ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930121 | Acute myeloid leukemia
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◣ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX20532176: hESC H1

◢ SRX20532177: hESC H1

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

WASHC2C
HEXA
WASHC2A
AP5Z1
LAMP1
COMMD9
GET4
DMWD
SPDYE13
FIGNL2
LMO2
CYTH3
KAT5
RAD9A
STX1A
MMP9
EXT1
UBE2Q1
ATP6V0D1
AGRP
DGKZ
SUN1
KLF2
CYB561
PRAM1
CD82
CCL4L2
RNF149
MTHFR
CLCN6
MCOLN1
LUZP1
CLCN7
ARHGAP31
BPI
BAX
PHACTR3
ZNF595
TMEM104
NAT9
CD300A
DUX4
AOAH
NFX1
LMBR1
RPS6KA1
STAB1
LTB
LST1
ARID3B
IKZF3
MTRNR2L8
MYEOV
MTRNR2L1
MTRNR2L2
MSH3
DHFR
PHF23
ALDH18A1
GRB7
PDXK
HNRNPA2B1
CBX3
SLC39A10
EPC2
WDTC1
SLC45A4
DDX17
EIF4G2
NUDT3
STRBP
SLC25A25
NAIF1
GABARAP
SEPTIN7
TMEM199
POLDIP2
TES
WASF2
MRPL45
ERAL1
SPATA25
NEURL2
CTSA
ERCC1
POLR2J3
GPR137
BAD
FRG2C
MARCHF9
CDK4
HAGH
FAHD1
SFSWAP
SERPIND1
GSK3B
NAGPA
UVRAG
RSF1
AAMDC
SPATC1L
CD300LF
SPNS1
MSMO1
CRBN
RPGRIP1L
FTO
RGPD2
RGPD1
UBE3B
DAGLA
TRMO
GRHL2
RBBP8NL
RBM48
PEX1
MTBP
MRPL13
RALGDS
TXNRD1
PSMD3
SUPT7L
SLC4A1AP
MDM2
SKIL
SUMF1
RAE1
BCL3
SLC35B1
FRG2
EFNA3
SYNGAP1
CUTA
ZBTB7B
IL1R1
ZZZ3
HES1
SMARCD2
USP49
TOMM22
C1orf174
DDX42
CCDC47
SRSF1
RPUSD4
FAM118B
C8orf33
GBA
ILF3
STARD3
TRIB1
ISY1-RAB43
ISY1
POLR3F
DZANK1
SERPINI1
PDCD10
RBBP5
ASB2
SOCS2
ABCC10
MAN1B1
STX16
RAPGEF3
LZTR1
STAT6
TSR3
GNPTG
ATP6V1G1
MACC1
THAP7
ANGPTL4
POLR2J2
VPS50
HEPACAM2
ATF3
UNC13D
CD55
GADD45A
SEPTIN9
RHOBTB2
VPS33A
BHLHE40
RARB
APOBEC3B
ESRP2
PTPRF
FAM72C
IRF2BP2
SRGAP2B
FAM72D
SQSTM1
MIEN1
OSGEP
APEX1
ZNF335
SLC35A5
ATG3
PGAP3
ERBB2
YJU2
TBL1X
TMC7
TRMT2A
RANBP1
CCDC59
PGLYRP4
FANCA
PSMB7
POLR2J
CLPTM1
AURKAIP1
SUPV3L1
SUPT6H
SDF2
GSR
TET3
SNRPE
TFPT
PRPF31
CARD16
IDH3B
RPS26
LAMA3
TRA2B
PDGFB
RDH5
ITGA7
BLOC1S1
SPINK1
SMN2
SMN1
ERICH4
DMAC2
NUP214
SRGAP2
FAM72A
TBRG4
WASHC5
NSMCE2
MOCS3
DPM1
VIRMA
LGALS8
GET3
CYP2A13
ZNF408
ARHGAP1
ELFN2
C5orf51
ZBTB7C
SALL4
RGS3
XPO7
UPP1
KMT2E
CLN3
APOBR
TRAF4
MRTO4
EMC1
HPS5
GTF2H1
INO80C
SRI
PDAP1
BUD31
SLC25A53
TSFM
TOP3A
SMCR8
SENP1
PFKM
TMEM205
RAB3D
CCDC159
ANXA2
YAP1
CDKAL1
PRICKLE1
GLTP
SLC25A45
FRMD8
IRF2BPL
ENTPD4
MYCL
MFSD1
PPP6R1
ZNF165
SAP30BP
RECQL5
CASC3
ATP5MF-PTCD1
ATP5MF
NME1-NME2
NME1
DOK7
SLC4A2
CDK5
SLIRP
