ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976676 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◣ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
MTRNR2L8
GRB7
ARID3B
MTRNR2L2
MSH3
DHFR
SLC45A4
TMEM199
POLDIP2
TES
SFSWAP
ASB2
ERAL1
MTRNR2L1
RBBP8NL
UBE3B
RBM48
PEX1
RAPGEF3
NAGPA
GRHL2
STARD3
TOMM22
CD300LF
VIRMA
TSR3
GNPTG
STAT6
IL1R1
C8orf33
APOBEC3B
MMP13
TMC7
CRBN
BHLHE40
GLTP
ELFN2
SPINK1
TRIB1
C1orf174
TXNRD1
IER3
FLOT1
MIEN1
ABCC10
POLR3F
DZANK1
SALL4
CYP2A13
MOCS3
DPM1
LAMP1
YAP1
SLC35B1
PHAX
ZBTB7C
TET3
MRPL45
PSMD3
IDH3B
TRMT1
NACC1
THAP7
MTBP
MRPL13
SQSTM1
SPATA25
NEURL2
CTSA
CD55
KAT8
CARD16
SUPT6H
SDF2
DNAJC11
SOCS2
UNC13D
PSMB7
SPNS1
ZZZ3
POLR2J
FLOT2
LZTR1
RGPD2
RGPD1
ANGPTL4
EIF5A2
SLIRP
ALKBH1
CLPTM1
SERPIND1
POLR2J2
SAP30BP
RECQL5
RARB
VAC14
POLR2J3
EIF2D
ESRP2
HAGH
FAHD1
ZNF335
ATP5MF-PTCD1
ATP5MF
TRA2B
GATB
MARVELD1
CCDC59
SENP1
PFKM
SMN2
SMN1
CDKAL1
MRTO4
EMC1
SEMA3B
SMG7
LANCL2
CENPBD1
NAPB
ZMYND8
RBBP5
EPYC
PLAGL1
SGMS2
PGAP3
ERBB2
TMEM41A
GSR
IRF2BPL
GADD45A
SUPV3L1
ZBTB45
GET3
IKBKB
ZNF383
RTF2
SRI
TRAF4
FAIM
SLPI
PSMD1
PLD1
DPP8
FAM98B
SKIL
AXL
ANXA2
TOX2
ISY1-RAB43
ISY1
MRPS15
ID1
AAAS
UVRAG
ZSCAN22
RARG
REEP4
MTA3
KCNG3
SIGLEC15
SUMF1
ABT1
RRP15
MLX
COASY
C16orf91
DDX41
RAE1
HES1
UBE2I
TFPT
PRPF31
MAMDC2
RPS16
TMEM205
RAB3D
CCDC159
RPTOR
HEXA
LAMA3
ATG14
SYT12
TXN2
LSG1
GPRC5A
SART3
ISCU
RAB40C
ERICH4
DMAC2
UPP1
CACTIN
VPS50
HEPACAM2
NGDN
BIRC2
KLF9
LIPK
BCL3
NUP214
HSPB1
ATAD2
KRR1
MRPL10
LRRC46
RCOR3
ATF3
STX6
STX1A
DNAJC30
BUD23
TMEM207
SEPTIN9
SLC25A53
ZCCHC4
RGS3
ZDHHC6
VTI1A
LTO1
TRMT12
ACP3
SLC25A45
FRMD8
PMEPA1
BCAS1
ERCC1
LRRC23
SUPT7L
SLC4A1AP
TOP3A
SMCR8
BANP
ZFYVE26
RAD51B
CLDN24
CLDN22
STX16
PHB2
EXOC3L1
E2F4
DOK7
RALGDS
GFM1
WASHC5
NSMCE2
NDUFA2
IK
ZNF576
IRGQ
RAD51AP1
C12orf4
DUSP2
CSF3R
TRMO
U2SURP
ANKMY1
RNPEPL1
SERP1
EIF2A
SAMD10
PRPF6
RHOD
COPS7B
NCAPH2
LMF2
SPAG16
ENTPD7
TSFM
NUDT5
CDC123
KLF10
FOS
LGALS8
ZNF408
ARHGAP1
EPS8
SNRPC
SLX4IP
MKKS
ELP5
CTDNEP1
UPK3B
FAM133B
RPS26
MTRNR2L9
TMEM208
LRRC29
KMT5B
EPHB3
BAHCC1
DNAJB12
PRR3
GNL1
PRSS22
ECH1
SSNA1
ANAPC2
ELF3
NUP155
PKP2
PDAP1
BUD31
PAXBP1
EIF4A2
CCNT1
FAM162A
CCDC58
NAPRT
MROH6
TSN
DHRS13
TRIQK
TGFA
SEC13
NCBP2AS2
