOMM22
RAPGEF3
NAGPA
ABCC10
TXNRD1
VIRMA
STAT6
RBM48
PEX1
TSR3
GNPTG
GLTP
GRHL2
C1orf174
GSR
APOBEC3B
SALL4
BHLHE40
TRIB1
SLC35B1
ELFN2
PSMB7
PSMD3
IER3
FLOT1
MMP13
MRPL45
POLR3F
DZANK1
IDH3B
ZBTB7C
MIEN1
MOCS3
DPM1
SQSTM1
RGPD2
RGPD1
LAMP1
PHAX
SENP1
PFKM
CYP2A13
EIF5A2
EIF2D
SUPT6H
SDF2
CD55
YAP1
ATP5MF-PTCD1
ATP5MF
FLOT2
SOCS2
DNAJC11
ANGPTL4
IRF2BPL
SPNS1
THAP7
SPATA25
NEURL2
CTSA
POLR2J3
RARB
UNC13D
KAT8
SPINK1
GATB
ESRP2
TET3
SAP30BP
RECQL5
RTF2
TMC7
GPRC5A
SEMA3B
TMEM207
PSMD1
MTBP
MRPL13
CCDC59
TRMT1
NACC1
TFPT
PRPF31
HES1
PLAGL1
CDKAL1
SERPIND1
TRAF4
VAC14
LZTR1
MRTO4
EMC1
FAM98B
ZNF335
ZMYND8
ZZZ3
EPYC
SIGLEC15
SKIL
UPP1
SUMF1
POLR2J
CLPTM1
LANCL2
SLPI
SUPV3L1
ZBTB45
MLX
COASY
RARG
CARD16
AAAS
ZNF383
SLIRP
ALKBH1
MARVELD1
HAGH
FAHD1
CENPBD1
EPS8
SYT12
ISY1-RAB43
ISY1
UBE2I
RPTOR
SLC25A45
FRMD8
HEXA
FAIM
KLF9
SRI
ATG14
LTO1
ERICH4
DMAC2
SMG7
SUPT7L
SLC4A1AP
PLD1
REEP4
DPP8
PGAP3
ERBB2
ACP3
TRA2B
TOX2
RBBP5
SEPTIN9
GET3
NGDN
SART3
ISCU
GADD45A
DDX41
ABT1
TRMO
BCL3
ELF3
NUP214
TMEM205
RAB3D
CCDC159
C16orf91
PMEPA1
ZFYVE26
RAD51B
LAMA3
SPAG16
ATF3
ID1
TXN2
BIRC2
AXL
UVRAG
RHOD
SLC25A53
TMEM41A
STARD4
MTRNR2L9
SLC25A51
SLX4IP
MKKS
TGFA
RAD51AP1
C12orf4
ST6GALNAC1
TRMT12
ELP5
CTDNEP1
SMN2
SMN1
TRIQK
CCND3
TAF8
ERCC1
ZNF408
ARHGAP1
RRP15
BCAS1
SAMD10
PRPF6
EDARADD
SGMS2
RPS16
LSG1
EXOC3L1
E2F4
NDUFA2
IK
KLF10
ANKMY1
RNPEPL1
UPK3B
KRR1
LIMA1
FEM1A
MEST
ZCCHC4
PDAP1
BUD31
DHRS13
DGAT2
RPS26
RGS3
GFM1
LRRC23
RAB40C
KMT5B
MTA3
KCNG3
RAE1
TOP3A
SMCR8
ZSCAN25
ATAD2
BANP
STX6
PLEKHH2
NCAPH2
LMF2
ZBTB7B
STX1A
MRPL10
LRRC46
RCOR3
GPC1
SERP1
EIF2A
ANXA2
HSPB1
VPS50
HEPACAM2
ZNF576
IRGQ
TACC1
CSF3R
GTSF1L
RDH5
ITGA7
BLOC1S1
MRPS7
GGA3
UBALD2
CACTIN
MRPL1
NFKBIZ
LGALS8
MRPS15
FAM83A
TSN
FAM133B
U2SURP
SPRED2
MBD6
DDIT3
STMN3
RTEL1
UBE2L3
GCN1
TRABD
SMIM6
WASHC5
NSMCE2
ZDHHC6
VTI1A
MAMDC2
EPHB3
BIRC3
UQCC1
LOC102723996
ICOSLG
NVL
NCBP2AS2
NCBP2
MTUS1
SEMA5B
TPRN
TMEM203
NDOR1
STX16
LRRC47
PLA2G2A
CAPN14
ATF6
RASSF6
TSFM
HABP2
POLR2J2
IRF2BP2
HSPBP1
BRSK1
KCTD5
IKBKB
KLK6
PHB2
MAPKAPK5
AMN1
ANTKMT
PLEC
FOS
NDUFA9
AKAP3
LCN2
STON2
TMEM248
RRNAD1
ISG20L2
NUP155