ALKBH1
DVL2
PAXBP1
TRMT1
NACC1
SHLD2
GLUD1
C16orf91
ZSCAN22
PCIF1
RARG
GTPBP6
TXN2
MMP13
U2SURP
CEP162
ZNF383
HUS1
UBE3C
ZDHHC6
VTI1A
SUSD4
AMDHD2
ST7
EIF2D
CDK12
ARHGAP32
FLOT2
TAS1R1
NOL9
WWOX
NGB
CELA3B
SLC25A11
RNF167
AXL
ZSCAN25
CCDC88B
BIRC2
ATAD2
PMS1
ORMDL1
MTRNR2L9
ZBTB45
SMG7
STAU2
GATB
MEF2C
GFM1
DIP2A
SPAG16
ITFG2
MEMO1
IER3
FLOT1
TM2D2
MRPS15
ADAM9
FAM83A
PTBP1
PMF1-BGLAP
PMF1
KRR1
SUMO3
UBE2B
CDKL3
TBC1D30
PIP4P1
RTF2
CLSTN1
MAMDC2
DDX41
DNAJC11
JMJD7-PLA2G4B
JMJD7
NUP107
ZNF668
VAC14
SEPTIN5
GP1BB
INTS10
TMEM40
PLAGL1
KAT8
SH3GL1
CHAF1A
NDUFA2
IK
KCNMA1
KLF10
WBP2
E2F6
ZMYND8
EPHB3
LIMA1
NDUFA4
SPRED2
PHAX
ZNF576
IRGQ
TRIP4
CCNT1
ARID2
LANCL2
ECH1
ANKS6
LRRC47
UBAP2L
C1orf43
SEMA3B
SSBP1
ADGRB3
MOB1B
CCDC97
THOP1
SGTA
COL23A1
MIER1
ATG9B
ABCB8
DAZAP1
CALML5
ARID5B
RAD51AP1
C12orf4
RRP15
PSME3
UBE2I
HNRNPH2
TNC
KANSL3
FER1L5
SLK
KLF9
SRGAP2C
FAM72B
TJP2
FGGY
FSCN1
ACVR1B
SUMO2
NGDN
BANP
TPP1
ALG6
THEMIS2
HM13
SCAMP5
BSG
PPWD1
CENPK
UBQLN1
KDM7A
WDR62
THAP8
OTUD7A
TRIM16L
SSH1
THRAP3
VGLL4
USP30
XRCC5
ETV4
SLC33A1
CMIP
BIRC3
ADAM23
NAPB
EPS8
C19orf33
CYP27B1
RPTOR
STX6
BMI1
GPATCH3
GNS
SMARCA4
MRPS7
GGA3
BAIAP2
RFX1
RAB3IP
ATG14
LARP1
ZNF2
FLYWCH1
TSN
PSMD1
DHRS13
TMEM116
ERP29
ADGRL1
VPS11
ITGB3BP
EFCAB7
MEOX1
CACTIN
ZNF524
RABGAP1L
IGLL5
FIZ1
ELP3
TIPARP
EIF5A2
ANKMY1
TMEM208
LRRC29
SLC6A9
BLOC1S4
B4GALT2
ATP6V0B
DENR
PPP5D1
CALM3
TNNC2
SNX21
ATP6V1H
PRMT3
PLD1
STMN3
RTEL1
HOXA3
PMEPA1
NUDCD3
DICER1
MAP3K7
MRPS11
MRPL46
NFE2
BCAS1
DUSP6
PEAK1
HMG20A
ECHDC1
ZNF497
RXRA
TMCC3
SBK1
FAIM
CRYAA
CRYAA2
NSD1
ZCCHC4
SPHK2
RPL18
FAM83E
PARD6B
SKIDA1
STRA6
KDM3A
QRICH1
NOXO1
GFER
TRUB2
COQ4
TCAF2
NPEPPS
RPS11
OAZ3
MRPL9
SCYL3
RMND1
ARMT1
NCBP2AS2
NCBP2
PSMD5
EIF3F
TNPO3
DGAT2
TEX46
KDM1A
AP2A2
PHF19
SF3A3
PLEKHH2
PRKRIP1
GPRC5A
TFDP1
DDX23
VWA7
TGIF1
RHOD
NOL8
CENPP
LPCAT3
LMAN2
GRHL1
PUS10
PEX13
NDUFAB1
TMEM18
LYPLA1
EIF1AD
BANF1
NOP16
HIGD2A
MTUS1
CORO7
DNAJC30
BUD23
METTL1
EEF1AKMT3
DDX46
DPP3
HDAC6
CBX7
SAP30
BAHCC1
ATP6V1C1
RNPEPL1
STYXL1
PRKCA
BMS1
NEXN
LSG1
UBE2L3
UBE2E2
COPS7B
BAG6
APOM
SFXN1
RRAGC
UPK3B
KDM4C
RARA
GRIN2D
FASN
NDUFS7
MAZ
PLEC
NR5A2
NAPA
SMG8
NVL
SPTAN1
REEP4
SEC13
RNF223
PTPRR
METTL2A
PRAME
MRPL10
LRRC46
SH2B1
LUC7L2
TMEM59
HSPB1
SYNCRIP
DHRS3
KRT80
TIMM22