NCBP2
GPC1
PDRG1
CCDC88B
EIF3F
PUS10
PEX13
ST6GALNAC1
CD36
PPWD1
CENPK
PLEC
STON2
TTC32
TPRN
TMEM203
NDOR1
TMEM248
MAP3K7
LFNG
ZBTB7B
RDH5
ITGA7
BLOC1S1
LIMA1
NVL
TRABD
TRRAP
GBA
MRPS7
GGA3
NFKBIZ
COQ5
ZSCAN25
SPRED2
GABRR1
GINS1
DGAT2
NFKBIA
TH
LRRC47
HSPBP1
BRSK1
COLEC12
ZFHX3
INO80D
BIRC3
GCN1
FAM184A
CBLC
ENPP2
TBL1X
STMN3
RTEL1
SPHK2
RPL18
FAM83E
SEMA5B
PUM2
SLC25A51
ANXA3
TBRG4
TRIP4
PRKRIP1
URM1
MAGOH
PHF5A
ACO2
UBALD2
SMIM6
VCAM1
CASC3
HUS1
UBQLN1
OAZ3
MRPL9
UBE2L3
LRP6
NDUFA9
AKAP3
KYNU
MBD6
DDIT3
MCM7
AP4M1
EFR3A
KCTD5
KMT2E
VPS11
ATF6
RRNAD1
ISG20L2
PSG1
FEM1A
MEAK7
TPST2
POMZP3
TXNL4B
DHX38
KLK6
IP6K3
SNRPE
KMT5C
CAPN14
FAM83A
PDCD6IP
PLA2G2A
FANCD2
NOL8
CENPP
PLEKHH2
MAPKAPK5
KPTN
GTSF1L
RFC4
RPEL1
HNMT
SLC31A1
FKBP15
FSCN1
C2orf49
DPH7
TIMM50
GRK7
AMN1
ALG10B
SEMA6A
SUSD1
MLST8
ZNF2
MRPL1
SF3B3
COG4
GTF3C5
ANKK1
ELAPOR2
ORAI3
TIGD5
EEF1D
ANTKMT
PSENEN
LIN37
TAS1R1
NOL9
ARID2
MAN2C1
TEFM
ITPKC
COQ8B
HABP2
STEAP3
SERPINE1
KRT78
CELA3B
RARA
INTS1
RPS14
CCND3
TAF8
SLC39A4
CPSF1
PELATON
MED24
C19orf33
KRT80
REXO1
TCAP
PNMT
UQCC1
SHISA5
SMG8
CRKL
TNFAIP1
IFT20
CLCN7
CMIP
METTL2A
RBM28
CDC23
POU5F1
CMTR2
IRF2BP2
DDX23
DPP3
PTPRR
DHRS3
CORO1C
PEPD
SMYD3
DNAJA3
PLEKHA7
LOC102723996
ICOSLG
GSDMD
MRPL27
EME1
WDR97
MAF1
SLC2A4RG
LIME1
TRIM29
SLC12A4
POLE3
C9orf43
RIPK1
NOTCH3
GOLGA3
PFN1
ENO3
OR2W3
C5orf51
HSPA9
NDRG1
FLRT2
LRCH4
FBXO24
TRMT2A
RANBP1
NME1-NME2
NME1
GLCCI1
LY6D
ERP27
ZNF703
ATP6V1G1
MTUS1
TLE3
RIPOR3
KMT2A
TMEM212
SELPLG
MINK1
LY6E
TMEM127
CIAO1
ENOSF1
ECHDC1
PMPCB
GRWD1
IGF2BP3
NUS1
NR2F1
PSMD6
KRT19
NUDCD3
DNAH5
GOSR2
NSA2
GFM2
MRPL53
ZP3
ACSL1
PSCA
LEKR1
PRR15
TSEN34
MBOAT7
LIN52
ALDH6A1
AMDHD2
PSMG2
CEP76
GTF2H4
ALKBH3
PHF3
PIGO
WDR24
SNIP1
DNALI1
AQP5
MYNN
ACTRT3
ANKRD36C
SPINT2
VWA7
RWDD1
SREK1IP1
CWC27
PIK3C2B
LSM14B
KLHL32
CDK5RAP2
NDUFAF4
ARL14EPL
TBC1D23
ING4
ITFG2
ZGPAT
ARFRP1
SCAF11
ABCC3
MED1
MIDN
GJB5
GJB4
JMJD7-PLA2G4B
JMJD7
LARP1
TMEM18
COMMD2
SNRNP200
STARD4
MAP2K3
RHOV
KAT5
GTF2IRD2B
SYT1
SCAND1
RABL2A
MACC1
LMAN2
CEP63
ANAPC13
PPIP5K2
GIN1
BBS10
TSPAN3
ANK1
EXOSC10
REXO4
ADAMTS13
NR1D1
DDX56
MMP3
SSBP1
MRPS33
FCF1
AREL1
PPARD
ALG10
TMA16
HR
SPRR2F
PRSS8
AURKAIP1
ZNF17
TTC31
CCDC142
TRIM55
CTDSP2
CSRNP1