ZSCAN22
TIGD5
EEF1D
INTS1
KYNU
GRWD1
TAS1R1
NOL9
SSNA1
ANAPC2
REXO1
TCAP
PNMT
PPARD
MYNN
ACTRT3
VCAM1
RAB3IP
PRSS22
HUS1
ZNF2
SMG8
RPS14
NUDT5
CDC123
LIPK
C5orf51
GSDMD
UPK3BL1
MAGOH
KMT2A
IP6K3
MLST8
CTNNA1
DNAJC30
BUD23
PPIL4
ARL14EPL
TCF7
CCNT1
KRT80
DNAJB12
PKP2
LRP6
KMT2E
CCDC88B
DDX46
SELPLG
IGF2BP3
RPEL1
PAXBP1
TMEM208
LRRC29
EIF3F
TIMM50
MRPL53
AQP5
HNMT
ALKBH3
ZFHX3
SLC39A4
CPSF1
DOK7
PUS10
PEX13
BAHCC1
BRPF1
DNAH5
FBXO32
ECHDC1
DPP3
GTF3C5
PMPCB
ZP3
LY6D
CCDC124
TBRG4
CCDC97
NAPB
TEFM
EFR3A
LRCH4
FBXO24
EFCAB14
MAP3K7
PDCD6IP
ORAI3
CCSER1
DUSP2
TTC32
SPINT2
BCL2L13
TPST2
SNRPC
ATP6V1E1
PLEKHA7
MED24
SEC13
PEPD
LSM14B
ENTPD7
NAALADL2
YJU2
UBQLN1
FANCD2
CDC42EP4
DPH7
CASC3
COPS7B
OR2W3
NUS1
HAX1
NR2F1
SLC31A1
FKBP15
ECH1
DHRS3
PRR3
GNL1
NOTCH3
TRRAP
LIN52
ALDH6A1
TRMT2A
RANBP1
ARID2
C19orf33
PTPRR
LFNG
ABCC3
RALGDS
PSME3
GJB5
GJB4
VPS52
RPS18
ZNF17
POMZP3
FAM184A
CBLC
RHOV
ING4
ZGPAT
ARFRP1
GTF2H4
MRPL27
EME1
CDC23
KPTN
NAPRT
MROH6
USP30
OAZ3
MRPL9
TTC31
CCDC142
MCM7
AP4M1
PFN1
ENO3
SOD2
MIDN
WTAP
SPRR2F
COA8
BAG5
CLCN7
BCAR1
MTIF2
TBC1D23
COQ5
KAT5
SF3B3
COG4
SERPINE1
CIDEA
CELA3B
VWA7
METTL2A
GOSR2
NSA2
GFM2
TAGLN2
WDR97
MAF1
SYT1
LY6E
C12orf73
TMA16
DYRK1A
KRT13
TRIP4
PSMG2
CEP76
TXNL4B
DHX38
MAP3K7CL
NDRG1
RABL2A
CCT8
TMEM18
CALM2
MCCC1
TIMM23
AURKAIP1
JMJD7-PLA2G4B
JMJD7
PPWD1
CENPK
TIPARP
ZNF497
LARP1
NOL8
CENPP
LRFN4
MAN2C1
MEAK7
SNRNP200
TRIM16L
SPHK2
RPL18
FAM83E
METTL2B
FAM162A
CCDC58
TRIM55
SREK1IP1
CWC27
GINS1
STAM2
SEMA6A
FBXL18
POU5F1
GPR39
PSMD12
METTL17
ERP27
PSCA
MED20
BYSL
MRPS35
ATP6V1G1
ZNF165
FSCN1
MED1
THUMPD2
SH2D4A
RFC4
DDX23
GABRR1
HSPA9
PRKG2
TMEM123
ZMAT2
TMEM230
DDB2
KMT2D
GRK7
BBS10
CDK12
ITFG2
RNF223
COX16
DENND2B
VPS11
TLE3
CORO1C
RAG2
IFTAP
SNRPE
MRPS11
MRPL46
NFKBIA
RPL37
PIM1
SLC12A4
SENP2
MRPL38
DDX56
VARS1
TOMM70
LNP1
PLPP2
MACC1
RARA
COMMD2
GOLGA3
C8orf58
CCAR2
PIGO
LRMDA
RP1L1
PRSS8
FCF1
AREL1
PRR15
TRIM56
SLC33A1
LGALS7B
LEKR1
LNX1
TACO1
PSG5
XAB2
PCP2
ALDOA
CLDN4
SNAI2
PSENEN
LIN37
CTDSP2
SLC2A4RG
LIME1
CDKN1A
PIK3C2B
MAP2K3
NUDCD3
LEO1
MUL1
ANP32A
NOTCH2NLC
GTF2H3
EIF2B1
CHRM3
SRFBP1
SERPINB2
TH