TCERG1
LTO1
TSC1
SERP1
GFI1B
EIF2A
COX16
STON2
PDCD6IP
MKLN1
NFKBIA
NUF2
BNIP1
ARID1A
DUSP2
MRPL1
PYCR2
HOOK2
TTC32
TPRN
TMEM203
NDOR1
CHD7
ZNF507
BRPF1
TMCC2
ATG101
PLEKHF2
HOXC13
MINDY2
FBXL3
DNPEP
ST6GALNAC1
PRR3
GNL1
INTS1
SART3
ISCU
ZGPAT
CAPRIN2
C17orf58
ARFRP1
AGTPBP1
MAN2A2
CHIC2
ZNF830
CCT6B
LRFN4
LFNG
CACNA2D2
CHMP7
NFU1
MARVELD1
MAN2C1
DRC7
USP28
SAMD10
PRPF6
PHF21A
MYL12A
ACTN4
PSMG2
KMT5C
CEP76
RTN4
KDSR
TACC1
NDUFB5
MRPL47
WWP1
SF3B3
COG4
SSNA1
ANAPC2
AAAS
RNASEK
C17orf49
EIF3H
WNK1
BCAR1
EPB41
FEM1A
PTP4A3
BACH2
FZR1
FOS
FMC1-LUC7L2
FMC1
PATZ1
JMJD1C
CFAP206
RPS14
TFAP2C
IKZF2
WDR97
MAF1
FRMPD1
AIFM1
KMT5B
DTNB
CENPBD1
C3orf70
FAM133B
SMYD1
PLA2G2A
KLHL32
IGF1R
DNAH5
PES1
CSF3R
TINAGL1
KLHL12
LRRC23
SP2
METTL2B
COLEC12
USF2
HERC5
TLE3
SYT7
SLC1A7
KDR
CUTC
COX15
THAP6
NFASC
MEAK7
HSPBP1
BRSK1
SEC22B
GTF2H4
GABRR1
SCAF11
PHIP
GTF3C5
PRKCE
MB
WBP1L
TMEM239
CSTF1
AURKA
TBL3
S100A2
DPP8
ANKK1
NDUFA9
ATXN7L3
AKAP3
FAM222B
EIF2S1
ATP6V1D
ADCY9
VPS52
RPS18
UBXN2A
PLA2G2E
GSN
CHD1
SYNPO
HR
NOTCH3
GUCA2A
URM1
LASP1
UTP3
PTK2
ATXN7L2
ZCWPW1
MEPCE
SLC2A4RG
LIME1
XAB2
RBPJ
PCP2
MSS51
PXT1
KCTD20
FCHSD2
AFF4
ABCC3
ZNF217
TRIM67
RPL5
COMMD2
CABIN1
IFT140
CRAMP1
AUTS2
TMBIM1
CCDC174
SPRTN
EXOC8
ZNF17
TMEM41A
MAP3K1
MLX
HSPA9
COASY
TTC31
MARCHF2
CCDC142
C1QTNF1
SPG21
COMMD4
RBKS
BABAM2
TM7SF3
PSMA1
WDR53
FBXO45
FZD1
PTPN12
PPARGC1A
GCN1
EIF4A2
BRIX1
MGAT5
FAM162A
CCDC58
FAM98B
DNAJB12
ATG9A
ANKZF1
ABT1
SLC24A1
INTS14
OAZ1
ZNF3
TAOK1
GOLGA3
CPT1A
PHB2
MAPKAPK3
CDC6
TMEM266
KMT2D
ELF3
UPF1
TIMM50
GOSR2
ZMPSTE24
SCGB3A1
RPL23A
RAB34
TRIL
NR2F1
PTPRG
PKP2
ZBTB14
RCE1
ZC3HC1
APP
SEMA5B
MRPL21
IGHMBP2
EPYC
BCL2L13
LAMTOR1
CTBP1
INKA2
TRIQK
LCOR
ZNF77
OXNAD1
DPH3
TMEM242
CCNI
REXO4
ADAMTS13
TMEM167B
C8orf58
CSTF2
GPC1
CNPY2
MELK
ABCB10
TPST2
MAST2
LYPLAL1
GAB2
CCDC88A
AP3S2
CBX6
TANGO2
ZNF787
FBXL5
C19orf48
NDUFB3
MED23
FAM126B
ELAPOR2
GTF2H3
EIF2B1
KSR1
EXOSC5
BCKDHA
PRSS22
OPRL1
LKAAEAR1
CCAR2
SUGCT
MPLKIP
ZNF609
SGMS2
KAT6A
DIABLO
SLC4A1
PTBP3
RWDD1
MAPKAPK5
CORO1C
ZBTB18
MLLT10
RBM19
NDUFS3
KBTBD4
COLEC11
MRFAP1
REXO1
VIM
PMPCB
MAPT
SPPL3
NUDT4B
NFIB
ERGIC2
PRKAB1
MIDEAS
NSA2
GFM2
TMEM91
BCL7B
MED1
EIF4H
SLC8A3
OBSL1
NR1H2
INHA
PKNOX1
PNO1
SGO1
FKBPL
ATF6B
TMEM72
WDR74
SMCO1
PALLD
EDARADD
ARMC8