PITPNM3
FAR2
ETV4
TFAP2C
TMEM242
C7orf65
TM9SF4
TMEM120A
MEST
MRPS22
CXXC5
TRIM4
BCL2L13
PFDN1
ATP6V1E1
USP30
NDUFAB1
LRFN4
GUCA2A
ALDOA
TPD52L2
ABHD16B
SOD2
WTAP
GPR39
DUSP6
RFFL
ADSS1
SLC7A6OS
PRMT7
PSMD12
XRCC6
DESI1
CLDN4
BMP7
UPK3BL2
C12orf73
DDB2
TMEM40
HOXA3
TAGLN2
E2F8
FMN1
CALML5
SKIDA1
EIF1AD
BANF1
EVL
ZNF629
KCNN4
RNF223
BCAR1
PNKD
FUCA1
FGD3
ADPGK
PROCA1
COA8
BAG5
NDUFB5
MRPL47
RCE1
MED20
BYSL
CEP162
NUP107
METTL2B
RPL37
BRD3
RAD52
BTNL8
LEO1
UNC50
COA5
ADAM8
GTF2H3
EIF2B1
RBM19
EDARADD
TBCB
POLR2I
OVOL3
MTARC1
FAM222B
THUMPD2
MFSD10
GLIS2
ZNF805
UBE2Q1
ZNF497
VPS52
RPS18
PROSER1
NHLRC3
TPGS1
SH2D4A
NBPF12
SF3A3
EIF2S1
ATP6V1D
IPO11
HAX1
VARS1
NPIPB5
PYCR2
MB
TAF6
CNPY4
CCZ1B
MRPL38
PARL
SERPINB2
MMP10
TIMM23
HTRA2
DQX1
IGFL4
RP1L1
TMPRSS4
MCCC1
ZNF623
TRIM56
MRPL20
NAPA
TACC1
COMT
FAM110A
LRMDA
UBFD1
EARS2
XAB2
PCP2
FRMD7
RHOT2
MRPL4
ATG9B
ABCB8
CSTF1
AURKA
WDR53
FBXO45
SETD3
CCNK
SPATS2L
PSG4
ATP6V1H
BRPF1
EVPLL
HEMK1
C3orf18
PARG
UBE2H
STAM2
JRK
TSSC4
CERK
RECQL4
LRRC14
RNF128
TIPARP
LENG8
PERM1
PTPN2
KNTC1
TJP2
BNIP1
PPP6C
KLHDC7A
TOMM40L
APOA2
RAB3IP
LMNA
PIM1
USP54
CHRM3
ANAPC5
FBXL18
PLEKHG6
NMNAT1
LZIC
MRPS11
MRPL46
SH2B1
NDUFS3
KBTBD4
SART1
IGFL1
LYRM4
FARS2
SNAI2
NSFL1C
GFUS
PDE4DIP
FADD
JAG1
UBE2C
GBP3
PES1
BRIX1
PDE12
RASEF
EXOSC3
AFDN
CTTN
DNAH2
IVNS1ABP
SLC33A1
NOP16
HIGD2A
FBXO11
PSG8
TACO1
ZXDC
PADI4
PWP1
RNF139
EHF
SNF8
COIL
FRG2
TINAGL1
C8orf58
CCAR2
ZKSCAN2
MPHOSPH10
MCEE
ZSCAN21
CDK11B
RPS21
UBXN1
NR1H2
RASA3
PLA2G2E
NAMPT
ZKSCAN4
LAPTM5
CDC42EP4
LCMT2
C6orf132
ADAL
KAT6A
LGALS7B
MRM3
GLOD4
CLCF1
PSMD5
OPA1
ARFGEF2
SRRD
HPS4
GOSR1
DCUN1D5
STYXL1
TCERG1
SNRPD3
GUCD1
HIF3A
POLD1
PTP4A1
TBCK
AIMP1
ZNF3
PTCD3
POLR1A
DHX8
TMEM123
PA2G4
ARHGAP32
SUGCT
MPLKIP
ARID5A
OGG1
TUBGCP6
L3MBTL4
HBP1
TUBA1C
RNF39
SZRD1
TMED10
GPD1L
MYL12A
SCARB1
USP32
RFESD
ZC3H3
FASTKD2
UMAD1
SYVN1
ZNF302
PPAN-P2RY11
PPAN
ANGPTL6
UBOX5
FASTKD5
ZNF256
STPG2
CDKN1A
ARHGAP30
KRIT1
ANKIB1
ANKRD36B
COMMD5
ZNF668
ZNF524
FIZ1
METTL1
EEF1AKMT3
CYP27B1
ZNF646
PSD
FBXL15
IQCG
BCL9L
POR
RPL35A
BBS1
EBPL
CDC6
TBCC
BICRAL
ESRP1
KLHL18
KIF9
VWCE
SOAT2
IGFBP6
RPS29
LRR1
PHF23
ALDH18A1
PDXK
HNRNPA2B1
CBX3
GET4
SLC39A10
EPC2
WDTC1
AP5Z1
DDX17
EIF4G2
NUDT3