ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457145 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◣ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

ALDH18A1
PDXK
SLC39A10
WDTC1
DDX17
EPC2
HNRNPA2B1
CBX3
EIF4G2
PHF23
GABARAP
STRBP
SEPTIN7
SLC25A25
NAIF1
WASF2
NUDT3
GPR137
BAD
DAGLA
RSF1
AAMDC
GSK3B
MSMO1
RPGRIP1L
FTO
DDX42
CCDC47
USP49
FANCA
ARID3B
SMARCD2
SRGAP2
FAM72A
SERPINI1
PDCD10
XPO7
SRSF1
FAM72C
SRGAP2B
FAM72D
MAN1B1
PGLYRP4
RHOBTB2
MDM2
PMS1
ORMDL1
MTRNR2L1
MOB1B
AURKAIP1
FRG2C
DICER1
SRGAP2C
FAM72B
PTPRF
SERPIND1
WWOX
HDAC6
MAP3K1
ADGRL1
MEMO1
GTPBP6
NEXN
MARCHF2
DUX4
BACH2
DENR
CRYAA2
CRYAA
SLC6A9
PRAME
EPB41
INTS10
RFX1
SLC4A1
INO80C
PPP6R1
SSH1
PCNT
C21orf58
SEPTIN5
GP1BB
PYCR2
TANGO2
KANSL3
FER1L5
GYPB
WBP2
NOS3
ABCB10
XRCC5
CSTF2
VIM
E2F6
CAPRIN2
DRC7
NFE2
MACC1
SLC45A3
CFAP36
MAN2A2
NFU1
ZNF77
TMEM87B
CASS4
ZNF497
PRKAB1
TSPAN32
C11orf21
WNK1
ZNF451
VWA7
CDK12
KMT2E
P2RX6
TCP11L2
PHF19
POLR2J3
SYT7
THAP6
NUP214
PSMD5
BIRC2
H4C4
ALAS2
H2BC6
TRUB2
COQ4
ARID1A
TJP3
ZNF347
USP17L22
USP17L20
RTN4
DNAJB2
CLUL1
YJU2
UBE2L3
TMEM59
ZNF609
TRIM37
TRMT10A
MTTP
AIFM1
KIAA1586
FKBP8
SIRT1
SMCO1
RIPOR3
SUPT7L
SLC4A1AP
RPS11
RNF223
CMIP
BCL3
KAT5
WDR89
CEP43
NCAPD2
MRPL51
PRDX1
BCL7B
HSF5
SLC43A3
RNF217
NXT2
PAXBP1
SLC2A1
FRG2
NR4A3
UROD
HECTD3
ZBTB7B
ERMN
CASC3
ERCC6L2
FUT10
BRD7
PPIL2
TM7SF3
MED21
NOP16
HIGD2A
ADAMTSL4
CRB1
DIP2A
ZMYND8
RBBP5
ANKFY1
ZNF165
VILL
UFD1
CDC45
ERMAP
TMEM72
KDSR
FOXJ1
CRKL
EML2
NLGN3
PRPF38A
ORC1
CTBS
GUCA1B
NME1-NME2
NME1
THAP7
TUBGCP5
LYL1
CCDC88B
SCN9A
RAB33B
COQ10B
GTF3C2
ZNF335
CENPF
SPATC1L
UBE2F
IL1R1
ZNF408
ARHGAP1
GNB2
LZTR1
SLFN14
PDE4C
BTBD10
REXO4
ADAMTS13
PPP1R15A
PLEKHA4
NUF2
OBSL1
INHA
NARF
SDF2L1
FBXW11
STAT6
KCNH2
FABP6
TNPO3
FKBPL
ATF6B
ARF3
ARID2
PTMS
C10orf71
MLX
COASY
RINL
TRIM63
KRBA1
SUPV3L1
RPS26
ZNF391
YIF1B
KCNK6
PPOX
ZSCAN31
BNIP3L
ATAD2
KDM3A
GBA
PCIF1
ILF2
TBL1X
GYPE
DMAP1
SPAAR
FLVCR1
MRPL40
HIRA
ASIC4
IL1RL1
TOP3B
PLSCR1
TRIM69
YPEL4
ASXL1
HPN
ST6GAL1
FAM83A
BTNL10
RGL2
TSC1
GFI1B
SAMD4A
SELPLG
AP1G1
SPTBN4
BLVRB
BAG6
APOM
GOLGA8B
WASHC2C
NDUFS3
KBTBD4
MBD2
MED15
PUS7L
IRAK4
RPL12
LRSAM1
IQUB
SIRT4
SLC26A8
MAPK14
OSBPL5
ZZZ3
STK11
TUBE1
FAM229B
RRP15
ATP8B2
AQP10
NR1H3
ACP2
AJUBA
C3orf86
EPS15
HSP90AB1