SSBP1
ATP6V1H
HR
CLDN24
CLDN22
FMN1
UBE2Q1
NAPA
MB
BRIX1
SUSD1
CD36
ZKSCAN2
STK19
DXO
PROCA1
FOXK1
NUP107
URM1
TMEM120A
IPO11
TRIM29
PHF5A
ACO2
TSC22D4
NYAP1
ZNF805
MME
LEP
SKIDA1
NDUFAB1
CRKL
HEMK1
C3orf18
CEP63
ANAPC13
ADAMTS16
ZNF703
STEAP3
PRKRIP1
HOXA3
RCE1
GLCCI1
GTF2IRD2B
KCNH8
TIMM9
KIAA0586
ATG9B
ABCB8
SCAF11
EIF2S1
ATP6V1D
TM9SF4
EMC4
SNIP1
DNALI1
FOCAD
ANAPC5
GGCX
ARHGAP32
ETV4
RAD52
ITPKC
COQ8B
CALML5
TFAP2C
ADPGK
ARF3
IBA57
WDR53
FBXO45
REXO4
ADAMTS13
ARFGEF2
POLE3
C9orf43
SLC7A6OS
PRMT7
MRPL4
ANKK1
NDUFS3
KBTBD4
PHF3
CXXC5
ADSS1
ORC4
MBD5
FNTB
KLHL32
UBE2H
CCZ1B
JRK
NDUFAF4
CLCF1
RWDD1
BMP7
TPGS1
NSFL1C
POP7
CCDC38
AMDHD1
TJP2
MRPS33
ZNF398
PARG
PDRG1
DDX49
COPE
OGG1
MPHOSPH10
MCEE
ALG10
GOSR1
SNRPD2
QPCTL
MAGEA3
COIL
LMAN2
FGD3
TPCN1
MUC20
ZSCAN21
RECQL4
LRRC14
UBE2C
TMEM40
NOP16
HIGD2A
ZNF623
NME3
MRPS34
EME2
PARL
RIPK1
XRCC6
DESI1
TINAGL1
TPD52L2
ABHD16B
TBCK
AIMP1
FLRT2
RPS27A
CLHC1
PLA2G2E
EVPLL
TAF6
CNPY4
SART1
DIDO1
GID8
MRPL20
KRTAP29-1
TMEM222
PLEKHG6
PPP6C
TNFAIP1
IFT20
NAMPT
CEP120
TMPRSS4
RNF139
GUCA2A
FAM110A
DNTTIP2
UNC50
COA5
NMNAT1
LZIC
PTPN2
DNAH2
ANKRD36C
MAPKAPK3
CISH
MRM3
GLOD4
SENP5
CSTF1
AURKA
HACD2
MRPL3
HES4
MYORG
C9orf24
BNIP1
CTTN
MRPS18A
PA2G4
C15orf62
KIAA0100
ZNF3
NR1H2
RASEF
STYXL1
KAT6A
LMNA
SETD1B
ZNF16
ZFPM1
TUBGCP6
ATP6V0D1
AGRP
CDK5RAP2
SZRD1
TMED10
PRR12
LYRM4
FARS2
TBCB
POLR2I
OVOL3
TUBA1C
HSD17B3
KMT5C
RABL2B
C6orf89
RBM27
FAM222B
TCERG1
NUP54
RFFL
ZNF302
PDE12
LZTS2
ANKRD36
PSG8
MRPS26
GNRH2
ERBB3
IQCG
EXOSC3
RPL35A
ASB6
TMEM95
KCTD11
SRRD
HPS4
C12orf43
HIF3A
FADD
KCNN4
NDUFB5
MRPL47
NEK6
ARID5A
ZNF256
TSEN34
MBOAT7
FAM149B1
ECD
TMEM234
EIF3I
ESRP1
METTL1
EEF1AKMT3
CYP27B1
BCL6
TTI1
RPRD1B
RPS21
WASHC2A
PADI4
SLC34A3
RNF224
CYSRT1
TBCC
BICRAL
VGLL4
ZRANB2
LENG8
SNRPD3
GUCD1
RHOT2
FXR1
MLIP
ZNF668
BBS1
RNF39
ZNF646
DENND2D
CDC6
SUGCT
MPLKIP
BCL9L
PROSER1
NHLRC3
ZNF629
RASA3
ARNTL
RPS29
LRR1
LAPTM5
EBPL
ZNF524
FIZ1
COMMD5
FOXN1
ZKSCAN4
KLHDC7A
STRA6
RNF168
TRMT61A
ANAPC7
SCARB1
IARS1
SERTAD4
ZNF543
PHF23
ALDH18A1
PDXK
HNRNPA2B1
CBX3
GET4
SLC39A10
EPC2
WDTC1
AP5Z1
DDX17
EIF4G2
NUDT3
STRBP
SLC25A25