SMG7
CA1
CCDC116
TFPT
PRPF31
ITGB3BP
EFCAB7
CCNI
ZSCAN30
PAFAH2
SLC25A37
MRPL48
NUP210L
DGCR2
NDUFS7
FOXN1
NCAPG
THEMIS2
LAPTM4B
CCNG2
SLC35E2A
RSAD2
LUC7L2
ZCCHC24
EGFL7
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ASCC1
ANAPC16
TIMM10B
ARFIP2
CLTCL1
IMPA1
RPS19
NDUFA2
IK
KLHL20
CDC5L
PLK3
AQP1
SZT2
MED8
SEC22B
PTCD3
POLR1A
FRMD4A
RPA2
SLC25A42
MICOS10-NBL1
MICOS10
TRIM35
PTK2B
C1orf226
UTP3
MFSD12
DIPK1A
RTBDN
MAST1
SLC6A19
ST7
KSR1
HTR4
CALM2
TRIM6-TRIM34
TRIM6
S100A13
CHTOP
GOLGA3
PPM1F
ARFGEF2
GABPB2
UCP3
SSBP1
MGAT5
NUP155
LRRC37A3
H4C8
COPB2
TAF10
C1orf159
ECM1
TMEM120A
NFKBIL1
DDX39B
ATP6V1G2
CCNC
PSPN
ALKBH7
AP1M1
CIBAR2
KRR1
DNAJB12
ALG14
PMVK
RBL1
RPS8
ZBTB45
SEC31A
TRAPPC9
CHCHD2
THAP9
CHSY1
LARS2
GET4
CSDE1
PPM1D
PISD
TMEM43
CHCHD4
MRPL45
SART1
SNAI3
PRDM11
NPL
OPRL1
LKAAEAR1
SPDYE14
SPDYE10P
SCAMP3
S100Z
UBE3B
ADARB1
TNFRSF1A
GAGE2C
GAGE2B
GAGE2A
SNRPE
MYL12A
WDR74
NBEAL2
IGF2BP3
SLC25A11
RNF167
CACTIN
TMEM18
ATXN7L2
GLIPR1L1
CAPS2
BSDC1
SS18
MRPS28
FBLN2
H4C5
KCNAB2
HERC1
MYBPHL
NDE1
MARF1
CCDC59
UBE2I
ST3GAL2
CCRL2
BSG
SPIDR
LENG9
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
TXN2
TRIP4
PIH1D2
NKAPD1
C8orf37
TAS1R1
NOL9
CPT1A
HMX3
TMOD1
ATP6V1F
ADAMTS14
TMEM107
BCAS2
IQCB1
EAF2
H4C3
H1-6
NRL
DCAF11
LIPC
KDM5C
GAS2L1
ECE1
PRR19
PAFAH1B3
MSANTD1
CEP85L
UBE2B
CDKL3
JMJD1C
TMEM242
MFAP3L
SS18L2
SEC22C
PUF60
FSTL3
PTEN
KLLN
ZNF474
NCOA4
ZNF444
MRPL27
EME1
TOM1L2
DRC3
KRT8
HMBS
ZP1
FCMR
CORO1C
CDKN1A
ACSF3
RBM26
ZNF555
THEG
ARMC8
TNFRSF1B
NTRK1
INSRR
TXNDC2
MRPS7
GGA3
MAD1L1
STX5
QRICH1
PTMA
RAP1A
UBOX5
FASTKD5
PPP4R3A
KMT5A
HYLS1
TSGA10IP
ZDHHC6
VTI1A
ATG101
PIK3R3
RNFT1
MDM4
PPIH
NR1D1
HEMGN
GATA1
KLF10
RBPJ
SPRR2A
TRIB1
SPRED2
CSTF2T
H1-0
GCAT
TARS1
PRRG2
NOSIP
PITHD1
FAM210B
RCCD1
TMEM167B
TRAPPC4
RPS25
YTHDC1
TTI2
DHPS
AP5Z1
SPNS1
TAOK1
PDE7A
RAB42
COX7A2L
ARL14EP
ARNT
CFAP298-TCP10L
CFAP298
DDIT4
TUBB
MDC1
GAL3ST4
HDAC8
SUPT5H
CRCP
POLR3F
DZANK1
ERICH4
DMAC2
PSME3
ZC3HC1
IREB2
PSMC5
FTSJ3
TTC21B
RABEP2
MRPL39
BPHL
CCDC97
GPATCH3
DGCR8
CLK3
HAPLN2
SDE2
GP6
DYNC2I2
HTR1F
RINT1
ZNF57
WNK4
PPP1R13L
POLR1G
ZMPSTE24
RPS7
WDR55
RPP25
SKIV2L
POLM
NELFE
SFSWAP
ATG9B
ABCB8
GTF2H4
CACYBP
SRCAP
LOC730183
MAP3K8
H3C13
H2BC18
CD33
KMT2D
TUBB1
PACSIN2
ITFG2
PXT1
KCTD20
RPL5
WDR83OS
WDR83
MAN2B1
MST1
THG1L
PDCD2L
FZD1
IFNAR1
TPR
ODR4
TIPIN
ZNF74
GYPA
SLC27A4
NCDN
KIAA0319L
MRPL10
LRRC46
FZR1
PFDN4
HNRNPH1
PRR5
ATAD3A
JOSD2
ASPDH
TNFAIP8
PPP4R3B
AHCTF1
SH3BGR
LCA5L
DPEP3
RHBDD1
TET3
TMEM69
GPBP1L1
RPL10A
SYCP2L
GCM2
WASHC2A
THRAP3
STAT3
HDAC11
ZMIZ1
NEK2
ERVH48-1
ATP8A1
HNRNPH2
SMG5
TMEM79
FDXACB1
C11orf1
USP54
TIMM17A
NRCAM
STRIP1
CBFA2T3
LDB1
MYO1C
MORF4L2
TSPAN1
P3R3URF-PIK3R3
P3R3URF
ANXA2
PRMT3
SRSF7
C6orf226
USP9X
HDC
RPL36
GET1
TRMO
EIF1AD
BANF1
TMEM248
RBM28
TCTEX1D4
BTBD19
H2AZ2
PARK7
GDAP1
CXXC1
UIMC1
ELOF1
EIF2D
ULK4
RPL37
XPC
LSM3
SCAND1
LSM2
IL13
CAB39
HUS1B
TNNI2
NIP7
COG8
BAHCC1
ORAI3
ATR
PIGQ
NHLRC4
PDE4A
SNX25
CFAP97
SLC25A53
CHD1
SNRPD3
GUCD1
TUT1
TMEM168
NADK
GAS8
DBNDD1
SLC34A1
RNPEP
VPS33A
SPACA6
DHH
MRPL21
IGHMBP2
SLX1B
SLX1A
BOLA2B
BOLA2
SHB
SRFBP1
ALDH3B1
FAM156B
FAM156A
SULT1A4
SULT1A3
HSPBP1
BRSK1
MTERF1
MYL6
ALOX12
DHDDS
NFYC
PROCA1
DHDH
C4BPB
MCOLN1
SETD1A
RBSN
PAK1IP1
C6orf52
PLA2G6
TIMM44
C2orf42
TNFSF9
PTGS1
TTC32
ST6GALNAC1
ZCCHC14
VMAC
NDUFA11
CYTH2
EBNA1BP2
CFAP57
LOC388282
RALGDS
PMF1-BGLAP
PMF1
MRPL54
APBA3
TTC26
FAM200B
AKAP1
NMNAT1
LZIC
ZNHIT1
PLOD3
PXK
POLR2J2
KLHL32
HSPA9
DCAF10
POLDIP3
ALG1
EXD1
CHP1
RHOT1
SSR4
IDH3G
C5orf51
SH2B1
NPAS4
ETFB
LRIG2
UQCC2
POTEE
TBRG4
NDUFAB1
PLS1
CTR9
YIPF2
TIMM29
TMIGD3
ADORA3
ZYG11B
NOP14
GRK4
SLC2A12
KLHDC8B
CCDC71
ERAP1
ZNF180
DPYSL5
SLC35C2
DDX41
PSMC3
NBPF1
ZNF561
ZNF510
STXBP4
COX11
DNAJC28
ZNF696
SLC12A9
ZNF280A
SH3D21
BMS1
BOLA2-SMG1P6
GPBP1
SPAG9
SPRING1
RNFT2
POC5
CD248
GADD45A
MRPS15
PEAK1
HMG20A
LMAN2
METTL1
EEF1AKMT3
CYP27B1
FMC1-LUC7L2
FMC1
IFT140
CRAMP1
CCNL1
UMAD1
RAB36
RAB11A
BCKDK
RAB5A
EFHB
RSPH14
NOL4L
TMEM205
RAB3D
CCDC159
NUP107
METTL2B
COMMD4
C19orf48
TRIM67
SLC35A4
APBB3
RTL10
GNB1L
TMEM209
SSMEM1
WRN
PURG
TBX1
MAP10
RAPGEF2
PEX3
ADAT2
SETDB1
RFC2
NEU1
VAMP5
CLPB
PNISR
CNOT2
ABCF1
THUMPD3
PRKAR1B
ANO10
ABHD5
H4C11
C2orf88
NME7
BLZF1
CEP162
UTP18
MBTD1
HIPK3
WBP1
INO80B
UBP1
PHPT1
MAMDC4
UNC93A
MRPL1
COMT
ISG20
AGBL3
NUFIP2
RFXANK
BORCS8
TBC1D15
NFATC2IP
SLC25A1
DHX9
CMKLR1
IGLL5
LPCAT3
SMG8
S100A2
MARCHF7
MAPK1
HIKESHI
PTPN4
CPQ
CD2BP2
RPS14
TMEM222
SEC24C
KIAA1191
ARL10
FLNC
EVI5
ERCC1
TSFM
ZNF576
IRGQ
MTIF2
TMEM191C
TMCO1
CDIPT
GNAI3
CLP1
ROBO3
PRCP
DDIAS